Pregenerated sensors for LINC02583 (Homo sapiens)

Ensembl gene IDs: ENSG00000187600

Ensembl transcript IDs: ENST00000415396.3, ENST00000416466.2, ENST00000449601.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CGTGTGCTCCTGGAGGCTTTGAAGTTTGTTCTGCATCACTTTCACTaGCCTGTGTTAGGTCCACTCAGATGCTTTTCCCAGCACAGAAAA	+
Preference number: 5 (lower is better) Translates to: RVLLEALKFVLHHFH*PVLGPLRCFSQHRK Trigger: TTTTCTGTGCTGGGAAAAGCATCTGAGTGGACCTAACACAGGGCAGTGAAAGTGATGCAGAACAAACTTCAAAGCCTCCAGGAGCACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415396.3
CDS TCA 90 bp	AGCCTTGTTCACAGTTGCATAATGTGTGAGCAGTTCGGAGTTGAATaGAATACTCCTCTTTGGAGAGCTAGGTTGTTTCTGTTCATTTCC	+
Preference number: 5 (lower is better) Translates to: SLVHSCIMCEQFGVE*NTPLWRARLFLFIS Trigger: GGAAATGAACAGAAACAACCTAGCTCTCCAAAGAGGAGTATTTCATTCAACTCCGAACTGCTCACACATTATGCAACTGTGAACAAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415396.3 ENST00000416466.2 ENST00000449601.5
CDS TCA 90 bp	AATGTCACAGTTTCTTGGAATCAGAGCTGGTCTCCTAGAGTTGACTaGTATATGATCAGTTCAGTTGAAGTTTCCAGTGGTGGTTTGGGA	+
Preference number: 5 (lower is better) Translates to: NVTVSWNQSWSPRVD*YMISSVEVSSGGLG Trigger: TCCCAAACCACCACTGGAAACTTCAACTGAACTGATCATATATCAGTCAACTCTAGGAGACCAGCTCTGATTCCAAGAAACTGTGACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415396.3
CDS CAA 72 bp	GTTCATTTCCTGAGGTCACGTGTGCTCCTGGAGGCTTaGAAGTTTGTTCTGCATCACTTTCACTGCCCTGTG	+
Preference number: 6 (lower is better) Translates to: VHFLRSRVLLEA*KFVLHHFHCPV Trigger: CACAGGGCAGTGAAAGTGATGCAGAACAAACTTCAAAGCCTCCAGGAGCACACGTGACCTCAGGAAATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415396.3 ENST00000416466.2 ENST00000449601.5
CDS GCA 72 bp	CATCACTTTCACTGCCCTGTGTTAGGTCCACTCAGATaGTGTGTAAAGGTGACTGTGTTTTACTCTTCTCTG	+
Preference number: 6 (lower is better) Translates to: HHFHCPVLGPLR*CVKVTVFYSSL Trigger: CAGAGAAGAGTAAAACACAGTCACCTTTACACAGCATCTGAGTGGACCTAACACAGGGCAGTGAAAGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416466.2 ENST00000449601.5
CDS TCA 72 bp	CACAGTTGCATAATGTGTGAGCAGTTCGGAGTTGAATaGAATACTCCTCTTTGGAGAGCTAGGTTGTTTCTG	+
Preference number: 6 (lower is better) Translates to: HSCIMCEQFGVE*NTPLWRARLFL Trigger: CAGAAACAACCTAGCTCTCCAAAGAGGAGTATTTCATTCAACTCCGAACTGCTCACACATTATGCAACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415396.3 ENST00000416466.2 ENST00000449601.5
CDS TCA 72 bp	AATAATGATCACGTTGCACCTGAAGTGTTTTATTCCTaGTCACACTGGTGGGACTTCTTTTCCCAGCACAGA	+
Preference number: 6 (lower is better) Translates to: NNDHVAPEVFYS*SHWWDFFSQHR Trigger: TCTGTGCTGGGAAAAGAAGTCCCACCAGTGTGATCAGGAATAAAACACTTCAGGTGCAACGTGATCATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449601.5
CDS TCA 72 bp	GTTTCTTGGAATCAGAGCTGGTCTCCTAGAGTTGACTaGTATATGATCAGTTCAGTTGAAGTTTCCAGTGGT	+
Preference number: 6 (lower is better) Translates to: VSWNQSWSPRVD*YMISSVEVSSG Trigger: ACCACTGGAAACTTCAACTGAACTGATCATATATCAGTCAACTCTAGGAGACCAGCTCTGATTCCAAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415396.3
CDS CAA 72 bp	CACTTTGCAAAGGGGGTAATTGGCTTCACAGAACCTTaGAATAATGATCACGTTGCACCTGAAGTGTTTTAT	+
Preference number: 6 (lower is better) Translates to: HFAKGVIGFTEP*NNDHVAPEVFY Trigger: ATAAAACACTTCAGGTGCAACGTGATCATTATTCAAAGGTTCTGTGAAGCCAATTACCCCCTTTGCAAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449601.5

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