Pregenerated sensors for LINC02577 (Homo sapiens)
Ensembl gene IDs: ENSG00000228742Ensembl transcript IDs: ENST00000470135.5, ENST00000490162.3, ENST00000602761.2, ENST00000636036.1, ENST00000650196.1, ENST00000655590.1, ENST00000658697.1, ENST00000659396.1, ENST00000659665.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGGCTGGACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTTaGTGGAGTTGGTACCATGTAGGGGGCTGCCCCAGGCTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGWTVLEVGSLRSRC*WSWYHVGGCPRLLS Trigger: GGACAGCAGCCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTCCAGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602761.2 |
||
| CDS TCA 90 bp | TGGATCTCCTCCCGGACTGAGGGTGAGGACAGGGGGCTGGTCTTCTaGAGGAGTCCCCTGTCTTGGGTTTCAGCACCAAATGTTACATGC | + |
|
Preference number: 5 (lower is better) Translates to: WISSRTEGEDRGLVF*RSPLSWVSAPNVTC Trigger: GCATGTAACATTTGGTGCTGAAACCCAAGACAGGGGACTCCTTCAGAAGACCAGCCCCCTGTCCTCACCCTCAGTCCGGGAGGAGATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000490162.3 ENST00000636036.1 |
||
| CDS TCA 90 bp | GACTGTGATACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTTaGTGGAGTTGGTACCATGTAGGGGGCTGCCCCAGGCTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DCDTVLEVGSLRSRC*WSWYHVGGCPRLLS Trigger: GGACAGCAGCCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTATCACAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000470135.5 ENST00000659396.1 |
||
| CDS CCA 90 bp | GTGGTTATCTCTTACAGGCAGGGATGGGGGACACAAGGTGCAGGGTaGGGAGATCATGAGACTCATTGTCCAGGGGAGGAATGTCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVISYRQGWGTQGAG*GDHETHCPGEECHK Trigger: CTTGTGACATTCCTCCCCTGGACAATGAGTCTCATGATCTCCCCACCCTGCACCTTGTGTCCCCCATCCCTGCCTGTAAGAGATAACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000490162.3 ENST00000636036.1 |
||
| CDS TCA 90 bp | TTCCTTTGCCTTTTGTTCTCTTCAGGCCCTCAGGAGAGTAGATGGTaGCCACCCACACTGGGGCAGACACCAACTTTGCCAATCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLCLLFSSGPQESRW*PPTLGQTPTLPIHG Trigger: TCCGTGGATTGGCAAAGTTGGTGTCTGCCCCAGTGTGGGTGGTCACCATCTACTCTCCTGAGGGCCTGAAGAGAACAAAAGGCAAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS GCA 90 bp | TCTAGCATAGAGAAGAGAGAACTGCCCCAAAGTCTCTCACAGACGTaGACTCCAGGCCAACCAGATGATGTCTCTTGCCTTCTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSIEKRELPQSLSQT*TPGQPDDVSCLLQG Trigger: GCCCTGGAGAAGGCAAGAGACATCATCTGGTTGGCCTGGAGTGCACGTCTGTGAGAGACTTTGGGGCAGTTCTCTCTTCTCTATGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658697.1 |
||
| CDS TCA 90 bp | AATCCTTGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTTaGCATGGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NPWLVDSSLQLLPSC*HGVLPVCLSAPKFP Trigger: GGGAAATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470135.5 |
||
| CDS TCA 90 bp | ATGAGGAGTCTGGGGGCTCTAGGGGATATGCCAACCTTGAGACTGTaGGCAGACTTCCAGACTGTGATCCAGAAATCAGGTTTAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: MRSLGALGDMPTLRL*ADFQTVIQKSGLIR Trigger: TCGGATTAAACCTGATTTCTGGATCACAGTCTGGAAGTCTGCTCACAGTCTCAAGGTTGGCATATCCCCTAGAGCCCCCAGACTCCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659665.1 |
||
| CDS GCA 90 bp | TTAAGGCAGGAACTGGCTGTTTCACTTCTTTTGTGGTTCTTCAGTTaGTCCAGGCCATCCTCCACTGTAGGAGTTATCCGAAGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRQELAVSLLLWFFS*SRPSSTVGVIRSSA Trigger: TGCCGAGCTTCGGATAACTCCTACAGTGGAGGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCCTGCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490162.3 |
||
| CDS CCA 90 bp | TTGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTTGACATaGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LACRLITPTSAFVLT*CSPCVPVCTQISEL Trigger: CAGCTCAGAAATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000659396.1 |
||
| CDS CCA 90 bp | TGTTCTCTTCAGGCCCTCAGGAGAGTAGATGGTGACCACCCACACTaGGGCAGACACCAACTTTGCCAATCCACGGATTCAAATTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: CSLQALRRVDGDHPH*GRHQLCQSTDSNSN Trigger: ATTAGAATTTGAATCCGTGGATTGGCAAAGTTGGTGTCTGCCCCAGTGTGGGTGGTCACCATCTACTCTCCTGAGGGCCTGAAGAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS TCA 90 bp | AATCCTTGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTTaGCATGGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPWLVDSSLQLLPSC*HGVLPVCLSAPKFL Trigger: CAGAAATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000659396.1 |
||
| CDS TCA 90 bp | AGAGGAGGTGGCATTCCAGGAGCAAGGAATGATGGTCAAAGGCAATaGAGTGCACAGGGCATCAATGGCTCTAGCATAGAGAAGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGGGIPGARNDGQRQ*SAQGINGSSIEKRE Trigger: TTCTCTCTTCTCTATGCTAGAGCCATTGATGCCCTGTGCACTTCATTGCCTTTGACCATCATTCCTTGCTCCTGGAATGCCACCTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658697.1 |
||
| CDS GCA 90 bp | AGGAGAGTAGATGGTGACCACCCACACTGGGGCAGACACCAACTTTaGCAATCCACGGATTCAAATTCTAATCTCCTCTGGAAATACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRVDGDHPHWGRHQL*QSTDSNSNLLWKYP Trigger: AGGGTATTTCCAGAGGAGATTAGAATTTGAATCCGTGGATTGGCAAAGTTGGTGTCTGCCCCAGTGTGGGTGGTCACCATCTACTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS GCA 90 bp | ATACCCTCACAGACATACCCAGAAATCAGGTTTAATCCGAGCACCTaGGTCCAGTCAAGTTGCCACATAGAATTCAGCATCACAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPSQTYPEIRFNPST*VQSSCHIEFSITGA Trigger: AGCACCTGTGATGCTGAATTCTATGTGGCAACTTGACTGGACGCAGGTGCTCGGATTAAACCTGATTTCTGGGTATGTCTGTGAGGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS GCA 90 bp | AGACTTCCAGACTGTGATCCAGAAATCAGGTTTAATCCGAGCACCTaGGTCCAGTCAAGTTGCCACATAGAATTCAGCATCACAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLPDCDPEIRFNPST*VQSSCHIEFSITGA Trigger: AGCACCTGTGATGCTGAATTCTATGTGGCAACTTGACTGGACGCAGGTGCTCGGATTAAACCTGATTTCTGGATCACAGTCTGGAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659665.1 |
||
| CDS CCA 90 bp | TTGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTTGACATaGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LACRLITPTSAFVLT*CSPCVPVCTQISLF Trigger: AAAAAGGGAAATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470135.5 |
||
| CDS CCA 90 bp | GAATGTCATCAGTTAAGGCAGGAACTGGCTGTTTCACTTCTTTTGTaGTTCTTCAGTTGCTCCAGGCCATCCTCCACTGTAGGAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: ECHQLRQELAVSLLL*FFSCSRPSSTVGVI Trigger: GATAACTCCTACAGTGGAGGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCCTGCCTTAACTGATGACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490162.3 |
||
| CDS CCA 90 bp | TGTAGTTCAGTCCAAGTCAAAATGCCTGAGAACCAGGGAAGCCAATaGTGTGAATCTCAGTCGAGGGCCAGAGAAGATGTGATGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: CSSVQVKMPENQGSQ*CESQSRAREDVMKC Trigger: ACATTTCATCACATCTTCTCTGGCCCTCGACTGAGATTCACACCATTGGCTTCCCTGGTTCTCAGGCATTTTGACTTGGACTGAACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CCA 90 bp | TTCTGGTGTCCATTTACCAAACTCTCCTCTGTAGTTCATGATCAATaGCTTTTGTTCTGCCTGGATGGTCCTACCCTGTTGTACCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FWCPFTKLSSVVHDQ*LLFCLDGPTLLYPE Trigger: TTCTGGGTACAACAGGGTAGGACCATCCAGGCAGAACAAAAGCCATTGATCATGAACTACAGAGGAGAGTTTGGTAAATGGACACCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CCA 90 bp | AGACACCAACTTTGCCAATCCACGGATTCAAATTCTAATCTCCTCTaGAAATACCCTCACAGACATACCCAGAAATCAGGTTTAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RHQLCQSTDSNSNLL*KYPHRHTQKSGLIR Trigger: TCGGATTAAACCTGATTTCTGGGTATGTCTGTGAGGGTATTTCCAGAGGAGATTAGAATTTGAATCCGTGGATTGGCAAAGTTGGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS TCA 90 bp | AGACATAGCATATCCATTGTTTATGAACTTTGCAAAGCAGATTTATaGGGTTGGTTTTTCTTTTGGATGGGCTTAATTATGTTGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RHSISIVYELCKADL*GWFFFWMGLIMLET Trigger: GGTCTCCAACATAATTAAGCCCATCCAAAAGAAAAACCAACCTCATAAATCTGCTTTGCAAAGTTCATAAACAATGGATATGCTATGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CAA 90 bp | GGAGGGCTGGACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTaGATGGAGTTGGTACCATGTAGGGGGCTGCCCCAGGCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGLDSSGGWKSEIKV*MELVPCRGLPQAAV Trigger: GACAGCAGCCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTCCAGCCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602761.2 |
||
| CDS TCA 72 bp | TCCCGGACTGAGGGTGAGGACAGGGGGCTGGTCTTCTaGAGGAGTCCCCTGTCTTGGGTTTCAGCACCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRTEGEDRGLVF*RSPLSWVSAPN Trigger: ATTTGGTGCTGAAACCCAAGACAGGGGACTCCTTCAGAAGACCAGCCCCCTGTCCTCACCCTCAGTCCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000490162.3 ENST00000636036.1 |
||
| CDS CAA 90 bp | GACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTTGATGGAGTaGGTACCATGTAGGGGGCTGCCCCAGGCTGCTGTCCTGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSSGGWKSEIKVLME*VPCRGLPQAAVLAS Trigger: AGAGGCCAGGACAGCAGCCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602761.2 |
||
| CDS TCA 72 bp | CAGCCTCTCAGGCCTCCCTTCCATGTGCAAGCAGGGTaGCATGAGCTGCATTCCAGGAGGTTAAGGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: QPLRPPFHVQAG*HELHSRRLRHS Trigger: GGAATGCCTTAACCTCCTGGAATGCAGCTCATGTCACCCTGCTTGCACATGGAAGGGAGGCCTGAGAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658697.1 |
||
| CDS CCA 72 bp | CAGGCCCTCAGGAGAGTAGATGGTGACCACCCACACTaGGGCAGACACCAACTTTGCCAATCCACGGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: QALRRVDGDHPH*GRHQLCQSTDS Trigger: TGAATCCGTGGATTGGCAAAGTTGGTGTCTGCCCCAGTGTGGGTGGTCACCATCTACTCTCCTGAGGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CAA 72 bp | GGAGGTTGGAAGTCTGAGATCAAGGTGTTGATGGAGTaGGTACCATGTAGGGGGCTGCCCCAGGCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGWKSEIKVLME*VPCRGLPQAAV Trigger: GACAGCAGCCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS CAA 90 bp | TACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTTGATGGAGTaGGTACCATGTAGGGGGCTGCCCCAGGCTGCTGTCCTGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YSSGGWKSEIKVLME*VPCRGLPQAAVLAS Trigger: AGAGGCCAGGACAGCAGCCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000470135.5 ENST00000659396.1 |
||
| CDS GCA 72 bp | CAGTCGAGGGCCAGAGAAGATGTGATGAAATGTCTCTaGTCAAGCAGGCAGGCGGCAAGCAAGTTAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QSRAREDVMKCL*SSRQAASKLRA Trigger: CGCCCTTAACTTGCTTGCCGCCTGCCTGCTTGAGCAGAGACATTTCATCACATCTTCTCTGGCCCTCGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CAA 72 bp | GGACAGGGGGCTGGTCTTCTGAAGGAGTCCCCTGTCTaGGGTTTCAGCACCAAATGTTACATGCGTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQGAGLLKESPV*GFSTKCYMRLV Trigger: CACCAGACGCATGTAACATTTGGTGCTGAAACCCAAGACAGGGGACTCCTTCAGAAGACCAGCCCCCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS TCA 72 bp | ACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTTaGTGGAGTTGGTACCATGTAGGGGGCTGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVLEVGSLRSRC*WSWYHVGGCPR Trigger: CCTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS TCA 72 bp | CTGGGGGCTCTAGGGGATATGCCAACCTTGAGACTGTaGGCAGACTTCCAGACTGTGATACAGTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGALGDMPTLRL*ADFQTVIQFWR Trigger: CCTCCAGAACTGTATCACAGTCTGGAAGTCTGCTCACAGTCTCAAGGTTGGCATATCCCCTAGAGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000470135.5 ENST00000659396.1 |
||
| CDS TCA 72 bp | CTTTTGTTCTCTTCAGGCCCTCAGGAGAGTAGATGGTaGCCACCCACACTGGGGCAGACACCAACTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLFSSGPQESRW*PPTLGQTPTLP Trigger: TGGCAAAGTTGGTGTCTGCCCCAGTGTGGGTGGTCACCATCTACTCTCCTGAGGGCCTGAAGAGAACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS TCA 72 bp | TCTCAGGCCTCCCTTCCATGTGCAAGCAGGGTGACATaGGCTGCATTCCAGGAGGTTAAGGCATTCCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQASLPCASRVT*AAFQEVKAFLV Trigger: GACTAGGAATGCCTTAACCTCCTGGAATGCAGCTCATGTCACCCTGCTTGCACATGGAAGGGAGGCCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658697.1 |
||
| CDS CCA 72 bp | TGCCCCAGGCTGCTGTCCTGGCCTCTGATGAATTGCTaGCAATCCTTGGCTTGTAGACTCATCACTCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: CPRLLSWPLMNC*QSLACRLITPT Trigger: AGTTGGAGTGATGAGTCTACAAGCCAAGGATTGCCAGCAATTCATCAGAGGCCAGGACAGCAGCCTGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS CCA 72 bp | CTAGTGGCCCCAGGAAGTTCCTCATTCATGGAGGGCTaGACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVAPGSSSFMEG*TVLEVGSLRSR Trigger: CCTTGATCTCAGACTTCCAACCTCCAGAACTGTCCAGCCCTCCATGAATGAGGAACTTCCTGGGGCCACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602761.2 |
||
| CDS CAA 72 bp | GACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTaGATGGAGTTGGTACCATGTAGGGGGCTGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DSSGGWKSEIKV*MELVPCRGLPQ Trigger: CTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602761.2 |
||
| CDS CAA 90 bp | TGCCCCAGGCTGCTGTCCTGGCCTCTGATGAATTGCTGGCAATCCTaGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: CPRLLSWPLMNCWQS*ACRLITPTSAFVLT Trigger: TGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAAGGATTGCCAGCAATTCATCAGAGGCCAGGACAGCAGCCTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS TCA 72 bp | CTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTTaGCATGGTGTTCTCCCTGTGTGCCTGTCTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LVDSSLQLLPSC*HGVLPVCLSAP Trigger: GGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS TCA 72 bp | CTGGGGGCTCTAGGGGATATGCCAACCTTGAGACTGTaGGCAGACTTCCAGACTGTGATCCAGAAATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGALGDMPTLRL*ADFQTVIQKSG Trigger: ACCTGATTTCTGGATCACAGTCTGGAAGTCTGCTCACAGTCTCAAGGTTGGCATATCCCCTAGAGCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659665.1 |
||
| CDS CAA 72 bp | TACAGTTCTGGAGGTTGGAAGTCTGAGATCAAGGTGTaGATGGAGTTGGTACCATGTAGGGGGCTGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YSSGGWKSEIKV*MELVPCRGLPQ Trigger: CTGGGGCAGCCCCCTACATGGTACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000470135.5 ENST00000659396.1 |
||
| CDS TCA 72 bp | GTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCTaGGCTGCATTCCAGGAGGTTAAGGCATTCCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFSLCACLHPNF*AAFQEVKAFLV Trigger: GACTAGGAATGCCTTAACCTCCTGGAATGCAGCTCAGAAATTTGGGTGCAGACAGGCACACAGGGAGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000659396.1 |
||
| CDS TCA 72 bp | GCCATACCCCCAACCCTAAATGTGCCCAATTTCATCTaGTCTAGGAAGCTAAGCCCAACTAGCGTTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AIPPTLNVPNFI*SRKLSPTSVGP Trigger: AGGCCCAACGCTAGTTGGGCTTAGCTTCCTAGATCAGATGAAATTGGGCACATTTAGGGTTGGGGGTATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS TCA 72 bp | GTGGCAAAGAGGAGGTGGCATTCCAGGAGCAAGGAATaGTGGTCAAAGGCAATGAAGTGCACAGGGCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: VAKRRWHSRSKE*WSKAMKCTGHQ Trigger: TTGATGCCCTGTGCACTTCATTGCCTTTGACCATCATTCCTTGCTCCTGGAATGCCACCTCCTCTTTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658697.1 |
||
| CDS GCA 72 bp | AGTCCCCTGTCTTGGGTTTCAGCACCAAATGTTACATaGGTCTGGTGGGGTGAACCTTCATTCCTGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPLSWVSAPNVT*VWWGEPSFLKG Trigger: ACCCTTCAGGAATGAAGGTTCACCCCACCAGACGCATGTAACATTTGGTGCTGAAACCCAAGACAGGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CCA 72 bp | GTCCAAGTCAAAATGCCTGAGAACCAGGGAAGCCAATaGTGTGAATCTCAGTCGAGGGCCAGAGAAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VQVKMPENQGSQ*CESQSRAREDV Trigger: CACATCTTCTCTGGCCCTCGACTGAGATTCACACCATTGGCTTCCCTGGTTCTCAGGCATTTTGACTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CCA 72 bp | CTGTCTTGGGTTTCAGCACCAAATGTTACATGCGTCTaGTGGGGTGAACCTTCATTCCTGAAGGGTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSWVSAPNVTCV*WGEPSFLKGLG Trigger: ACCCAGACCCTTCAGGAATGAAGGTTCACCCCACCAGACGCATGTAACATTTGGTGCTGAAACCCAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CCA 72 bp | ATACATGCAGGTCACAGGGGTTATGATGGCTTACTTTaGGCTCACAGGCCTGACATTCCTGTCCTCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: IHAGHRGYDGLL*AHRPDIPVLHC Trigger: ACAGTGGAGGACAGGAATGTCAGGCCTGTGAGCCCAAAGTAAGCCATCATAACCCCTGTGACCTGCATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CAA 72 bp | CTGCTGTCCTGGCCTCTGATGAATTGCTGGCAATCCTaGGCTTGTAGACTCATCACTCCAACTTCTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSWPLMNCWQS*ACRLITPTSAF Trigger: GAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAAGGATTGCCAGCAATTCATCAGAGGCCAGGACAGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS CAA 90 bp | CAATCCTTGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTaGACATGGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSLACRLITPTSAFV*TWCSPCVPVCTQIS Trigger: GGAAATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAAGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470135.5 |
||
| CDS GCA 72 bp | GATCTGGGAAGGAATCAGCCAGGAGCCTTAGCTTTTTaGTCCAGTAGGTCTAGGAGCAGCTGTAATCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLGRNQPGALAF*SSRSRSSCNPS Trigger: ACTTGGATTACAGCTGCTCCTAGACCTACTGGAGCAAAAAGCTAAGGCTCCTGGCTGATTCCTTCCCAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000490162.3 ENST00000636036.1 |
||
| CDS CCA 72 bp | AGACTCATCACTCCAACTTCTGCCTTCGTGTTGACATaGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: RLITPTSAFVLT*CSPCVPVCTQI Trigger: AATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000659396.1 |
||
| CDS CCA 72 bp | GTGAGCAATGAGGCTGTTTATTCACTTGGGTGCAGGTaGGCTGAGTCCGAAAAAGGAGTCAGCAAAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VSNEAVYSLGCR*AESEKGVSKGK Trigger: TTTCCCTTTGCTGACTCCTTTTTCGGACTCAGCCCACCTGCACCCAAGTGAATAAACAGCCTCATTGCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490162.3 |
||
| CDS CCA 72 bp | TCTTGGGTTTCAGCACCAAATGTTACATGCGTCTGGTaGGGTGAACCTTCATTCCTGAAGGGTCTGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SWVSAPNVTCVW*GEPSFLKGLGQ Trigger: TTGACCCAGACCCTTCAGGAATGAAGGTTCACCCCACCAGACGCATGTAACATTTGGTGCTGAAACCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CAA 90 bp | CAATCCTTGGCTTGTAGACTCATCACTCCAACTTCTGCCTTCGTGTaGACATGGTGTTCTCCCTGTGTGCCTGTCTGCACCCAAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSLACRLITPTSAFV*TWCSPCVPVCTQIS Trigger: AGAAATTTGGGTGCAGACAGGCACACAGGGAGAACACCATGTCAACACGAAGGCAGAAGTTGGAGTGATGAGTCTACAAGCCAAGGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000659396.1 |
||
| CDS CAA 90 bp | ATGGAGAGCAGCTCATCCAAGAGCCCAGCTTTTGAGGGCATAGAGTaGATGAATTTCATGGGAAAGGCAGGACCCTTCACTCCAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MESSSSKSPAFEGIE*MNFMGKAGPFTPTS Trigger: AGAAGTTGGAGTGAAGGGTCCTGCCTTTCCCATGAAATTCATCAACTCTATGCCCTCAAAAGCTGGGCTCTTGGATGAGCTGCTCTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 ENST00000659665.1 |
||
| CDS GCA 72 bp | GAACTGGCTGTTTCACTTCTTTTGTGGTTCTTCAGTTaGTCCAGGCCATCCTCCACTGTAGGAGTTATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ELAVSLLLWFFS*SRPSSTVGVIR Trigger: TCGGATAACTCCTACAGTGGAGGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490162.3 |
||
| CDS GCA 72 bp | GAACTGGCTGTTTCACTTCTTTTGTGGTTCTTCAGTTaGTCCAGGCCATCTGGACGTATACATGCAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ELAVSLLLWFFS*SRPSGRIHAGH Trigger: GTGACCTGCATGTATACGTCCAGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CCA 72 bp | TTCCTCATTCATGGAGGGCTGGACAGTTCTGGAGGTTaGAAGTCTGAGATCAAGGTGTTGATGGAGTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLIHGGLDSSGG*KSEIKVLMELV Trigger: TACCAACTCCATCAACACCTTGATCTCAGACTTCCAACCTCCAGAACTGTCCAGCCCTCCATGAATGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602761.2 |
||
| CDS CCA 72 bp | ATCTGCTATGTGCAAGCTGGAGCCCAGGAAAGCCAATaGTGTAGTTCAGTCCAAGTCAAAATGCCTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ICYVQAGAQESQ*CSSVQVKMPEN Trigger: GTTCTCAGGCATTTTGACTTGGACTGAACTACACCATTGGCTTTCCTGGGCTCCAGCTTGCACATAGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CCA 72 bp | ATGGGAGAAAACCAGGCCCCTGTAGGCCATGGTTTCTaGTGTCCATTTACCAAACTCTCCTCTGTAGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: MGENQAPVGHGF*CPFTKLSSVVH Trigger: ATGAACTACAGAGGAGAGTTTGGTAAATGGACACCAGAAACCATGGCCTACAGGGGCCTGGTTTTCTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CAA 72 bp | CATCAGTTAAGGCAGGAACTGGCTGTTTCACTTCTTTaGTGGTTCTTCAGTTGCTCCAGGCCATCTGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: HQLRQELAVSLL*WFFSCSRPSGR Trigger: ACGTCCAGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCCTGCCTTAACTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CAA 90 bp | GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTGTTTCACTTCTTTaGTGGTTCTTCAGTTGCTCCAGGCCATCTGGACGTATACATGCA | + |
|
Preference number: 6 (lower is better) Translates to: VECHQLRQELAVSLL*WFFSCSRPSGRIHA Trigger: TGCATGTATACGTCCAGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCCTGCCTTAACTGATGACATTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS GCA 72 bp | CAGACATACCCAGAAATCAGGTTTAATCCGAGCACCTaGGTCCAGTCAAGTTGCCACATAGAATTCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: QTYPEIRFNPST*VQSSCHIEFSI Trigger: GATGCTGAATTCTATGTGGCAACTTGACTGGACGCAGGTGCTCGGATTAAACCTGATTTCTGGGTATGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS GCA 72 bp | AGGAAAGCCAATGGTGTAGTTCAGTCCAAGTCAAAATaGCTGAGAACCAGGGAAGCCAATGGTGTGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: RKANGVVQSKSK*LRTREANGVNL Trigger: GAGATTCACACCATTGGCTTCCCTGGTTCTCAGGCATTTTGACTTGGACTGAACTACACCATTGGCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS GCA 72 bp | CTCTCCTCTGTAGTTCATGATCAATGGCTTTTGTTCTaGCTGGATGGTCCTACCCTGTTGTACCCAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSVVHDQWLLF*LDGPTLLYPES Trigger: ACTTTCTGGGTACAACAGGGTAGGACCATCCAGGCAGAACAAAAGCCATTGATCATGAACTACAGAGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CCA 72 bp | TATTTAGATGGGAGAAAACCAGGCCCCTGTAGGCCATaGTTTCTGGTGTCCATTTACCAAACTCTCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YLDGRKPGPCRP*FLVSIYQTLLC Trigger: ACAGAGGAGAGTTTGGTAAATGGACACCAGAAACCATGGCCTACAGGGGCCTGGTTTTCTCCCATCTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CCA 72 bp | CAGTTAAGGCAGGAACTGGCTGTTTCACTTCTTTTGTaGTTCTTCAGTTGCTCCAGGCCATCTGGACGTATA | + |
|
Preference number: 6 (lower is better) Translates to: QLRQELAVSLLL*FFSCSRPSGRI Trigger: TATACGTCCAGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCCTGCCTTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636036.1 |
||
| CDS CAA 72 bp | ACCAAACTCTCCTCTGTAGTTCATGATCAATGGCTTTaGTTCTGCCTGGATGGTCCTACCCTGTTGTACCCA | + |
|
Preference number: 6 (lower is better) Translates to: TKLSSVVHDQWL*FCLDGPTLLYP Trigger: TGGGTACAACAGGGTAGGACCATCCAGGCAGAACAAAAGCCATTGATCATGAACTACAGAGGAGAGTTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CAA 90 bp | TGTCCATTTACCAAACTCTCCTCTGTAGTTCATGATCAATGGCTTTaGTTCTGCCTGGATGGTCCTACCCTGTTGTACCCAGAAAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPFTKLSSVVHDQWL*FCLDGPTLLYPESV Trigger: GACACTTTCTGGGTACAACAGGGTAGGACCATCCAGGCAGAACAAAAGCCATTGATCATGAACTACAGAGGAGAGTTTGGTAAATGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CCA 72 bp | CCATTTACCAAACTCTCCTCTGTAGTTCATGATCAATaGCTTTTGTTCTGCCTGGATGGTCCTACCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PFTKLSSVVHDQ*LLFCLDGPTLL Trigger: CAACAGGGTAGGACCATCCAGGCAGAACAAAAGCCATTGATCATGAACTACAGAGGAGAGTTTGGTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS TCA 72 bp | GAGATGGATAAAGATCTCCCTCATCATCCAACCTGTTaGGGAATGGAACAGGACGGAATAAAATGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EMDKDLPHHPTC*GMEQDGIKWWK Trigger: CTTCCACCATTTTATTCCGTCCTGTTCCATTCCTCAACAGGTTGGATGATGAGGGAGATCTTTATCCATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 |
||
| CDS CCA 72 bp | CTTTGCCAATCCACGGATTCAAATTCTAATCTCCTCTaGAAATACCCTCACAGACATACCCAGAAATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LCQSTDSNSNLL*KYPHRHTQKSG Trigger: ACCTGATTTCTGGGTATGTCTGTGAGGGTATTTCCAGAGGAGATTAGAATTTGAATCCGTGGATTGGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602761.2 ENST00000650196.1 |
||
| CDS CAA 72 bp | AATTTACATTTTTGCATACTTCTTCTGGACCATGTTTaGAGACCTTTAGACTCCCATTTGGAGAGCCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NLHFCILLLDHV*RPLDSHLESLG Trigger: TCCTAGGCTCTCCAAATGGGAGTCTAAAGGTCTCAAAACATGGTCCAGAAGAAGTATGCAAAAATGTAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000470135.5 ENST00000602761.2 ENST00000650196.1 ENST00000655590.1 ENST00000659396.1 ENST00000659665.1 |
||