Pregenerated sensors for LINC02573 (Homo sapiens)

Ensembl gene IDs: ENSG00000233236

Ensembl transcript IDs: ENST00000436373.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCTGGTTTGATTCACGCACACATTTATTCTTGCATATACCATGTCTaGTCTTGGCACAAGAAACTCTCCATAGTGTGTCCTACATGCAGT	+
Preference number: 5 (lower is better) Translates to: SGLIHAHIYSCIYHV*SWHKKLSIVCPTCS Trigger: ACTGCATGTAGGACACACTATGGAGAGTTTCTTGTGCCAAGATCAGACATGGTATATGCAAGAATAAATGTGTGCGTGAATCAAACCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CAA 90 bp	CTAACTCCACACCAGGCCTCTGCATCTCTCAAGCAGGGTAGGCAATaGCCTTCGTCCCTCTGTGCTGATATCCTGAGCAGGGAGGGCACA	+
Preference number: 6 (lower is better) Translates to: LTPHQASASLKQGRQ*PSSLCADILSREGT Trigger: TGTGCCCTCCCTGCTCAGGATATCAGCACAGAGGGACGAAGGCAATTGCCTACCCTGCTTGAGAGATGCAGAGGCCTGGTGTGGAGTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CAA 72 bp	CACCAGGCCTCTGCATCTCTCAAGCAGGGTAGGCAATaGCCTTCGTCCCTCTGTGCTGATATCCTGAGCAGG	+
Preference number: 6 (lower is better) Translates to: HQASASLKQGRQ*PSSLCADILSR Trigger: CCTGCTCAGGATATCAGCACAGAGGGACGAAGGCAATTGCCTACCCTGCTTGAGAGATGCAGAGGCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CCA 72 bp	GGTAATTCTCCATTCCCAGGTCACAGGAAGCAGGAATaGAGGGTCAGGTGGACAGAGAGAGAATATTTTGGC	+
Preference number: 6 (lower is better) Translates to: GNSPFPGHRKQE*RVRWTEREYFG Trigger: GCCAAAATATTCTCTCTCTGTCCACCTGACCCTCCATTCCTGCTTCCTGTGACCTGGGAATGGAGAATTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CCA 72 bp	AGGATGTGGGGCACTTTAAGTTCACAAACAAGTGCCTaGAGTGTCTGTTTAAAGAAAGGGGAACCAGTCAGC	+
Preference number: 6 (lower is better) Translates to: RMWGTLSSQTSA*SVCLKKGEPVS Trigger: GCTGACTGGTTCCCCTTTCTTTAAACAGACACTCCAGGCACTTGTTTGTGAACTTAAAGTGCCCCACATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CAA 72 bp	AGGAATGGAGGGTCAGGTGGACAGAGAGAGAATATTTaGGCAGTTAGCAGTATGCATAAGGAAATAGGATGT	+
Preference number: 6 (lower is better) Translates to: RNGGSGGQRENI*AVSSMHKEIGC Trigger: ACATCCTATTTCCTTATGCATACTGCTAACTGCCAAAATATTCTCTCTCTGTCCACCTGACCCTCCATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CAA 72 bp	CGCACACATTTATTCTTGCATATACCATGTCTGATCTaGGCACAAGAAACTCTCCATAGTGTGTCCTACATG	+
Preference number: 6 (lower is better) Translates to: RTHLFLHIPCLI*AQETLHSVSYM Trigger: CATGTAGGACACACTATGGAGAGTTTCTTGTGCCAAGATCAGACATGGTATATGCAAGAATAAATGTGTGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS TCA 72 bp	ATTCACGCACACATTTATTCTTGCATATACCATGTCTaGTCTTGGCACAAGAAACTCTCCATAGTGTGTCCT	+
Preference number: 6 (lower is better) Translates to: IHAHIYSCIYHV*SWHKKLSIVCP Trigger: AGGACACACTATGGAGAGTTTCTTGTGCCAAGATCAGACATGGTATATGCAAGAATAAATGTGTGCGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1
CDS CAA 90 bp	AGACAACCTGGGAGGATCTACAGTCAGATAATTAGAATTGTAAGGTaGCTGGCTGGATTAGTCAGGTTAGCAAGAATACAATATAGTAAT	+
Preference number: 6 (lower is better) Translates to: RQPGRIYSQIIRIVR*LAGLVRLARIQYSN Trigger: ATTACTATATTGTATTCTTGCTAACCTGACTAATCCAGCCAGCAACCTTACAATTCTAATTATCTGACTGTAGATCCTCCCAGGTTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436373.1

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