Pregenerated sensors for LINC02558 (Homo sapiens)
Ensembl gene IDs: ENSG00000230866Ensembl transcript IDs: ENST00000416995.2, ENST00000436395.1, ENST00000658411.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCTTTCTGAAAGCTGTCCGTGATGACACCGAGGCCTGGGTGAAGTaGCCGGCGCCTGAACCAAAACCCACGGAGCCTGGCGGCCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: PFLKAVRDDTEAWVK*PAPEPKPTEPGGRG Trigger: GCCGCGGCCGCCAGGCTCCGTGGGTTTTGGTTCAGGCGCCGGTCACTTCACCCAGGCCTCGGTGTCATCACGGACAGCTTTCAGAAAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436395.1 |
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| CDS CCA 90 bp | GAAAGCAACAGAGTCTGTCGGCGGGAGCTCCCCATCCCCACACTGTaGCTAGACAGAGTTCTACAACATCCTTGGGCACACCGGCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ESNRVCRRELPIPTL*LDRVLQHPWAHRRL Trigger: CAGGCGCCGGTGTGCCCAAGGATGTTGTAGAACTCTGTCTAGCCACAGTGTGGGGATGGGGAGCTCCCGCCGACAGACTCTGTTGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416995.2 ENST00000658411.1 |
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| CDS GCA 90 bp | GTGGCTGCCAGCATGCCTTGGCTTGTACCATATCACTCCGATCTTTaGCTCTGTGGGGGCTACATTGGCGCAAGACCAAGGACCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VAASMPWLVPYHSDL*LCGGYIGARPRTLV Trigger: CACCAGGGTCCTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTGGCAGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 90 bp | GAAAGCAACAGAGTCTGTCGGCGGGAGCTCCCCATCCCCACACTGTaGCTAGACAGAGTTCTACAACATCCTTGGGCACACTACGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: ESNRVCRRELPIPTL*LDRVLQHPWAHYVA Trigger: GGCAACGTAGTGTGCCCAAGGATGTTGTAGAACTCTGTCTAGCCACAGTGTGGGGATGGGGAGCTCCCGCCGACAGACTCTGTTGCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436395.1 |
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| CDS CCA 90 bp | ATCTTTGCCTCTGTGGGGGCTACATTGGCGCAAGACCAAGGACCCTaGTGTTCCTCCAGTCATCGGAGCCATATCAGTAGGCACCACCTC | + |
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Preference number: 5 (lower is better) Translates to: IFASVGATLAQDQGP*CSSSHRSHISRHHL Trigger: GAGGTGGTGCCTACTGATATGGCTCCGATGACTGGAGGAACACCAGGGTCCTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 90 bp | CAGCATGCCTTGGCTTGTACCATATCACTCCGATCTTTGCCTCTGTaGGGGCTACATTGGCGCAAGACCAAGGACCCTGGTGTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QHALACTISLRSLPL*GLHWRKTKDPGVPP Trigger: TGGAGGAACACCAGGGTCCTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS GCA 90 bp | ACTGAGGTTCTGGGGGACAATCCTTCCTTGCCAGCTTCTAGTGGCTaGCAGCATGCCTTGGCTTGTACCATATCACTCCGATCTTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: TEVLGDNPSLPASSG*QHALACTISLRSLP Trigger: AGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTGGCAGCCACTAGAAGCTGGCAAGGAAGGATTGTCCCCCAGAACCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 90 bp | AATTGCTCTGGCCAGGACTTCCATAGGACTTCCAGTATTCTACATTaGCGCAAGACCAAGGACCCTGGTGTTCCTCCAGTCATCGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: NCSGQDFHRTSSILH*RKTKDPGVPPVIGA Trigger: GGCTCCGATGACTGGAGGAACACCAGGGTCCTTGGTCTTGCGCCAATGTAGAATACTGGAAGTCCTATGGAAGTCCTGGCCAGAGCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416995.2 |
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| CDS TCA 90 bp | CTTATAGTTCTGGAAGGCAAAAGTATGAAATCAGTTTCACTGGGCTaGAAGCAAGGTGTTAGCAGAACCACACTACTGAGGTTCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: LIVLEGKSMKSVSLG*KQGVSRTTLLRFWG Trigger: CCCCCAGAACCTCAGTAGTGTGGTTCTGCTAACACCTTGCTTTCAGCCCAGTGAAACTGATTTCATACTTTTGCCTTCCAGAACTATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS GCA 90 bp | TTACACCACCATCATCACTGCAAACATGTGAGAAATGTGTCGTGCTaGCATACTACAACAGCTACAATGTCAGGAATTTTTCAGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LHHHHHCKHVRNVSC*HTTTATMSGIFQLH Trigger: ATGGAGCTGAAAAATTCCTGACATTGTAGCTGTTGTAGTATGGCAGCACGACACATTTCTCACATGTTTGCAGTGATGATGGTGGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS GCA 90 bp | TGTTTACACCACCATCATCACTGCAAACATGTGAGAAATGTGTCGTaGTGCCATACTACAACAGCTACAATGTCAGGAATTTTTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CLHHHHHCKHVRNVS*CHTTTATMSGIFQL Trigger: GAGCTGAAAAATTCCTGACATTGTAGCTGTTGTAGTATGGCAGCACGACACATTTCTCACATGTTTGCAGTGATGATGGTGGTGTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 90 bp | GGGCATTTGGGCTGGTTCCACATTTTTCTAATACTTTTATACGTCTaGCAGTACAATAGGTTTGTTTACACCACCATCATCACTGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: GHLGWFHIFLILLYV*QYNRFVYTTIITAN Trigger: GTTTGCAGTGATGATGGTGGTGTAAACAAACCTATTGTACTGCCAGACGTATAAAAGTATTAGAAAAATGTGGAACCAGCCCAAATGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 90 bp | TTTCTTATGCCTTTGCATTCTCATAGCTTAGCTCCCACTTATGAGTaGGAACATACAATGTTTGGTTTTCCATTCCTGAGTTACTTCACT | + |
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Preference number: 5 (lower is better) Translates to: FLMPLHSHSLAPTYE*EHTMFGFPFLSYFT Trigger: AGTGAAGTAACTCAGGAATGGAAAACCAAACATTGTATGTTCTCACTCATAAGTGGGAGCTAAGCTATGAGAATGCAAAGGCATAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 90 bp | TACCACAATTTCTTTATACACTCGTTGGTTGATGGGCATTTGGGCTaGTTCCACATTTTTCTAATACTTTTATACGTCTGGCAGTACAAT | + |
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Preference number: 5 (lower is better) Translates to: YHNFFIHSLVDGHLG*FHIFLILLYVWQYN Trigger: ATTGTACTGCCAGACGTATAAAAGTATTAGAAAAATGTGGAACCAGCCCAAATGCCCATCAACCAACGAGTGTATAAAGAAATTGTGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 72 bp | GGACAACCAGCGGCCTGTCCCAGCTACTCAGGAGGCTaGCGCGGGGAATTGCTTCCACCCGGGAGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GQPAACPSYSGG*RGELLPPGRQR Trigger: CCTCTGCCTCCCGGGTGGAAGCAATTCCCCGCGTCAGCCTCCTGAGTAGCTGGGACAGGCCGCTGGTTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416995.2 |
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| CDS TCA 72 bp | ACAGAGTTCTACAACATCCTTGGGCACACCGGCGCCTaGACCAAAACCCACGGAGCCTGGCGGCCGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TEFYNILGHTGA*TKTHGAWRPRL Trigger: GAGCCGCGGCCGCCAGGCTCCGTGGGTTTTGGTTCAGGCGCCGGTGTGCCCAAGGATGTTGTAGAACTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416995.2 ENST00000658411.1 |
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| CDS TCA 72 bp | AAAGCTGTCCGTGATGACACCGAGGCCTGGGTGAAGTaGCCGGCGCCTGAACCAAAACCCACGGAGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: KAVRDDTEAWVK*PAPEPKPTEPG Trigger: GCCAGGCTCCGTGGGTTTTGGTTCAGGCGCCGGTCACTTCACCCAGGCCTCGGTGTCATCACGGACAGCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436395.1 |
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| CDS CCA 72 bp | AGAGTCTGTCGGCGGGAGCTCCCCATCCCCACACTGTaGCTAGACAGAGTTCTACAACATCCTTGGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: RVCRRELPIPTL*LDRVLQHPWAH Trigger: GTGTGCCCAAGGATGTTGTAGAACTCTGTCTAGCCACAGTGTGGGGATGGGGAGCTCCCGCCGACAGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416995.2 ENST00000436395.1 ENST00000658411.1 |
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| CDS CAA 90 bp | AGTGGCTGCCAGCATGCCTTGGCTTGTACCATATCACTCCGATCTTaGCCTCTGTGGGGGCTACATTGGCGCAAGACCAAGGACCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SGCQHALACTISLRS*PLWGLHWRKTKDPG Trigger: ACCAGGGTCCTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTGGCAGCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 72 bp | GTAGTCCCAGGGACTTGGGAGGCTGACTTGAGTCCATaGGTTCTGGGCTGTAGTGCACTCTACCAATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: VVPGTWEADLSP*VLGCSALYQLG Trigger: GCCCAATTGGTAGAGTGCACTACAGCCCAGAACTCATGGACTCAAGTCAGCCTCCCAAGTCCCTGGGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416995.2 ENST00000658411.1 |
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| CDS TCA 72 bp | CCACCTTGGCCTCACAAAGTGCTGAGGTTATGGGTGTaGGCCACCATGTCCAGGCTGTCTCCCCTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PPWPHKVLRLWV*ATMSRLSPLSE Trigger: TTCAGAAAGGGGAGACAGCCTGGACATGGTGGCTCACACCCATAACCTCAGCACTTTGTGAGGCCAAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436395.1 |
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| CDS GCA 72 bp | CTGGGGGACAATCCTTCCTTGCCAGCTTCTAGTGGCTaGCAGCATGCCTTGGCTTGTACCATATCACTCCGA | + |
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Preference number: 6 (lower is better) Translates to: LGDNPSLPASSG*QHALACTISLR Trigger: TCGGAGTGATATGGTACAAGCCAAGGCATGCTGGCAGCCACTAGAAGCTGGCAAGGAAGGATTGTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS GCA 72 bp | ACCACACTACTGAGGTTCTGGGGGACAATCCTTCCTTaGCAGCTTCTAGTGGCTGCCAGCATGCCTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TTLLRFWGTILP*QLLVAASMPWL Trigger: AAGCCAAGGCATGCTGGCAGCCACTAGAAGCTGGCAAGGAAGGATTGTCCCCCAGAACCTCAGTAGTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 72 bp | AACCACACTACTGAGGTTCTGGGGGACAATCCTTCCTaGCCAGCTTCTAGTGGCTGCCAGCATGCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: NHTTEVLGDNPS*PASSGCQHALA Trigger: AGCCAAGGCATGCTGGCAGCCACTAGAAGCTGGCAAGGAAGGATTGTCCCCCAGAACCTCAGTAGTGTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS GCA 72 bp | AGCATGCCTTGGCTTGTACCATATCACTCCGATCTTTaGCTCTGTGGGGGCTACATTGGCGCAAGACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SMPWLVPYHSDL*LCGGYIGARPR Trigger: CCTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 72 bp | TTGGCTTGTACCATATCACTCCGATCTTTGCCTCTGTaGGGGCTACATTGGCGCAAGACCAAGGACCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LACTISLRSLPL*GLHWRKTKDPG Trigger: ACCAGGGTCCTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 72 bp | CAGCATGCCTTGGCTTGTACCATATCACTCCGATCTTaGCCTCTGTGGGGGCTACATTGGCGCAAGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: QHALACTISLRS*PLWGLHWRKTK Trigger: CTTGGTCTTGCGCCAATGTAGCCCCCACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 72 bp | CCTTCCTTGCCAGCTTCTAGTGGCTGCCAGCATGCCTaGGCTTGTACCATATCACTCCGATCTTTGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PSLPASSGCQHA*ACTISLRSLPL Trigger: CAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTGGCAGCCACTAGAAGCTGGCAAGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 72 bp | AATTGGGCATCCACACTGAGTTTGGCATCAATATGGTaGCCTTCCAGGAGCAAGGGACAACCAGCGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: NWASTLSLASIW*PSRSKGQPAAC Trigger: ACAGGCCGCTGGTTGTCCCTTGCTCCTGGAAGGTCACCATATTGATGCCAAACTCAGTGTGGATGCCCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416995.2 |
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| CDS TCA 72 bp | AATTGGGCATCCACACTGAGTTTGGCATCAATATGGTaGCCTTCCAGGAGCAAGGGACAACCAGCGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: NWASTLSLASIW*PSRSKGQPAAK Trigger: CTTGGCCGCTGGTTGTCCCTTGCTCCTGGAAGGTCACCATATTGATGCCAAACTCAGTGTGGATGCCCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 72 bp | TGGGCTGAAAGCAAGGTGTTAGCAGAACCACACTACTaGGGTTCTGGGGGACAATCCTTCCTTGCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: WAESKVLAEPHY*GSGGQSFLASF Trigger: GAAGCTGGCAAGGAAGGATTGTCCCCCAGAACCTCAGTAGTGTGGTTCTGCTAACACCTTGCTTTCAGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 72 bp | CTTCCTTGCCAGCTTCTAGTGGCTGCCAGCATGCCTTaGCTTGTACCATATCACTCCGATCTTTGCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LPCQLLVAASMP*LVPYHSDLCLC Trigger: ACAGAGGCAAAGATCGGAGTGATATGGTACAAGCCAAGGCATGCTGGCAGCCACTAGAAGCTGGCAAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 72 bp | AAGCAAGGTGTTAGCAGAACCACACTACTGAGGTTCTaGGGGACAATCCTTCCTTGCCAGCTTCTAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KQGVSRTTLLRF*GTILPCQLLVA Trigger: AGCCACTAGAAGCTGGCAAGGAAGGATTGTCCCCCAGAACCTCAGTAGTGTGGTTCTGCTAACACCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 72 bp | CTGGAAGGCAAAAGTATGAAATCAGTTTCACTGGGCTaGAAGCAAGGTGTTAGCAGAACCACACTACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LEGKSMKSVSLG*KQGVSRTTLLR Trigger: CCTCAGTAGTGTGGTTCTGCTAACACCTTGCTTTCAGCCCAGTGAAACTGATTTCATACTTTTGCCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS GCA 72 bp | CACCATCATCACTGCAAACATGTGAGAAATGTGTCGTaGTGCCATACTACAACAGCTACAATGTCAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: HHHHCKHVRNVS*CHTTTATMSGI Trigger: AATTCCTGACATTGTAGCTGTTGTAGTATGGCAGCACGACACATTTCTCACATGTTTGCAGTGATGATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS TCA 72 bp | CCTTTGCATTCTCATAGCTTAGCTCCCACTTATGAGTaGGAACATACAATGTTTGGTTTTCCATTCCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PLHSHSLAPTYE*EHTMFGFPFLS Trigger: ACTCAGGAATGGAAAACCAAACATTGTATGTTCTCACTCATAAGTGGGAGCTAAGCTATGAGAATGCAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 72 bp | CACTGTTGCATGTATGGTCCATCATTGACAGAAACGTaGTTAGGTAGTACACAGCTATATTTGTTTCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: HCCMYGPSLTET*LGSTQLYLFRV Trigger: CACACGAAACAAATATAGCTGTGTACTACCTAACAACGTTTCTGTCAATGATGGACCATACATGCAACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 72 bp | GGCTGGTTCCACATTTTTCTAATACTTTTATACGTCTaGCAGTACAATAGGTTTGTTTACACCACCATCATC | + |
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Preference number: 6 (lower is better) Translates to: GWFHIFLILLYV*QYNRFVYTTII Trigger: GATGATGGTGGTGTAAACAAACCTATTGTACTGCCAGACGTATAAAAGTATTAGAAAAATGTGGAACCAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CCA 72 bp | TTCTTTATACACTCGTTGGTTGATGGGCATTTGGGCTaGTTCCACATTTTTCTAATACTTTTATACGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FFIHSLVDGHLG*FHIFLILLYVW Trigger: CCAGACGTATAAAAGTATTAGAAAAATGTGGAACCAGCCCAAATGCCCATCAACCAACGAGTGTATAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 90 bp | TATATATACCACAATTTCTTTATACACTCGTTGGTTGATGGGCATTaGGGCTGGTTCCACATTTTTCTAATACTTTTATACGTCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: YIYHNFFIHSLVDGH*GWFHIFLILLYVWQ Trigger: CTGCCAGACGTATAAAAGTATTAGAAAAATGTGGAACCAGCCCAAATGCCCATCAACCAACGAGTGTATAAAGAAATTGTGGTATATATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 72 bp | CACAATTTCTTTATACACTCGTTGGTTGATGGGCATTaGGGCTGGTTCCACATTTTTCTAATACTTTTATAC | + |
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Preference number: 6 (lower is better) Translates to: HNFFIHSLVDGH*GWFHIFLILLY Trigger: GTATAAAAGTATTAGAAAAATGTGGAACCAGCCCAAATGCCCATCAACCAACGAGTGTATAAAGAAATTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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| CDS CAA 72 bp | ATTTTTCAGCTCCATTATAATCTTATGAGATCACTGTaGCATGTATGGTCCATCATTGACAGAAACGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: IFQLHYNLMRSL*HVWSIIDRNVV Trigger: AACAACGTTTCTGTCAATGATGGACCATACATGCAACAGTGATCTCATAAGATTATAATGGAGCTGAAAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658411.1 |
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