Pregenerated sensors for LINC02542 (Homo sapiens)
Ensembl gene IDs: ENSG00000226453, ENSG00000287606Ensembl transcript IDs: ENST00000418567.2, ENST00000656630.1, ENST00000656925.1, ENST00000657600.1, ENST00000657995.1, ENST00000658218.1, ENST00000658550.1, ENST00000660534.1, ENST00000660637.1, ENST00000663543.1, ENST00000664615.1, ENST00000665153.1, ENST00000666226.1, ENST00000666700.1, ENST00000667666.1, ENST00000668266.1, ENST00000668303.1, ENST00000668378.1, ENST00000669534.1, ENST00000670435.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACGTCCATCGGGAGCCATGTCTATCCATCCCCATGGACTTGGGCTaGCTCCTGTGCAATTCACTCCATCTGGCTCAGAGGGTCCTACGT | + |
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Preference number: 5 (lower is better) Translates to: HVHREPCLSIPMDLG*LLCNSLHLAQRVLR Trigger: ACGTAGGACCCTCTGAGCCAGATGGAGTGAATTGCACAGGAGGCAGCCCAAGTCCATGGGGATGGATAGACATGGCTCCCGATGGACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664615.1 ENST00000666226.1 |
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| CDS CCA 90 bp | CAATCCACGTCCATCGGGAGCCATGTCTATCCATCCCCATGGACTTaGGCTGCCTCCTGTGCAATTCACTCCATCTGGCTCAGAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QSTSIGSHVYPSPWT*AASCAIHSIWLRGS Trigger: GGACCCTCTGAGCCAGATGGAGTGAATTGCACAGGAGGCAGCCCAAGTCCATGGGGATGGATAGACATGGCTCCCGATGGACGTGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664615.1 ENST00000666226.1 |
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| CDS CCA 90 bp | TCCCACCAATCCACGTCCATCGGGAGCCATGTCTATCCATCCCCATaGACTTGGGCTGCCTCCTGTGCAATTCACTCCATCTGGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SHQSTSIGSHVYPSP*TWAASCAIHSIWLR Trigger: TCTGAGCCAGATGGAGTGAATTGCACAGGAGGCAGCCCAAGTCCATGGGGATGGATAGACATGGCTCCCGATGGACGTGGATTGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664615.1 ENST00000666226.1 |
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| CDS CCA 90 bp | CCCAGCTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCCTGGCTCAGAGGGTCCTACGTCCACGGAGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: PSCQLSTGRMPFTYS*TGSWLRGSYVHGVS Trigger: CGAGACTCCGTGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CCA 90 bp | GATCAGTTCAGCATGGCTGGGGAGGCCTCAGGAGACTTACAATCATaGCGGAAGCCAAAGGGGAAACAACGCACCTTCTTCACAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: DQFSMAGEASGDLQS*RKPKGKQRTFFTRW Trigger: CCACCTTGTGAAGAAGGTGCGTTGTTTCCCCTTTGGCTTCCGCCATGATTGTAAGTCTCCTGAGGCCTCCCCAGCCATGCTGAACTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS GCA 90 bp | TCCCAATGTCCTACCCAACCATCGCTTTTTCAGGCTGAAGAGTTCTaGCAGGAGGCAAAGGTTGCAGTCAGCCAAGATCCTGCCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: SQCPTQPSLFQAEEF*QEAKVAVSQDPATA Trigger: TGCAGTGGCAGGATCTTGGCTGACTGCAACCTTTGCCTCCTGGCAGAACTCTTCAGCCTGAAAAAGCGATGGTTGGGTAGGACATTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657600.1 ENST00000663543.1 |
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| CDS CCA 90 bp | CTCTCCACTGGAAGGATGCCATTTACTTATTCTTGGACTGGATCCTaGCTCAGAGGGTCCTACGTCCACGGAGTCTCGCTGATTGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LSTGRMPFTYSWTGS*LRGSYVHGVSLIAS Trigger: GCTAGCAATCAGCGAGACTCCGTGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CCA 90 bp | CTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTGGACTaGATCCTGGCTCAGAGGGTCCTACGTCCACGGAGTCTCGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LSALHWKDAIYLFLD*ILAQRVLRPRSLAD Trigger: ATCAGCGAGACTCCGTGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CCA 90 bp | CCCAGCTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCAGTTCAGCATGGCTGGGGAGGCCTCAGGAGACTT | + |
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Preference number: 5 (lower is better) Translates to: PSCQLSTGRMPFTYS*TGSVQHGWGGLRRL Trigger: AAGTCTCCTGAGGCCTCCCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS TCA 90 bp | CATACCCTTATCCCAATGTCCTACCCAACCATCGCTTTTTCAGGCTaGAGAGTTCTGCCAGGAGGCAAAGGTTGCAGTCAGCCAAGATCC | + |
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Preference number: 5 (lower is better) Translates to: HTLIPMSYPTIAFSG*RVLPGGKGCSQPRS Trigger: GGATCTTGGCTGACTGCAACCTTTGCCTCCTGGCAGAACTCTTCAGCCTGAAAAAGCGATGGTTGGGTAGGACATTGGGATAAGGGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657600.1 ENST00000663543.1 |
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| CDS CCA 90 bp | TGGATACAGCCAGCCCAGAATGGACTTGTCCTTGAGCTCCACAACTaGAATCCCAGAATAAGGGAGGCAGTTGATGCAGGTCAGACTCAT | + |
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Preference number: 5 (lower is better) Translates to: WIQPAQNGLVLELHN*NPRIREAVDAGQTH Trigger: ATGAGTCTGACCTGCATCAACTGCCTCCCTTATTCTGGGATTCCAGTTGTGGAGCTCAAGGACAAGTCCATTCTGGGCTGGCTGTATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CCA 90 bp | GGTGACAGCTGTTGGAAAGAGCCTGGCTTCCAGTGGGGATATAGTTaGACTAAAGAAGTTGGATACAGCCAGCCCAGAATGGACTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GDSCWKEPGFQWGYS*TKEVGYSQPRMDLS Trigger: GGACAAGTCCATTCTGGGCTGGCTGTATCCAACTTCTTTAGTCCAACTATATCCCCACTGGAAGCCAGGCTCTTTCCAACAGCTGTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CCA 90 bp | GAAAGAGGCATGGGTGACAGCTGTTGGAAAGAGCCTGGCTTCCAGTaGGGATATAGTTGGACTAAAGAAGTTGGATACAGCCAGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ERGMGDSCWKEPGFQ*GYSWTKEVGYSQPR Trigger: TCTGGGCTGGCTGTATCCAACTTCTTTAGTCCAACTATATCCCCACTGGAAGCCAGGCTCTTTCCAACAGCTGTCACCCATGCCTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS GCA 90 bp | CCTGTGGCTTCATTCCTAAAGTTCAGCACAGTGCTCCTCCATCAGTaGAGCTTGGTTGATGTACCAACCAGGATCCTGGCAAGAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: PVASFLKFSTVLLHQ*SLVDVPTRILARNR Trigger: TCTGTTTCTTGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAACTTTAGGAATGAAGCCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CCA 90 bp | TGGAAGGATGCCATTTACTTATTCTTGGACTGGATCAGTTCAGCATaGCTGGGGAGGCCTCAGGAGACTTACAATCATGGCGGAAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: WKDAIYLFLDWISSA*LGRPQETYNHGGSQ Trigger: TTGGCTTCCGCCATGATTGTAAGTCTCCTGAGGCCTCCCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS CCA 90 bp | CCCAGCTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCCTGGAAAATCGGGTCACTCCTACCCGAATACTGT | + |
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Preference number: 5 (lower is better) Translates to: PSCQLSTGRMPFTYS*TGSWKIGSLLPEYC Trigger: ACAGTATTCGGGTAGGAGTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS TCA 90 bp | ATTCCTAAAGTTCAGCACAGTGCTCCTCCATCAGTGCAGCTTGGTTaGTGTACCAACCAGGATCCTGGCAAGAAACAGATGGCACACTCA | + |
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Preference number: 5 (lower is better) Translates to: IPKVQHSAPPSVQLG*CTNQDPGKKQMAHS Trigger: TGAGTGTGCCATCTGTTTCTTGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAACTTTAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS GCA 90 bp | CTGGATCTTGTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCAGTTCAGCATGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LDLVSIPAVSSPLEG*HLLILGLDQFSMAG Trigger: CCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAACAAGATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS GCA 90 bp | CTGGATCTTGTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCAGCCTGTCTTCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: LDLVSIPAVSSPLEG*HLLILGLDQPVFPP Trigger: TGGTGGGAAGACAGGCTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAACAAGATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664615.1 ENST00000666226.1 |
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| CDS GCA 90 bp | CTGGATCTTGTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCCTGGAAAATCGGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LDLVSIPAVSSPLEG*HLLILGLDPGKSGH Trigger: GTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAACAAGATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS CCA 90 bp | CTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTGGACTaGATCCTGGAAAATCGGGTCACTCCTACCCGAATACTGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSALHWKDAIYLFLD*ILENRVTPTRILCF Trigger: AAAGCACAGTATTCGGGTAGGAGTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS TCA 90 bp | GAGGTATATCCAATCCTGATTAACAGGGCTGTGGATAAAATGGTCTaGGATAAAGGCAAAGTGTTCGATGAGCTCTTCCTGAGATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EVYPILINRAVDKMV*DKGKVFDELFLRFL Trigger: CAGGAATCTCAGGAAGAGCTCATCGAACACTTTGCCTTTATCTCAGACCATTTTATCCACAGCCCTGTTAATCAGGATTGGATATACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 90 bp | TCTTTCCCTCCGTTTAAGACTCCCTCATGGAGGTATATCCAATCCTaGTTAACAGGGCTGTGGATAAAATGGTCTGAGATAAAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SFPPFKTPSWRYIQS*LTGLWIKWSEIKAK Trigger: CTTTGCCTTTATCTCAGACCATTTTATCCACAGCCCTGTTAATCAGGATTGGATATACCTCCATGAGGGAGTCTTAAACGGAGGGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS GCA 90 bp | CTGGATCTTGTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCCATATTATCTTGCAATA | + |
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Preference number: 5 (lower is better) Translates to: LDLVSIPAVSSPLEG*HLLILGLDPYYLAI Trigger: TATTGCAAGATAATATGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAACAAGATCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658550.1 ENST00000667666.1 |
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| CDS CCA 90 bp | AGTCAAGGCCCTGGAAAGTCTGAACCATTGCTTATCTTTAATTTATaGTTCTCTGCTAAGGGCAGCACAGAACTGATTGTTCATAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: SQGPGKSEPLLIFNL*FSAKGSTELIVHKV Trigger: AACCTTATGAACAATCAGTTCTGTGCTGCCCTTAGCAGAGAACCATAAATTAAAGATAAGCAATGGTTCAGACTTTCCAGGGCCTTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 90 bp | TTGCTTAACCAAATACATATTTGGTTGGGATTTCAGAGTTACTCCTaGGTCAAGGCCCTGGAAAGTCTGAACCATTGCTTATCTTTAATT | + |
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Preference number: 5 (lower is better) Translates to: LLNQIHIWLGFQSYS*VKALESLNHCLSLI Trigger: AATTAAAGATAAGCAATGGTTCAGACTTTCCAGGGCCTTGACTCAGGAGTAACTCTGAAATCCCAACCAAATATGTATTTGGTTAAGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS GCA 72 bp | CGGGAGCCATGTCTATCCATCCCCATGGACTTGGGCTaGCTCCTGTGCAATTCACTCCATCTGGCTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: REPCLSIPMDLG*LLCNSLHLAQR Trigger: CCTCTGAGCCAGATGGAGTGAATTGCACAGGAGGCAGCCCAAGTCCATGGGGATGGATAGACATGGCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664615.1 ENST00000666226.1 |
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| CDS CCA 72 bp | AGCATGGCTGGGGAGGCCTCAGGAGACTTACAATCATaGCGGAAGCCAAAGGGGAAACAACGCACCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SMAGEASGDLQS*RKPKGKQRTFF Trigger: GAAGAAGGTGCGTTGTTTCCCCTTTGGCTTCCGCCATGATTGTAAGTCTCCTGAGGCCTCCCCAGCCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS CAA 90 bp | TCCCAGCTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTaGGACTGGATCCTGGCTCAGAGGGTCCTACGTCCACGGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SQLSALHWKDAIYLF*DWILAQRVLRPRSL Trigger: GAGACTCCGTGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CCA 72 bp | GGAAGGATGCCATTTACTTATTCTTGGACTGGATCCTaGCTCAGAGGGTCCTACGTCCACGGAGTCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GRMPFTYSWTGS*LRGSYVHGVSL Trigger: CAGCGAGACTCCGTGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CAA 90 bp | TCCCAGCTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTaGGACTGGATCAGTTCAGCATGGCTGGGGAGGCCTCAGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: SQLSALHWKDAIYLF*DWISSAWLGRPQET Trigger: AGTCTCCTGAGGCCTCCCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS TCA 72 bp | GCTCCACAACTGGAATCCCAGAATAAGGGAGGCAGTTaGTGCAGGTCAGACTCATGGAGAAACAGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: APQLESQNKGGS*CRSDSWRNSRV Trigger: CACCCTGCTGTTTCTCCATGAGTCTGACCTGCATCAACTGCCTCCCTTATTCTGGGATTCCAGTTGTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS GCA 72 bp | CCTACCCAACCATCGCTTTTTCAGGCTGAAGAGTTCTaGCAGGAGGCAAAGGTTGCAGTCAGCCAAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: PTQPSLFQAEEF*QEAKVAVSQDP Trigger: AGGATCTTGGCTGACTGCAACCTTTGCCTCCTGGCAGAACTCTTCAGCCTGAAAAAGCGATGGTTGGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657600.1 ENST00000663543.1 |
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| CDS CCA 72 bp | CAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCCTGGCTCAGAGGGTCCTACGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QLSTGRMPFTYS*TGSWLRGSYVH Trigger: GTGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CCA 72 bp | AAGCCAAAGGGGAAACAACGCACCTTCTTCACAAGGTaGCAAAAAGGAGAAGTGCCGAGCGAAGCGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: KPKGKQRTFFTR*QKGEVPSEAGR Trigger: TCTTCCCGCTTCGCTCGGCACTTCTCCTTTTTGCCACCTTGTGAAGAAGGTGCGTTGTTTCCCCTTTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS CCA 72 bp | CAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCAGTTCAGCATGGCTGGGGAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLSTGRMPFTYS*TGSVQHGWGGL Trigger: GAGGCCTCCCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS TCA 72 bp | CAGCAGGGTGAATTCTGGATCTGGTCTGAGGACAGTTaGGCAAAGGTACATGGATGGGGATCCATCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: QQGEFWIWSEDS*AKVHGWGSISS Trigger: GCTAGAGATGGATCCCCATCCATGTACCTTTGCTCAACTGTCCTCAGACCAGATCCAGAATTCACCCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418567.2 ENST00000656630.1 |
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| CDS TCA 72 bp | GTTCAGCACAGTGCTCCTCCATCAGTGCAGCTTGGTTaGTGTACCAACCAGGATCCTGGCAAGAAACAGATG | + |
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Preference number: 6 (lower is better) Translates to: VQHSAPPSVQLG*CTNQDPGKKQM Trigger: CATCTGTTTCTTGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 72 bp | ATCCCAATGTCCTACCCAACCATCGCTTTTTCAGGCTaGAGAGTTCTGCCAGGAGGCAAAGGTTGCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: IPMSYPTIAFSG*RVLPGGKGCSQ Trigger: CTGACTGCAACCTTTGCCTCCTGGCAGAACTCTTCAGCCTGAAAAAGCGATGGTTGGGTAGGACATTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657600.1 ENST00000663543.1 |
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| CDS CAA 72 bp | TCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTaGGACTGGATCCTGGCTCAGAGGGTCCTACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SALHWKDAIYLF*DWILAQRVLRP Trigger: TGGACGTAGGACCCTCTGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS CAA 72 bp | TCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTaGGACTGGATCAGTTCAGCATGGCTGGGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SALHWKDAIYLF*DWISSAWLGRP Trigger: AGGCCTCCCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS CAA 90 bp | GCTTCATTCCTAAAGTTCAGCACAGTGCTCCTCCATCAGTGCAGCTaGGTTGATGTACCAACCAGGATCCTGGCAAGAAACAGATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ASFLKFSTVLLHQCS*VDVPTRILARNRWH Trigger: GTGCCATCTGTTTCTTGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAACTTTAGGAATGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CAA 90 bp | TCCCAGCTGTCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTaGGACTGGATCCTGGAAAATCGGGTCACTCCTACCCGAATACTG | + |
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Preference number: 6 (lower is better) Translates to: SQLSALHWKDAIYLF*DWILENRVTPTRIL Trigger: CAGTATTCGGGTAGGAGTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS GCA 72 bp | TCATTCCTAAAGTTCAGCACAGTGCTCCTCCATCAGTaGAGCTTGGTTGATGTACCAACCAGGATCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SFLKFSTVLLHQ*SLVDVPTRILA Trigger: TGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAACTTTAGGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CCA 72 bp | GCCATTTACTTATTCTTGGACTGGATCAGTTCAGCATaGCTGGGGAGGCCTCAGGAGACTTACAATCATGGC | + |
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Preference number: 6 (lower is better) Translates to: AIYLFLDWISSA*LGRPQETYNHG Trigger: GCCATGATTGTAAGTCTCCTGAGGCCTCCCCAGCCATGCTGAACTGATCCAGTCCAAGAATAAGTAAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS CCA 72 bp | CAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCCTGGAAAATCGGGTCACTCCTACCC | + |
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Preference number: 6 (lower is better) Translates to: QLSTGRMPFTYS*TGSWKIGSLLP Trigger: GGGTAGGAGTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS CAA 72 bp | AGTTCAGCACAGTGCTCCTCCATCAGTGCAGCTTGGTaGATGTACCAACCAGGATCCTGGCAAGAAACAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSAQCSSISAAW*MYQPGSWQETD Trigger: ATCTGTTTCTTGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CAA 72 bp | CTAAAGTTCAGCACAGTGCTCCTCCATCAGTGCAGCTaGGTTGATGTACCAACCAGGATCCTGGCAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LKFSTVLLHQCS*VDVPTRILARN Trigger: GTTTCTTGCCAGGATCCTGGTTGGTACATCAACCAAGCTGCACTGATGGAGGAGCACTGTGCTGAACTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 72 bp | GTTGATGCAGGTCAGACTCATGGAGAAACAGCAGGGTaGATTCTGGATCTTGTTTCAATCCCAGCTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VDAGQTHGETAG*ILDLVSIPAVS Trigger: GCTGACAGCTGGGATTGAAACAAGATCCAGAATTCACCCTGCTGTTTCTCCATGAGTCTGACCTGCATCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000657600.1 ENST00000658550.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS GCA 72 bp | GTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCCTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VSIPAVSSPLEG*HLLILGLDPGS Trigger: TGAGCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660637.1 ENST00000669534.1 |
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| CDS GCA 72 bp | GTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCAGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSIPAVSSPLEG*HLLILGLDQPV Trigger: GACAGGCTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664615.1 ENST00000666226.1 |
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| CDS CCA 72 bp | TGTTGGAAAGAGCCTGGCTTCCAGTGGGGATATAGTTaGACTAAAGAAGTTGGATACAGCCAGCCCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: CWKEPGFQWGYS*TKEVGYSQPRM Trigger: CATTCTGGGCTGGCTGTATCCAACTTCTTTAGTCCAACTATATCCCCACTGGAAGCCAGGCTCTTTCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CCA 72 bp | ATGGGTGACAGCTGTTGGAAAGAGCCTGGCTTCCAGTaGGGATATAGTTGGACTAAAGAAGTTGGATACAGC | + |
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Preference number: 6 (lower is better) Translates to: MGDSCWKEPGFQ*GYSWTKEVGYS Trigger: GCTGTATCCAACTTCTTTAGTCCAACTATATCCCCACTGGAAGCCAGGCTCTTTCCAACAGCTGTCACCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CAA 72 bp | TCAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTaGGACTGGATCCTGGAAAATCGGGTCACTCCTACC | + |
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Preference number: 6 (lower is better) Translates to: SALHWKDAIYLF*DWILENRVTPT Trigger: GGTAGGAGTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS GCA 72 bp | GTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCAGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSIPAVSSPLEG*HLLILGLDQFS Trigger: GCTGAACTGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657600.1 ENST00000663543.1 ENST00000668303.1 ENST00000670435.1 |
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| CDS CCA 72 bp | GGAAGGATGCCATTTACTTATTCTTGGACTGGATCCTaGAAAATCGGGTCACTCCTACCCGAATACTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GRMPFTYSWTGS*KIGSLLPEYCA Trigger: AGCACAGTATTCGGGTAGGAGTGACCCGATTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS GCA 72 bp | GTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCCTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VSIPAVSSPLEG*HLLILGLDPGK Trigger: TTTTCCAGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666700.1 ENST00000668266.1 |
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| CDS TCA 72 bp | GGCAAGAAACAGATGGCACACTCAAATTGGGTGCTTTaGAGAGAGATAGTAGGGGGACCATTTATTAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GKKQMAHSNWVL*REIVGGPFIKV Trigger: CACCTTAATAAATGGTCCCCCTACTATCTCTCTTCAAAGCACCCAATTTGAGTGTGCCATCTGTTTCTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 72 bp | GTTGATGCAGGTCAGACTCATGGAGAAACAGCAGGGTaGATTCTGGATTTTGAAAGTTGGGGTCAAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: VDAGQTHGETAG*ILDFESWGQIL Trigger: AAGGATTTGACCCCAACTTTCAAAATCCAGAATTCACCCTGCTGTTTCTCCATGAGTCTGACCTGCATCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657995.1 ENST00000665153.1 |
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| CDS GCA 72 bp | GTTTCAATCCCAGCTGTCAGCTCTCCACTGGAAGGATaGCATTTACTTATTCTTGGACTGGATCCATATTAT | + |
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Preference number: 6 (lower is better) Translates to: VSIPAVSSPLEG*HLLILGLDPYY Trigger: ATAATATGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTGACAGCTGGGATTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658550.1 ENST00000667666.1 |
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| CDS TCA 72 bp | ATAGTAGGGGGACCATTTATTAAGGTGAAAGTAAGGTaGGGAAGCTACAAGTACTTTGAGGCTAGTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: IVGGPFIKVKVR*GSYKYFEASDS Trigger: ACTGTCACTAGCCTCAAAGTACTTGTAGCTTCCTCACCTTACTTTCACCTTAATAAATGGTCCCCCTACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 72 bp | CAAATACATATTTGGTTGGGATTTCAGAGTTACTCCTaGGTCAAGGCCCTGGAAAGTCTGAACCATTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: QIHIWLGFQSYS*VKALESLNHCL Trigger: TAAGCAATGGTTCAGACTTTCCAGGGCCTTGACTCAGGAGTAACTCTGAAATCCCAACCAAATATGTATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS CCA 72 bp | CAGCTCTCCACTGGAAGGATGCCATTTACTTATTCTTaGACTGGATCCATATTATCTTGCAATAAAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: QLSTGRMPFTYS*TGSILSCNKRP Trigger: AGGTCTTTTATTGCAAGATAATATGGATCCAGTCCAAGAATAAGTAAATGGCATCCTTCCAGTGGAGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658550.1 ENST00000667666.1 |
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| CDS CAA 72 bp | GGCAGCACAGAACTGATTGTTCATAAGGTTAAAATTTaGGCTTACGAAAGTTGTGCATCACAGAACAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GSTELIVHKVKI*AYESCASQNRH Trigger: ATGCCTGTTCTGTGATGCACAACTTTCGTAAGCCAAAATTTTAACCTTATGAACAATCAGTTCTGTGCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000418567.2 ENST00000656630.1 ENST00000656925.1 ENST00000657600.1 ENST00000657995.1 ENST00000658218.1 ENST00000658550.1 ENST00000660534.1 ENST00000660637.1 ENST00000663543.1 ENST00000664615.1 ENST00000665153.1 ENST00000666226.1 ENST00000666700.1 ENST00000667666.1 ENST00000668266.1 ENST00000668303.1 ENST00000668378.1 ENST00000669534.1 ENST00000670435.1 |
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| CDS TCA 72 bp | TCAACTGCAAAGTCATCTACAGAATGTAACCATATCTaGTTAGCAGTCTTCTTGATTTTGCAAGTTTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: STAKSSTECNHI*LAVFLILQVLS Trigger: GCTTAAAACTTGCAAAATCAAGAAGACTGCTAATCAGATATGGTTACATTCTGTAGATGACTTTGCAGTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658550.1 ENST00000667666.1 |
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