Pregenerated sensors for LINC02533 (Homo sapiens)
Ensembl gene IDs: ENSG00000260239Ensembl transcript IDs: ENST00000563079.1, ENST00000673975.1, ENST00000674020.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGGAGAAGGGTGGTCATGTGGGGACACAGGGAGAAGACGCCGTCTaGAAGCCCAGGAGAGTGGCCACAGGAGATACCAACACTGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VEKGGHVGTQGEDAV*KPRRVATGDTNTAD Trigger: GTCAGCAGTGTTGGTATCTCCTGTGGCCACTCTCCTGGGCTTGCAGACGGCGTCTTCTCCCTGTGTCCCCACATGACCACCCTTCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CCA 90 bp | CCACCTCAGACTCCAGAGTATGCTGGGCTGTGGCTGCCTGACAGGTaGACCTTGTCCTCTGGGAGTGTCTGTTCTTTCTCATCAGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: PPQTPEYAGLWLPDR*TLSSGSVCSFSSAG Trigger: CCCTGCTGATGAGAAAGAACAGACACTCCCAGAGGACAAGGTCCACCTGTCAGGCAGCCACAGCCCAGCATACTCTGGAGTCTGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS GCA 90 bp | ACAACTGACCCCCACCTCAGACTCCAGAGTATGCTGGGCTGTGGCTaGCTGACAGGTGGACCTTGTCCTCTGGGAGTGTCTGTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TTDPHLRLQSMLGCG*LTGGPCPLGVSVLS Trigger: AGAAAGAACAGACACTCCCAGAGGACAAGGTCCACCTGTCAGGCAGCCACAGCCCAGCATACTCTGGAGTCTGAGGTGGGGGTCAGTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CCA 90 bp | CCTGGCATGATCTTCTCATGGCCTATTGCCCCTAGGACTGCTCTGTaGACAGATAGGAGGAGGCAGGTCTACTTCCTGGGTCACCAAATG | + |
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Preference number: 5 (lower is better) Translates to: PGMIFSWPIAPRTAL*TDRRRQVYFLGHQM Trigger: CATTTGGTGACCCAGGAAGTAGACCTGCCTCCTCCTATCTGTCCACAGAGCAGTCCTAGGGGCAATAGGCCATGAGAAGATCATGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | GGCTTGGTTCCCAGAAGGAAAATCAGAGCCCTGGATCAGCAGGTATaGAGGCGTGGATGCTTTCAGAGTGCCTTTCCCCACTGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GLVPRRKIRALDQQV*RRGCFQSAFPHCSS Trigger: TGAAGAACAGTGGGGAAAGGCACTCTGAAAGCATCCACGCCTCCATACCTGCTGATCCAGGGCTCTGATTTTCCTTCTGGGAACCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 90 bp | GTTGCAGTGAGACTCTTGAGCCAGGCCTTACCCATCGCTTTCTCTTaGTTGGCATTGTTGCCAGGGAGTGAGAAAGTCAAGCTGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VAVRLLSQALPIAFS*LALLPGSEKVKLLL Trigger: AAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTGGCTCAAGAGTCTCACTGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | CTAGGACTGCTCTGTGGACAGATAGGAGGAGGCAGGTCTACTTCCTaGGTCACCAAATGCTCTGGAATCATAACCTCACCTTCTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LGLLCGQIGGGRSTS*VTKCSGIITSPSLL Trigger: GAGGAGAGAAGGTGAGGTTATGATTCCAGAGCATTTGGTGACCCAGGAAGTAGACCTGCCTCCTCCTATCTGTCCACAGAGCAGTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | GTGCCTTTCCCCACTGTTCTTCAAGAGGCCTGTACCAGTTTACACTaGCAGCTGCAGAATACGAACGTTCCAGGGTTCACAGCTGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VPFPTVLQEACTSLH*QLQNTNVPGFTAEF Trigger: AAACTCAGCTGTGAACCCTGGAACGTTCGTATTCTGCAGCTGCCAGTGTAAACTGGTACAGGCCTCTTGAAGAACAGTGGGGAAAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | AAGCCCAGGAGAGTGGCCACAGGAGATACCAACACTGCTGACACCTaGATCTTGGACTCCCAGCCTTCAAAGCAAGGTTATAGTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KPRRVATGDTNTADT*ILDSQPSKQGYSLS Trigger: AGAAAGACTATAACCTTGCTTTGAAGGCTGGGAGTCCAAGATCCAGGTGTCAGCAGTGTTGGTATCTCCTGTGGCCACTCTCCTGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS GCA 90 bp | CAGAGAAGGCTGAGGAAATTAGCAGGTAGAATCTACAGTGCAGGTTaGAGTGAGACTCTTGAGCCAGGCCTTACCCATCGCTTTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QRRLRKLAGRIYSAG*SETLEPGLTHRFLL Trigger: CAAGAGAAAGCGATGGGTAAGGCCTGGCTCAAGAGTCTCACTGCAACCTGCACTGTAGATTCTACCTGCTAATTTCCTCAGCCTTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 90 bp | TTCTCTTCATGTTCTTCACTGGCCATAAGTCCGAAGACATCCGGATaGTGTGGGATCCTGAATAGCTCTTGTGTCTTAGTCCTGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FSSCSSLAISPKTSG*CGILNSSCVLVLSF Trigger: GAAGGACAGGACTAAGACACAAGAGCTATTCAGGATCCCACAGCATCCGGATGTCTTCGGACTTATGGCCAGTGAAGAACATGAAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | AAATACCGTCTTCTGACCAGCCAGTTTCCATGGGGCATGTTTTCGTaGTTGCTGCACTCACTCCCATTGTTCCCTTCAGATGTGAATACA | + |
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Preference number: 5 (lower is better) Translates to: KYRLLTSQFPWGMFS*LLHSLPLFPSDVNT Trigger: TGTATTCACATCTGAAGGGAACAATGGGAGTGAGTGCAGCAACCACGAAAACATGCCCCATGGAAACTGGCTGGTCAGAAGACGGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 90 bp | CTTTCTCTTGCTTGGCATTGTTGCCAGGGAGTGAGAAAGTCAAGCTaGTGCTTTGCATTAGATCTCAGCCTTCCCAGGAGCACTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: LSLAWHCCQGVRKSS*CFALDLSLPRSTLF Trigger: AAATAAAGTGCTCCTGGGAAGGCTGAGATCTAATGCAAAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS TCA 90 bp | CTGAGTTTTTGTTTACATGGTAATATAGAAATGGACTGCCTGGCATaGTCTTCTCATGGCCTATTGCCCCTAGGACTGCTCTGTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: LSFCLHGNIEMDCLA*SSHGLLPLGLLCGQ Trigger: CTGTCCACAGAGCAGTCCTAGGGGCAATAGGCCATGAGAAGATCATGCCAGGCAGTCCATTTCTATATTACCATGTAAACAAAAACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 90 bp | GGGGGCAAGAAAGGCTTTATTTCATATGAGGCATATTGCAGGCAATaGTGTTTCCTGACCAAATGTAGATTTCGCTCTTCTTTATTGACA | + |
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Preference number: 5 (lower is better) Translates to: GGKKGFISYEAYCRQ*CFLTKCRFRSSLLT Trigger: TGTCAATAAAGAAGAGCGAAATCTACATTTGGTCAGGAAACAGCATTGCCTGCAATATGCCTCATATGAAATAAAGCCTTTCTTGCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | TTTGCATTAGATCTCAGCCTTCCCAGGAGCACTTTATTTGGTGAGTaGCCAAGACAATCAATATTTATTGTTCTGCCAATCGTGTTCATA | + |
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Preference number: 5 (lower is better) Translates to: FALDLSLPRSTLFGE*PRQSIFIVLPIVFI Trigger: TATGAACACGATTGGCAGAACAATAAATATTGATTGTCTTGGCCACTCACCAAATAAAGTGCTCCTGGGAAGGCTGAGATCTAATGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 90 bp | AGATTTCATTATCTTCAAAGAGCAGCAGTGACGTATGGCTTTATTTaGTTGCTAAACCATGTCAAGTTCACTTCCCTCATGAGAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: RFHYLQRAAVTYGFI*LLNHVKFTSLMRKG Trigger: TCCTTTTCTCATGAGGGAAGTGAACTTGACATGGTTTAGCAACCAAATAAAGCCATACGTCACTGCTGCTCTTTGAAGATAATGAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS GCA 72 bp | GGTGGTCATGTGGGGACACAGGGAGAAGACGCCGTCTaGAAGCCCAGGAGAGTGGCCACAGGAGATACCAAC | + |
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Preference number: 6 (lower is better) Translates to: GGHVGTQGEDAV*KPRRVATGDTN Trigger: GTTGGTATCTCCTGTGGCCACTCTCCTGGGCTTGCAGACGGCGTCTTCTCCCTGTGTCCCCACATGACCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS GCA 72 bp | CCCCACCTCAGACTCCAGAGTATGCTGGGCTGTGGCTaGCTGACAGGTGGACCTTGTCCTCTGGGAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PHLRLQSMLGCG*LTGGPCPLGVS Trigger: AGACACTCCCAGAGGACAAGGTCCACCTGTCAGGCAGCCACAGCCCAGCATACTCTGGAGTCTGAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CCA 72 bp | CACAGGGAGAAGACGCCGTCTGCAAGCCCAGGAGAGTaGCCACAGGAGATACCAACACTGCTGACACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: HREKTPSASPGE*PQEIPTLLTPG Trigger: TCCAGGTGTCAGCAGTGTTGGTATCTCCTGTGGCCACTCTCCTGGGCTTGCAGACGGCGTCTTCTCCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS TCA 72 bp | GTGAGCCACCGCGCCGGGCCCAGAGTTAGGGCATTCTaGAGCCCAAAACCAGAGAAGGCTGAGGAAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: VSHRAGPRVRAF*SPKPEKAEEIS Trigger: GCTAATTTCCTCAGCCTTCTCTGGTTTTGGGCTTCAGAATGCCCTAACTCTGGGCCCGGCGCGGTGGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS TCA 72 bp | ACCTCAGACTCCAGAGTATGCTGGGCTGTGGCTGCCTaGCAGGTGGACCTTGTCCTCTGGGAGTGTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TSDSRVCWAVAA*QVDLVLWECLF Trigger: GAACAGACACTCCCAGAGGACAAGGTCCACCTGTCAGGCAGCCACAGCCCAGCATACTCTGGAGTCTGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CCA 72 bp | ACATCCGGACACACAGAGACACCGGGGATGCTAAGGTaGAGAAGGGTGGTCATGTGGGGACACAGGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TSGHTETPGMLR*RRVVMWGHREK Trigger: CTTCTCCCTGTGTCCCCACATGACCACCCTTCTCCACCTTAGCATCCCCGGTGTCTCTGTGTGTCCGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS TCA 72 bp | GCCCAGGAGAGTGGCCACAGGAGATACCAACACTGCTaGCACCTGGATCTTGGACTCCCAGCCTTCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: AQESGHRRYQHC*HLDLGLPAFKA Trigger: TGCTTTGAAGGCTGGGAGTCCAAGATCCAGGTGTCAGCAGTGTTGGTATCTCCTGTGGCCACTCTCCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 90 bp | CAGACTCCAGAGTATGCTGGGCTGTGGCTGCCTGACAGGTGGACCTaGTCCTCTGGGAGTGTCTGTTCTTTCTCATCAGCAGGGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: QTPEYAGLWLPDRWT*SSGSVCSFSSAGML Trigger: AAGCATCCCTGCTGATGAGAAAGAACAGACACTCCCAGAGGACAAGGTCCACCTGTCAGGCAGCCACAGCCCAGCATACTCTGGAGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CCA 72 bp | AGTAAAGAAAGGAGGAGTGAGATGCTGAGGTCGTCCTaGGGCTGCCGCATCAGCCCAGGACGCTGTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SKERRSEMLRSS*GCRISPGRCSF Trigger: AAAACTACAGCGTCCTGGGCTGATGCGGCAGCCCCAGGACGACCTCAGCATCTCACTCCTCCTTTCTTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | ACTCCAGAGTATGCTGGGCTGTGGCTGCCTGACAGGTaGACCTTGTCCTCTGGGAGTGTCTGTTCTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TPEYAGLWLPDR*TLSSGSVCSFS Trigger: TGAGAAAGAACAGACACTCCCAGAGGACAAGGTCCACCTGTCAGGCAGCCACAGCCCAGCATACTCTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS GCA 72 bp | GGGCAGCCATGGGACACAGTTTGGATCCATAAGATGTaGAAGTGCAGCCTCAGAGTCTCTGGGGAAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GQPWDTVWIHKM*KCSLRVSGEAD Trigger: ATCTGCTTCCCCAGAGACTCTGAGGCTGCACTTGCACATCTTATGGATCCAAACTGTGTCCCATGGCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 72 bp | GGATCAGCAGGTATGGAGGCGTGGATGCTTTCAGAGTaGCTTTCCCCACTGTTCTTCAAGAGGCCTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: GSAGMEAWMLSE*LSPLFFKRPVP Trigger: TGGTACAGGCCTCTTGAAGAACAGTGGGGAAAGGCACTCTGAAAGCATCCACGCCTCCATACCTGCTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | ATCTTCTCATGGCCTATTGCCCCTAGGACTGCTCTGTaGACAGATAGGAGGAGGCAGGTCTACTTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: IFSWPIAPRTAL*TDRRRQVYFLG Trigger: ACCCAGGAAGTAGACCTGCCTCCTCCTATCTGTCCACAGAGCAGTCCTAGGGGCAATAGGCCATGAGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 90 bp | GCAGTGAGACTCTTGAGCCAGGCCTTACCCATCGCTTTCTCTTGCTaGGCATTGTTGCCAGGGAGTGAGAAAGTCAAGCTGCTGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: AVRLLSQALPIAFSC*ALLPGSEKVKLLLC Trigger: GCAAAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTGGCTCAAGAGTCTCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 72 bp | ATCAGAGCCCTGGATCAGCAGGTATGGAGGCGTGGATaGTTTCAGAGTGCCTTTCCCCACTGTTCTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IRALDQQVWRRG*FQSAFPHCSSR Trigger: TCTTGAAGAACAGTGGGGAAAGGCACTCTGAAAGCATCCACGCCTCCATACCTGCTGATCCAGGGCTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | GAAAATCAGAGCCCTGGATCAGCAGGTATGGAGGCGTaGATGCTTTCAGAGTGCCTTTCCCCACTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ENQSPGSAGMEA*MLSECLSPLFF Trigger: GAAGAACAGTGGGGAAAGGCACTCTGAAAGCATCCACGCCTCCATACCTGCTGATCCAGGGCTCTGATTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | CTGACCAGCCAGTTTCCATGGGGCATGTTTTCGTGGTaGCTGCACTCACTCCCATTGTTCCCTTCAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: LTSQFPWGMFSW*LHSLPLFPSDV Trigger: CACATCTGAAGGGAACAATGGGAGTGAGTGCAGCAACCACGAAAACATGCCCCATGGAAACTGGCTGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | CAGGCCTTACCCATCGCTTTCTCTTGCTTGGCATTGTaGCCAGGGAGTGAGAAAGTCAAGCTGCTGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: QALPIAFSCLAL*PGSEKVKLLLC Trigger: GCAAAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | AGCCAGGCCTTACCCATCGCTTTCTCTTGCTTGGCATaGTTGCCAGGGAGTGAGAAAGTCAAGCTGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SQALPIAFSCLA*LPGSEKVKLLL Trigger: AAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | CTCTTGAGCCAGGCCTTACCCATCGCTTTCTCTTGCTaGGCATTGTTGCCAGGGAGTGAGAAAGTCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLSQALPIAFSC*ALLPGSEKVKL Trigger: CAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTGGCTCAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 72 bp | AGGCCTTACCCATCGCTTTCTCTTGCTTGGCATTGTTaGCAGGGAGTGAGAAAGTCAAGCTGCTGCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RPYPSLSLAWHC*QGVRKSSCCFA Trigger: TGCAAAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 72 bp | CTGAGGAAATTAGCAGGTAGAATCTACAGTGCAGGTTaGAGTGAGACTCTTGAGCCAGGCCTTACCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: LRKLAGRIYSAG*SETLEPGLTHR Trigger: GCGATGGGTAAGGCCTGGCTCAAGAGTCTCACTGCAACCTGCACTGTAGATTCTACCTGCTAATTTCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | CTTCTGACCAGCCAGTTTCCATGGGGCATGTTTTCGTaGTTGCTGCACTCACTCCCATTGTTCCCTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LLTSQFPWGMFS*LLHSLPLFPSD Trigger: ATCTGAAGGGAACAATGGGAGTGAGTGCAGCAACCACGAAAACATGCCCCATGGAAACTGGCTGGTCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | CTCTGTGGACAGATAGGAGGAGGCAGGTCTACTTCCTaGGTCACCAAATGCTCTGGAATCATAACCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: LCGQIGGGRSTS*VTKCSGIITSP Trigger: AGGTGAGGTTATGATTCCAGAGCATTTGGTGACCCAGGAAGTAGACCTGCCTCCTCCTATCTGTCCACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | AGAGTGGCCACAGGAGATACCAACACTGCTGACACCTaGATCTTGGACTCCCAGCCTTCAAAGCAAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: RVATGDTNTADT*ILDSQPSKQGY Trigger: ATAACCTTGCTTTGAAGGCTGGGAGTCCAAGATCCAGGTGTCAGCAGTGTTGGTATCTCCTGTGGCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 90 bp | CTCTTGAGCCAGGCCTTACCCATCGCTTTCTCTTGCTTGGCATTGTaGCCAGGGAGTGAGAAAGTCAAGCTGCTGCTTTGCATTAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LLSQALPIAFSCLAL*PGSEKVKLLLCIRS Trigger: AGATCTAATGCAAAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTGGCTCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 90 bp | AGACTCTTGAGCCAGGCCTTACCCATCGCTTTCTCTTGCTTGGCATaGTTGCCAGGGAGTGAGAAAGTCAAGCTGCTGCTTTGCATTAGA | + |
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Preference number: 6 (lower is better) Translates to: RLLSQALPIAFSCLA*LPGSEKVKLLLCIR Trigger: TCTAATGCAAAGCAGCAGCTTGACTTTCTCACTCCCTGGCAACAATGCCAAGCAAGAGAAAGCGATGGGTAAGGCCTGGCTCAAGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | GCCACAGGAGATACCAACACTGCTGACACCTGGATCTaGGACTCCCAGCCTTCAAAGCAAGGTTATAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ATGDTNTADTWI*DSQPSKQGYSL Trigger: AAGACTATAACCTTGCTTTGAAGGCTGGGAGTCCAAGATCCAGGTGTCAGCAGTGTTGGTATCTCCTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 90 bp | TACCGTCTTCTGACCAGCCAGTTTCCATGGGGCATGTTTTCGTGGTaGCTGCACTCACTCCCATTGTTCCCTTCAGATGTGAATACACAT | + |
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Preference number: 6 (lower is better) Translates to: YRLLTSQFPWGMFSW*LHSLPLFPSDVNTH Trigger: ATGTGTATTCACATCTGAAGGGAACAATGGGAGTGAGTGCAGCAACCACGAAAACATGCCCCATGGAAACTGGCTGGTCAGAAGACGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 72 bp | TGTTCTTCACTGGCCATAAGTCCGAAGACATCCGGATaGTGTGGGATCCTGAATAGCTCTTGTGTCTTAGTC | + |
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Preference number: 6 (lower is better) Translates to: CSSLAISPKTSG*CGILNSSCVLV Trigger: GACTAAGACACAAGAGCTATTCAGGATCCCACAGCATCCGGATGTCTTCGGACTTATGGCCAGTGAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS GCA 72 bp | CCATGGGACACAGTTTGGATCCATAAGATGTGCAAGTaGAGCCTCAGAGTCTCTGGGGAAGCAGATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PWDTVWIHKMCK*SLRVSGEADFL Trigger: AAGAAAATCTGCTTCCCCAGAGACTCTGAGGCTGCACTTGCACATCTTATGGATCCAAACTGTGTCCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | CATAGATTCAGGATTGCATCCGCAGCACCTAGAACATaGCCTGGAGAGAGTGGGCACTCAACATCTATTTGT | + |
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Preference number: 6 (lower is better) Translates to: HRFRIASAAPRT*PGESGHSTSIC Trigger: ACAAATAGATGTTGAGTGCCCACTCTCTCCAGGCCATGTTCTAGGTGCTGCGGATGCAATCCTGAATCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | CCCAGCCTTCAAAGCAAGGTTATAGTCTTTCTGGTGTaGGGTACGGTGGGTTCCTCTTCAAAGAAGAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PSLQSKVIVFLV*GTVGSSSKKSQ Trigger: CTGACTCTTCTTTGAAGAGGAACCCACCGTACCCAACACCAGAAAGACTATAACCTTGCTTTGAAGGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 72 bp | ACGCAGCTGAATGCCATCCTTTCTGATACAAGGAACTaGAGGCCCAGGAAGTTTCATTTGTCCAAGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: TQLNAILSDTRN*RPRKFHLSKVM Trigger: CATGACCTTGGACAAATGAAACTTCCTGGGCCTCAAGTTCCTTGTATCAGAAAGGATGGCATTCAGCTGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS TCA 72 bp | ATACACATCATAAAATGTCAGATGACTTCCTCCAGCTaGCATGCTGACTCTGACTCAGCTCTGCCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: IHIIKCQMTSSS*HADSDSALPFS Trigger: AGAGAAGGGCAGAGCTGAGTCAGAGTCAGCATGTCAGCTGGAGGAAGTCATCTGACATTTTATGATGTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS TCA 72 bp | GGTTGCTGCACTCACTCCCATTGTTCCCTTCAGATGTaGATACACATCATAAAATGTCAGATGACTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GCCTHSHCSLQM*IHIIKCQMTSS Trigger: GGAGGAAGTCATCTGACATTTTATGATGTGTATTCACATCTGAAGGGAACAATGGGAGTGAGTGCAGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS TCA 72 bp | AGCAAACATCTTAGTGGAGAAAGGTTTTCTGCAGCTTaGATCATTCTCCTAGGCTTGGTTCCCAGAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SKHLSGERFSAA*IILLGLVPRRK Trigger: TTTCCTTCTGGGAACCAAGCCTAGGAGAATGATTCAAGCTGCAGAAAACCTTTCTCCACTAAGATGTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 90 bp | CAGATTTCATTATCTTCAAAGAGCAGCAGTGACGTATGGCTTTATTaGGTTGCTAAACCATGTCAAGTTCACTTCCCTCATGAGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QISLSSKSSSDVWLY*VAKPCQVHFPHEKR Trigger: CCTTTTCTCATGAGGGAAGTGAACTTGACATGGTTTAGCAACCAAATAAAGCCATACGTCACTGCTGCTCTTTGAAGATAATGAAATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 72 bp | TTATCTTCAAAGAGCAGCAGTGACGTATGGCTTTATTaGGTTGCTAAACCATGTCAAGTTCACTTCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSSKSSSDVWLY*VAKPCQVHFPH Trigger: ATGAGGGAAGTGAACTTGACATGGTTTAGCAACCAAATAAAGCCATACGTCACTGCTGCTCTTTGAAGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 90 bp | TTTCATTATCTTCAAAGAGCAGCAGTGACGTATGGCTTTATTTGGTaGCTAAACCATGTCAAGTTCACTTCCCTCATGAGAAAAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: FHYLQRAAVTYGFIW*LNHVKFTSLMRKGH Trigger: ATGTCCTTTTCTCATGAGGGAAGTGAACTTGACATGGTTTAGCAACCAAATAAAGCCATACGTCACTGCTGCTCTTTGAAGATAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS GCA 72 bp | GATCGGAAGAGCCCTCAAAAACACTTTGAGATTATGTaGATTTGCAAGTATTTTGGGAAGAGACTTGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: DRKSPQKHFEIM*ICKYFGKRLGK Trigger: TTTACCAAGTCTCTTCCCAAAATACTTGCAAATGCACATAATCTCAAAGTGTTTTTGAGGGCTCTTCCGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000563079.1 ENST00000673975.1 ENST00000674020.1 |
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| CDS GCA 72 bp | AAAGGCTTTATTTCATATGAGGCATATTGCAGGCAATaGTGTTTCCTGACCAAATGTAGATTTCGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: KGFISYEAYCRQ*CFLTKCRFRSS Trigger: AGAAGAGCGAAATCTACATTTGGTCAGGAAACAGCATTGCCTGCAATATGCCTCATATGAAATAAAGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CCA 72 bp | CAGATTTCATTATCTTCAAAGAGCAGCAGTGACGTATaGCTTTATTTGGTTGCTAAACCATGTCAAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QISLSSKSSSDV*LYLVAKPCQVH Trigger: GTGAACTTGACATGGTTTAGCAACCAAATAAAGCCATACGTCACTGCTGCTCTTTGAAGATAATGAAATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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| CDS CAA 72 bp | TGTTTCCTGACCAAATGTAGATTTCGCTCTTCTTTATaGACAGAACTTTCCTTTCATGTACGGTTGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: CFLTKCRFRSSL*TELSFHVRLQC Trigger: ACACTGCAACCGTACATGAAAGGAAAGTTCTGTCAATAAAGAAGAGCGAAATCTACATTTGGTCAGGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563079.1 ENST00000673975.1 |
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| CDS CAA 72 bp | TTTTCAAAGAGTAACTTCCTCGTTCTTTATGCCCCCTaGCCTCTAATTATGGTAAACAATCTTCCCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: FSKSNFLVLYAP*PLIMVNNLPIS Trigger: ACTGATGGGAAGATTGTTTACCATAATTAGAGGCAAGGGGGCATAAAGAACGAGGAAGTTACTCTTTGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674020.1 |
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