Pregenerated sensors for LINC02499 (Homo sapiens)
Ensembl gene IDs: ENSG00000250436Ensembl transcript IDs: ENST00000502291.1, ENST00000504368.1, ENST00000508147.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAAGTCTGTTTAGTAGGTCTAGATGAGAGCTTCAGATTCTGCATTTaGAACAAGCTGCCAGGCGACACACATGCTGCTGGTCCACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: EVCLVGLDESFRFCI*NKLPGDTHAAGPQS Trigger: GGACTGTGGACCAGCAGCATGTGTGTCGCCTGGCAGCTTGTTGCAAATGCAGAATCTGAAGCTCTCATCTAGACCTACTAAACAGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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| CDS CCA 90 bp | GAGCTTGCCAGGCTTAATTCGGCAAAGTCGGTGTTTCACACATCTTaGATCACCTCCATCTTCTTCATCATCTCCACTCACCAAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: ELARLNSAKSVFHTS*ITSIFFIISTHQNH Trigger: GTGATTTTGGTGAGTGGAGATGATGAAGAAGATGGAGGTGATCCAAGATGTGTGAAACACCGACTTTGCCGAATTAAGCCTGGCAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502291.1 |
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| CDS TCA 90 bp | GACACACATGCTGCTGGTCCACAGTCCACACTTTGCATAGCAAGTTaGCATAGGAATAGCATTTCTTTATCTAGAGGCATTCTGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: DTHAAGPQSTLCIAS*HRNSISLSRGILSS Trigger: AGAAGACAGAATGCCTCTAGATAAAGAAATGCTATTCCTATGTCAACTTGCTATGCAAAGTGTGGACTGTGGACCAGCAGCATGTGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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| CDS TCA 90 bp | TTCATAACTGTACCAATTGGTGAGTGCATTCTGAAGGTAACCATGTaGCTTAAAGGTCCTGTGCTTCTCATTGAAATCTCTCAACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FITVPIGECILKVTM*LKGPVLLIEISQLS Trigger: AGAAAGTTGAGAGATTTCAATGAGAAGCACAGGACCTTTAAGTCACATGGTTACCTTCAGAATGCACTCACCAATTGGTACAGTTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502291.1 ENST00000508147.1 |
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| CDS TCA 90 bp | TTTCTTTATCTAGAGGCATTCTGTCTTCTTTTCTTCTTGGCAACATaGCTAAACAGCTGTTTCATAGCAAGTAGACATGCCAGGAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: FLYLEAFCLLFFLAT*LNSCFIASRHARRV Trigger: TACTCTCCTGGCATGTCTACTTGCTATGAAACAGCTGTTTAGTCATGTTGCCAAGAAGAAAAGAAGACAGAATGCCTCTAGATAAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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| CDS TCA 72 bp | ATAATGTTGGAGCAGATACCAAATCTGCCAGTGCCTTaGTCTTGGAGGTCCCAGCCTCCAGAGCTTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IMLEQIPNLPVP*SWRSQPPELAR Trigger: CCTGGCAAGCTCTGGAGGCTGGGACCTCCAAGATCAAGGCACTGGCAGATTTGGTATCTGCTCCAACATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502291.1 |
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| CDS GCA 72 bp | CTGCATTTGCAACAAGCTGCCAGGCGACACACATGCTaGTGGTCCACAGTCCACACTTTGCATAGCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LHLQQAARRHTC*WSTVHTLHSKL Trigger: CAACTTGCTATGCAAAGTGTGGACTGTGGACCAGCAGCATGTGTGTCGCCTGGCAGCTTGTTGCAAATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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| CDS CAA 72 bp | CATAATGTTGGAGCAGATACCAAATCTGCCAGTGCCTaGATCTTGGAGGTCCCAGCCTCCAGAGCTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HNVGADTKSASA*ILEVPASRACQ Trigger: CTGGCAAGCTCTGGAGGCTGGGACCTCCAAGATCAAGGCACTGGCAGATTTGGTATCTGCTCCAACATTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502291.1 |
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| CDS TCA 72 bp | CCTTCCCCTTGGAATGGCACTGGCTGTTCACAGGATTaGGTGACCTTGCTGGATAGGATAGCCTGTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: PSPWNGTGCSQD*VTLLDRIACLE Trigger: CTCTAAACAGGCTATCCTATCCAGCAAGGTCACTCAATCCTGTGAACAGCCAGTGCCATTCCAAGGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504368.1 |
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| CDS GCA 72 bp | ATTCTGCATTTGCAACAAGCTGCCAGGCGACACACATaGTGCTGGTCCACAGTCCACACTTTGCATAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ILHLQQAARRHT*CWSTVHTLHSK Trigger: CTTGCTATGCAAAGTGTGGACTGTGGACCAGCAGCATGTGTGTCGCCTGGCAGCTTGTTGCAAATGCAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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| CDS GCA 72 bp | TTAGTAGGTCTAGATGAGAGCTTCAGATTCTGCATTTaGAACAAGCTGCCAGGCGACACACATGCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LVGLDESFRFCI*NKLPGDTHAAG Trigger: ACCAGCAGCATGTGTGTCGCCTGGCAGCTTGTTGCAAATGCAGAATCTGAAGCTCTCATCTAGACCTACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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| CDS GCA 72 bp | GTCTGTTTAGTAGGTCTAGATGAGAGCTTCAGATTCTaGATTTGCAACAAGCTGCCAGGCGACACACATGCT | + |
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Preference number: 6 (lower is better) Translates to: VCLVGLDESFRF*ICNKLPGDTHA Trigger: AGCATGTGTGTCGCCTGGCAGCTTGTTGCAAATGCAGAATCTGAAGCTCTCATCTAGACCTACTAAACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508147.1 |
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