Pregenerated sensors for LINC02496 (Homo sapiens)
Ensembl gene IDs: ENSG00000249066Ensembl transcript IDs: ENST00000509559.2, ENST00000655846.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | CAGTCAAGTAGGTGTCACAGCTCCGAGGGCTGGCTGGCTGTCAGCTaGGGTGAAGGGGTAAACTGGGCCAGTCTTTGTTATCCAGCAGGT | + |
Preference number: 5 (lower is better) Translates to: QSSRCHSSEGWLAVS*GEGVNWASLCYPAG Trigger: ACCTGCTGGATAACAAAGACTGGCCCAGTTTACCCCTTCACCTCAGCTGACAGCCAGCCAGCCCTCGGAGCTGTGACACCTACTTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS TCA 90 bp | CTGGTTCGGGTTAGCATGTTGGATTTCTACCATCAGCTGGTGATGTaGCTGGGGCTGGTGATTTGCTTGGGGCTGAAGAGTTTAGGATGG | + |
Preference number: 5 (lower is better) Translates to: LVRVSMLDFYHQLVM*LGLVICLGLKSLGW Trigger: CCATCCTAAACTCTTCAGCCCCAAGCAAATCACCAGCCCCAGTCACATCACCAGCTGATGGTAGAAATCCAACATGCTAACCCGAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS TCA 90 bp | GCGCAGTGCCTGCAGGAACAGCTTCACTGCCTGTCTTATTTCTCCTaGAGGCACATTCCAAGTCTGGTGGTCAAAGAAGCCCTATTTTAT | + |
Preference number: 5 (lower is better) Translates to: AQCLQEQLHCLSYFS*RHIPSLVVKEALFY Trigger: ATAAAATAGGGCTTCTTTGACCACCAGACTTGGAATGTGCCTTCAGGAGAAATAAGACAGGCAGTGAAGCTGTTCCTGCAGGCACTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS GCA 90 bp | TTTATGTTACAGGTACCAGCTGGTTCTTCTTATTTATCAAGCAGATaGAGTCAAGTAGGTGTCACAGCTCCGAGGGCTGGCTGGCTGTCA | + |
Preference number: 5 (lower is better) Translates to: FMLQVPAGSSYLSSR*SQVGVTAPRAGWLS Trigger: TGACAGCCAGCCAGCCCTCGGAGCTGTGACACCTACTTGACTGCATCTGCTTGATAAATAAGAAGAACCAGCTGGTACCTGTAACATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CCA 90 bp | TGGTTGAAGAAAGAGAGATTTTATGGAGAGTCTAGAGACCTCATCTaGCTTTGCATCACTTATCAACATATTCCCCCTGCAAGCGCAGTG | + |
Preference number: 5 (lower is better) Translates to: WLKKERFYGESRDLI*LCITYQHIPPASAV Trigger: CACTGCGCTTGCAGGGGGAATATGTTGATAAGTGATGCAAAGCCAGATGAGGTCTCTAGACTCTCCATAAAATCTCTCTTTCTTCAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CCA 90 bp | ATAATAGCCACCATTTTATTAGTTTGCCAGTCTTGGGTCAGCTGCTaGGTTATTCCTCTGGTTCGGGTTAGCATGTTGGATTTCTACCAT | + |
Preference number: 5 (lower is better) Translates to: IIATILLVCQSWVSC*VIPLVRVSMLDFYH Trigger: ATGGTAGAAATCCAACATGCTAACCCGAACCAGAGGAATAACCCAGCAGCTGACCCAAGACTGGCAAACTAATAAAATGGTGGCTATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CCA 90 bp | AAGCCAAAACTTATAATAGCCACCATTTTATTAGTTTGCCAGTCTTaGGTCAGCTGCTGGGTTATTCCTCTGGTTCGGGTTAGCATGTTG | + |
Preference number: 5 (lower is better) Translates to: KPKLIIATILLVCQS*VSCWVIPLVRVSML Trigger: CAACATGCTAACCCGAACCAGAGGAATAACCCAGCAGCTGACCCAAGACTGGCAAACTAATAAAATGGTGGCTATTATAAGTTTTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CCA 90 bp | CAGATGATGGTTGTGCTGGGCCTTGCAGATAGAAGTAAGATAACCTaGTTGAAGAAAGAGAGATTTTATGGAGAGTCTAGAGACCTCATC | + |
Preference number: 5 (lower is better) Translates to: QMMVVLGLADRSKIT*LKKERFYGESRDLI Trigger: GATGAGGTCTCTAGACTCTCCATAAAATCTCTCTTTCTTCAACCAGGTTATCTTACTTCTATCTGCAAGGCCCAGCACAACCATCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS TCA 90 bp | AAAGTTCCAATGGTCCATCACGTTTCAATTCTTTGCTTGTCTCACTaGTCAAAGAAAGTGACATGGTCAAGTCTATTGTCAGTGGACAAG | + |
Preference number: 5 (lower is better) Translates to: KVPMVHHVSILCLSH*SKKVTWSSLLSVDK Trigger: CTTGTCCACTGACAATAGACTTGACCATGTCACTTTCTTTGATCAGTGAGACAAGCAAAGAATTGAAACGTGATGGACCATTGGAACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CCA 90 bp | TTTGTTTCTGTATTCTTGCTGTTCTTTTATGTTACAGGTACCAGCTaGTTCTTCTTATTTATCAAGCAGATGCAGTCAAGTAGGTGTCAC | + |
Preference number: 5 (lower is better) Translates to: FVSVFLLFFYVTGTS*FFLFIKQMQSSRCH Trigger: GTGACACCTACTTGACTGCATCTGCTTGATAAATAAGAAGAACCAGCTGGTACCTGTAACATAAAAGAACAGCAAGAATACAGAAACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS TCA 72 bp | TCACAGCTCCGAGGGCTGGCTGGCTGTCAGCTGAGGTaGAGGGGTAAACTGGGCCAGTCTTTGTTATCCAGC | + |
Preference number: 6 (lower is better) Translates to: SQLRGLAGCQLR*RGKLGQSLLSS Trigger: GCTGGATAACAAAGACTGGCCCAGTTTACCCCTTCACCTCAGCTGACAGCCAGCCAGCCCTCGGAGCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS GCA 72 bp | CATCTGGCTTTGCATCACTTATCAACATATTCCCCCTaGAAGCGCAGTGCCTGCAGGAACAGCTTCACTGCC | + |
Preference number: 6 (lower is better) Translates to: HLALHHLSTYSP*KRSACRNSFTA Trigger: GGCAGTGAAGCTGTTCCTGCAGGCACTGCGCTTGCAGGGGGAATATGTTGATAAGTGATGCAAAGCCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS GCA 72 bp | CAGGTACCAGCTGGTTCTTCTTATTTATCAAGCAGATaGAGTCAAGTAGGTGTCACAGCTCCGAGGGCTGGC | + |
Preference number: 6 (lower is better) Translates to: QVPAGSSYLSSR*SQVGVTAPRAG Trigger: GCCAGCCCTCGGAGCTGTGACACCTACTTGACTGCATCTGCTTGATAAATAAGAAGAACCAGCTGGTACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CAA 72 bp | GTTGCAACTTTCTTGTTTGGCATTAGGGCTCCTCCGTaGGGATGGCTTGTTTCTGCTGCAGGTGGTTCCTAC | + |
Preference number: 6 (lower is better) Translates to: VATFLFGIRAPP*GWLVSAAGGSY Trigger: GTAGGAACCACCTGCAGCAGAAACAAGCCATCCCAACGGAGGAGCCCTAATGCCAAACAAGAAAGTTGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS TCA 72 bp | GTTAGCATGTTGGATTTCTACCATCAGCTGGTGATGTaGCTGGGGCTGGTGATTTGCTTGGGGCTGAAGAGT | + |
Preference number: 6 (lower is better) Translates to: VSMLDFYHQLVM*LGLVICLGLKS Trigger: ACTCTTCAGCCCCAAGCAAATCACCAGCCCCAGTCACATCACCAGCTGATGGTAGAAATCCAACATGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CCA 72 bp | TTGCAACTTTCTTGTTTGGCATTAGGGCTCCTCCGTTaGGATGGCTTGTTTCTGCTGCAGGTGGTTCCTACA | + |
Preference number: 6 (lower is better) Translates to: LQLSCLALGLLR*DGLFLLQVVPT Trigger: TGTAGGAACCACCTGCAGCAGAAACAAGCCATCCCAACGGAGGAGCCCTAATGCCAAACAAGAAAGTTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CCA 72 bp | GGGCTGGTGATTTGCTTGGGGCTGAAGAGTTTAGGATaGTTGCAACTTTCTTGTTTGGCATTAGGGCTCCTC | + |
Preference number: 6 (lower is better) Translates to: GLVICLGLKSLG*LQLSCLALGLL Trigger: GAGGAGCCCTAATGCCAAACAAGAAAGTTGCAACCATCCTAAACTCTTCAGCCCCAAGCAAATCACCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CCA 72 bp | TTTGCCAGTCTTGGGTCAGCTGCTGGGTTATTCCTCTaGTTCGGGTTAGCATGTTGGATTTCTACCATCAGC | + |
Preference number: 6 (lower is better) Translates to: FASLGSAAGLFL*FGLACWISTIS Trigger: GCTGATGGTAGAAATCCAACATGCTAACCCGAACCAGAGGAATAACCCAGCAGCTGACCCAAGACTGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CAA 72 bp | CTGGTGATTTGCTTGGGGCTGAAGAGTTTAGGATGGTaGCAACTTTCTTGTTTGGCATTAGGGCTCCTCCGT | + |
Preference number: 6 (lower is better) Translates to: LVICLGLKSLGW*QLSCLALGLLR Trigger: ACGGAGGAGCCCTAATGCCAAACAAGAAAGTTGCAACCATCCTAAACTCTTCAGCCCCAAGCAAATCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CCA 72 bp | ACCATTTTATTAGTTTGCCAGTCTTGGGTCAGCTGCTaGGTTATTCCTCTGGTTCGGGTTAGCATGTTGGAT | + |
Preference number: 6 (lower is better) Translates to: TILLVCQSWVSC*VIPLVRVSMLD Trigger: ATCCAACATGCTAACCCGAACCAGAGGAATAACCCAGCAGCTGACCCAAGACTGGCAAACTAATAAAATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS GCA 72 bp | AGATTTTATGGAGAGTCTAGAGACCTCATCTGGCTTTaGATCACTTATCAACATATTCCCCCTGCAAGCGCA | + |
Preference number: 6 (lower is better) Translates to: RFYGESRDLIWL*ITYQHIPPASA Trigger: TGCGCTTGCAGGGGGAATATGTTGATAAGTGATGCAAAGCCAGATGAGGTCTCTAGACTCTCCATAAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CAA 72 bp | ACTTATAATAGCCACCATTTTATTAGTTTGCCAGTCTaGGGTCAGCTGCTGGGTTATTCCTCTGGTTCGGGT | + |
Preference number: 6 (lower is better) Translates to: TYNSHHFISLPV*GQLLGYSSGSG Trigger: ACCCGAACCAGAGGAATAACCCAGCAGCTGACCCAAGACTGGCAAACTAATAAAATGGTGGCTATTATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CAA 90 bp | ATGATGGTTGTGCTGGGCCTTGCAGATAGAAGTAAGATAACCTGGTaGAAGAAAGAGAGATTTTATGGAGAGTCTAGAGACCTCATCTGG | + |
Preference number: 6 (lower is better) Translates to: MMVVLGLADRSKITW*KKERFYGESRDLIW Trigger: CCAGATGAGGTCTCTAGACTCTCCATAAAATCTCTCTTTCTTCAACCAGGTTATCTTACTTCTATCTGCAAGGCCCAGCACAACCATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS GCA 72 bp | AAGCCAAAACTTATAATAGCCACCATTTTATTAGTTTaGCAGTCTTGGGTCAGCTGCTGGGTTATTCCTCTG | + |
Preference number: 6 (lower is better) Translates to: KPKLIIATILLV*QSWVSCWVIPL Trigger: CAGAGGAATAACCCAGCAGCTGACCCAAGACTGGCAAACTAATAAAATGGTGGCTATTATAAGTTTTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS CCA 72 bp | AAAGAGAGATTTTATGGAGAGTCTAGAGACCTCATCTaGCTTTGCATCACTTATCAACATATTCCCCCTGCA | + |
Preference number: 6 (lower is better) Translates to: KERFYGESRDLI*LCITYQHIPPA Trigger: TGCAGGGGGAATATGTTGATAAGTGATGCAAAGCCAGATGAGGTCTCTAGACTCTCCATAAAATCTCTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS TCA 72 bp | TTTCAATTCTTTGCTTGTCTCACTGATCAAAGAAAGTaGCATGGTCAAGTCTATTGTCAGTGGACAAGAGGA | + |
Preference number: 6 (lower is better) Translates to: FQFFACLTDQRK*HGQVYCQWTRG Trigger: TCCTCTTGTCCACTGACAATAGACTTGACCATGTCACTTTCTTTGATCAGTGAGACAAGCAAAGAATTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS TCA 72 bp | ATGGTCCATCACGTTTCAATTCTTTGCTTGTCTCACTaGTCAAAGAAAGTGACATGGTCAAGTCTATTGTCA | + |
Preference number: 6 (lower is better) Translates to: MVHHVSILCLSH*SKKVTWSSLLS Trigger: TGACAATAGACTTGACCATGTCACTTTCTTTGATCAGTGAGACAAGCAAAGAATTGAAACGTGATGGACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CAA 90 bp | CAGCAAAAGAAGAAAAGTTCCAATGGTCCATCACGTTTCAATTCTTaGCTTGTCTCACTGATCAAAGAAAGTGACATGGTCAAGTCTATT | + |
Preference number: 6 (lower is better) Translates to: QQKKKSSNGPSRFNS*LVSLIKESDMVKSI Trigger: AATAGACTTGACCATGTCACTTTCTTTGATCAGTGAGACAAGCAAAGAATTGAAACGTGATGGACCATTGGAACTTTTCTTCTTTTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509559.2 ENST00000655846.1 |
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CDS CAA 90 bp | AATATATCCATACTTTGCAAACTTGGCAAGTGGCTGACCGCAGACTaGAATATTACTCTACCTCTAGAAATTTTGCTGTACACATTCACA | + |
Preference number: 6 (lower is better) Translates to: NISILCKLGKWLTAD*NITLPLEILLYTFT Trigger: TGTGAATGTGTACAGCAAAATTTCTAGAGGTAGAGTAATATTCAAGTCTGCGGTCAGCCACTTGCCAAGTTTGCAAAGTATGGATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655846.1 |
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CDS TCA 72 bp | ATGCAAGTGCAAAGATCCAAGATGATTGTGACATTCTaGATCATGATTTGCTTTGTTTCTGTATTCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: MQVQRSKMIVTF*IMICFVSVFLL Trigger: CAGCAAGAATACAGAAACAAAGCAAATCATGATTCAGAATGTCACAATCATCTTGGATCTTTGCACTTGCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655846.1 |