Pregenerated sensors for LINC02493 (Homo sapiens)
Ensembl gene IDs: ENSG00000250819Ensembl transcript IDs: ENST00000509964.1, ENST00000659226.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTGTGTGGTGCTTTTCAGTGGATGAACGACAAGTGGGGAGGAGTTaGTTGTCCACAGGAGAAGCAGTCCGGGCCATAAAGCCTAACCAG | + |
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Preference number: 5 (lower is better) Translates to: AVWCFSVDERQVGRS*LSTGEAVRAIKPNQ Trigger: CTGGTTAGGCTTTATGGCCCGGACTGCTTCTCCTGTGGACAATCAACTCCTCCCCACTTGTCGTTCATCCACTGAAAAGCACCACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS GCA 90 bp | CCAGCAGTCTTAGCCTCACCGAGATGGGGTGAAGGAAACTTAACTTaGTTGTATTGTGCTATACGTATTCAGAACCATTTCCTTACATGC | + |
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Preference number: 5 (lower is better) Translates to: PAVLASPRWGEGNLT*LYCAIRIQNHFLTC Trigger: GCATGTAAGGAAATGGTTCTGAATACGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAAGACTGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 90 bp | CAAATCACTATTCACAAACCAATCCCCACCAGCTTTGACAAATACTaGCATTCCTTAACAAACCAGAGGGAGCTGTGTGGTGCTTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QITIHKPIPTSFDKY*HSLTNQRELCGAFQ Trigger: CTGAAAAGCACCACACAGCTCCCTCTGGTTTGTTAAGGAATGTCAGTATTTGTCAAAGCTGGTGGGGATTGGTTTGTGAATAGTGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 90 bp | CAAGAATCCACAAATCACTATTCACAAACCAATCCCCACCAGCTTTaGCAAATACTGACATTCCTTAACAAACCAGAGGGAGCTGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: QESTNHYSQTNPHQL*QILTFLNKPEGAVW Trigger: CCACACAGCTCCCTCTGGTTTGTTAAGGAATGTCAGTATTTGTCAAAGCTGGTGGGGATTGGTTTGTGAATAGTGATTTGTGGATTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS GCA 90 bp | CTGACAAAACAATCTCATTTCTCAAGATCTTCAATCCTTGCTGGATaGAGTTTTGACCACATTGCCCTGTTCCTCGCTTTAACCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTKQSHFSRSSILAG*SFDHIALFLALTFR Trigger: CCTGAAGGTTAAAGCGAGGAACAGGGCAATGTGGTCAAAACTGCATCCAGCAAGGATTGAAGATCTTGAGAAATGAGATTGTTTTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659226.1 |
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| CDS TCA 90 bp | ACCAGTTGTAGATTTTCCAGCAGTCTTAGCCTCACCGAGATGGGGTaGAGGAAACTTAACTTGCTTGTATTGTGCTATACGTATTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TSCRFSSSLSLTEMG*RKLNLLVLCYTYSE Trigger: TTCTGAATACGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAAGACTGCTGGAAAATCTACAACTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CCA 90 bp | TTGCAACCAGTTGTAGATTTTCCAGCAGTCTTAGCCTCACCGAGATaGGGTGAAGGAAACTTAACTTGCTTGTATTGTGCTATACGTATT | + |
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Preference number: 5 (lower is better) Translates to: LQPVVDFPAVLASPR*GEGNLTCLYCAIRI Trigger: AATACGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAAGACTGCTGGAAAATCTACAACTGGTTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | CAAACCAGAGGGAGCTGTGTGGTGCTTTTCAGTGGATaGACGACAAGTGGGGAGGAGTTGATTGTCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: QTRGSCVVLFSG*TTSGEELIVHR Trigger: CCTGTGGACAATCAACTCCTCCCCACTTGTCGTTCATCCACTGAAAAGCACCACACAGCTCCCTCTGGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CCA 72 bp | GTCTGTCAGGGACACCAGAGGAACAAAATGGCCCAGTaGGACCATCACAGAATGAAACTCCCTGAAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VCQGHQRNKMAQ*DHHRMKLPERE Trigger: CTCCCTTTCAGGGAGTTTCATTCTGTGATGGTCCCACTGGGCCATTTTGTTCCTCTGGTGTCCCTGACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659226.1 |
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| CDS TCA 72 bp | TGCTTTTCAGTGGATGAACGACAAGTGGGGAGGAGTTaGTTGTCCACAGGAGAAGCAGTCCGGGCCATAAAG | + |
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Preference number: 6 (lower is better) Translates to: CFSVDERQVGRS*LSTGEAVRAIK Trigger: CTTTATGGCCCGGACTGCTTCTCCTGTGGACAATCAACTCCTCCCCACTTGTCGTTCATCCACTGAAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 72 bp | ATAACAGTGCCAGAAGAGTTAGTGTCTGATGAGGTCTaGAGTTGTAGATGGCTGCCTTCTCCCTGGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ITVPEELVSDEV*SCRWLPSPWAP Trigger: AGGGGCCCAGGGAGAAGGCAGCCATCTACAACTCAAGACCTCATCAGACACTAACTCTTCTGGCACTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS GCA 72 bp | CTGACATTCCTTAACAAACCAGAGGGAGCTGTGTGGTaGTTTTCAGTGGATGAACGACAAGTGGGGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LTFLNKPEGAVW*FSVDERQVGRS Trigger: ACTCCTCCCCACTTGTCGTTCATCCACTGAAAAGCACCACACAGCTCCCTCTGGTTTGTTAAGGAATGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | TGTTCAGTGGAGGAAAGCGAGCTCTTGTGTATACACTaGGTGTATCAAAGGCCACCTCTGAGGTTAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSVEESELLCIH*VYQRPPLRLVR Trigger: CCTGACTAACCTCAGAGGTGGCCTTTGATACACTCAGTGTATACACAAGAGCTCGCTTTCCTCCACTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CCA 72 bp | TTAACAAACCAGAGGGAGCTGTGTGGTGCTTTTCAGTaGATGAACGACAAGTGGGGAGGAGTTGATTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LTNQRELCGAFQ*MNDKWGGVDCP Trigger: TGGACAATCAACTCCTCCCCACTTGTCGTTCATCCACTGAAAAGCACCACACAGCTCCCTCTGGTTTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CCA 72 bp | ATACTGACATTCCTTAACAAACCAGAGGGAGCTGTGTaGTGCTTTTCAGTGGATGAACGACAAGTGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ILTFLNKPEGAV*CFSVDERQVGR Trigger: CCTCCCCACTTGTCGTTCATCCACTGAAAAGCACCACACAGCTCCCTCTGGTTTGTTAAGGAATGTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 90 bp | GAGGCTCATCTACAGAGCCTGAGTCCACTAGAATGTTTGACCTTGTaGAACCACAGTCTTCTCTCCTGTAATATGGTGATAGTTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: EAHLQSLSPLECLTL*NHSLLSCNMVIVPA Trigger: GGCAGGAACTATCACCATATTACAGGAGAGAAGACTGTGGTTCAACAAGGTCAAACATTCTAGTGGACTCAGGCTCTGTAGATGAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 90 bp | GCAGTCTTAGCCTCACCGAGATGGGGTGAAGGAAACTTAACTTGCTaGTATTGTGCTATACGTATTCAGAACCATTTCCTTACATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AVLASPRWGEGNLTC*YCAIRIQNHFLTCS Trigger: GCTGCATGTAAGGAAATGGTTCTGAATACGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAAGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 90 bp | TTGGAGGCTCATCTACAGAGCCTGAGTCCACTAGAATGTTTGACCTaGTTGAACCACAGTCTTCTCTCCTGTAATATGGTGATAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LEAHLQSLSPLECLT*LNHSLLSCNMVIVP Trigger: AGGAACTATCACCATATTACAGGAGAGAAGACTGTGGTTCAACAAGGTCAAACATTCTAGTGGACTCAGGCTCTGTAGATGAGCCTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | ATTCACAAACCAATCCCCACCAGCTTTGACAAATACTaGCATTCCTTAACAAACCAGAGGGAGCTGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: IHKPIPTSFDKY*HSLTNQRELCG Trigger: ACCACACAGCTCCCTCTGGTTTGTTAAGGAATGTCAGTATTTGTCAAAGCTGGTGGGGATTGGTTTGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | AGATTTTCCAGCAGTCTTAGCCTCACCGAGATGGGGTaGAGGAAACTTAACTTGCTTGTATTGTGCTATACG | + |
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Preference number: 6 (lower is better) Translates to: RFSSSLSLTEMG*RKLNLLVLCYT Trigger: CGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAAGACTGCTGGAAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | TTTCTCAAGATCTTCAATCCTTGCTGGATGCAGTTTTaGCCACATTGCCCTGTTCCTCGCTTTAACCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: FLKIFNPCWMQF*PHCPVPRFNLQ Trigger: CTGAAGGTTAAAGCGAGGAACAGGGCAATGTGGTCAAAACTGCATCCAGCAAGGATTGAAGATCTTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659226.1 |
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| CDS CCA 72 bp | GTTGTAGATTTTCCAGCAGTCTTAGCCTCACCGAGATaGGGTGAAGGAAACTTAACTTGCTTGTATTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VVDFPAVLASPR*GEGNLTCLYCA Trigger: AGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAAGACTGCTGGAAAATCTACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 72 bp | CATCTACAGAGCCTGAGTCCACTAGAATGTTTGACCTaGTTGAACCACAGTCTTCTCTCCTGTAATATGGTG | + |
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Preference number: 6 (lower is better) Translates to: HLQSLSPLECLT*LNHSLLSCNMV Trigger: CACCATATTACAGGAGAGAAGACTGTGGTTCAACAAGGTCAAACATTCTAGTGGACTCAGGCTCTGTAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 90 bp | CCTCTGAGGTTAGTCAGGAACCTGTCTTCTTCGCAGATGTCAATATaGCCAGAGAGTTTCCAAGAATCCACAAATCACTATTCACAAACC | + |
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Preference number: 6 (lower is better) Translates to: PLRLVRNLSSSQMSI*PESFQESTNHYSQT Trigger: GGTTTGTGAATAGTGATTTGTGGATTCTTGGAAACTCTCTGGCAATATTGACATCTGCGAAGAAGACAGGTTCCTGACTAACCTCAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 72 bp | GCCTCACCGAGATGGGGTGAAGGAAACTTAACTTGCTaGTATTGTGCTATACGTATTCAGAACCATTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ASPRWGEGNLTC*YCAIRIQNHFL Trigger: AAGGAAATGGTTCTGAATACGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 72 bp | CTACAGAGCCTGAGTCCACTAGAATGTTTGACCTTGTaGAACCACAGTCTTCTCTCCTGTAATATGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: LQSLSPLECLTL*NHSLLSCNMVI Trigger: TATCACCATATTACAGGAGAGAAGACTGTGGTTCAACAAGGTCAAACATTCTAGTGGACTCAGGCTCTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS GCA 72 bp | TTAGCCTCACCGAGATGGGGTGAAGGAAACTTAACTTaGTTGTATTGTGCTATACGTATTCAGAACCATTTC | + |
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Preference number: 6 (lower is better) Translates to: LASPRWGEGNLT*LYCAIRIQNHF Trigger: GAAATGGTTCTGAATACGTATAGCACAATACAAGCAAGTTAAGTTTCCTTCACCCCATCTCGGTGAGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | ACAAATCACTATTCACAAACCAATCCCCACCAGCTTTaGCAAATACTGACATTCCTTAACAAACCAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: TNHYSQTNPHQL*QILTFLNKPEG Trigger: TCCCTCTGGTTTGTTAAGGAATGTCAGTATTTGTCAAAGCTGGTGGGGATTGGTTTGTGAATAGTGATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS TCA 72 bp | GAAAAATTCATTGTAAGCCCCTTTAAACCATCACACTaGAATGTTCAGTGGAGGAAAGCGAGCTCTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: EKFIVSPFKPSH*NVQWRKASSCV Trigger: TACACAAGAGCTCGCTTTCCTCCACTGAACATTTCAGTGTGATGGTTTAAAGGGGCTTACAATGAATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CAA 72 bp | TTAGTCAGGAACCTGTCTTCTTCGCAGATGTCAATATaGCCAGAGAGTTTCCAAGAATCCACAAATCACTAT | + |
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Preference number: 6 (lower is better) Translates to: LVRNLSSSQMSI*PESFQESTNHY Trigger: ATAGTGATTTGTGGATTCTTGGAAACTCTCTGGCAATATTGACATCTGCGAAGAAGACAGGTTCCTGACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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| CDS CCA 72 bp | TTAATGGCTATGCATAGAATTATTCTGGATACTTCATaGAGCATAGCAAGTGAAGTTTTATGTCTTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LMAMHRIILDTS*SIASEVLCLPK Trigger: CTTGGGAAGACATAAAACTTCACTTGCTATGCTCCATGAAGTATCCAGAATAATTCTATGCATAGCCATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509964.1 ENST00000659226.1 |
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