Pregenerated sensors for LINC02461 (Homo sapiens)
Ensembl gene IDs: ENSG00000258331Ensembl transcript IDs: ENST00000553211.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAAGTCTACGTTGACATCTCTTTGCTCCAGGTTGTGTGCACGTTCTaGAAGCTTAACAGGAACCATGACTGGGAGGCCTCTGGAAACTTA | + |
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Preference number: 5 (lower is better) Translates to: QVYVDISLLQVVCTF*KLNRNHDWEASGNL Trigger: TAAGTTTCCAGAGGCCTCCCAGTCATGGTTCCTGTTAAGCTTGCAGAACGTGCACACAACCTGGAGCAAAGAGATGTCAACGTAGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS CCA 90 bp | GAGAAGCAAGCACATCTTACTAATGTCTGGTCTATAGATGAGTGGTaGTCCATGAATCATTTGTTGCCAACCTCATACCATATGAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: EKQAHLTNVWSIDEW*SMNHLLPTSYHMKG Trigger: ACCTTTCATATGGTATGAGGTTGGCAACAAATGATTCATGGACCACCACTCATCTATAGACCAGACATTAGTAAGATGTGCTTGCTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS GCA 72 bp | GTTGACATCTCTTTGCTCCAGGTTGTGTGCACGTTCTaGAAGCTTAACAGGAACCATGACTGGGAGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VDISLLQVVCTF*KLNRNHDWEAS Trigger: AGAGGCCTCCCAGTCATGGTTCCTGTTAAGCTTGCAGAACGTGCACACAACCTGGAGCAAAGAGATGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS GCA 72 bp | CAAGTCTACGTTGACATCTCTTTGCTCCAGGTTGTGTaGACGTTCTGCAAGCTTAACAGGAACCATGACTGG | + |
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Preference number: 6 (lower is better) Translates to: QVYVDISLLQVV*TFCKLNRNHDW Trigger: CCAGTCATGGTTCCTGTTAAGCTTGCAGAACGTGCACACAACCTGGAGCAAAGAGATGTCAACGTAGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS TCA 72 bp | CATGACTGGGAGGCCTCTGGAAACTTACAGTCATGGTaGAAGGCGAAGGAGAAGCAAGCACATCTTACTAAT | + |
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Preference number: 6 (lower is better) Translates to: HDWEASGNLQSW*KAKEKQAHLTN Trigger: ATTAGTAAGATGTGCTTGCTTCTCCTTCGCCTTTCACCATGACTGTAAGTTTCCAGAGGCCTCCCAGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS GCA 72 bp | TTTGTTGAGGCTTTCAAGTCTACGTTGACATCTCTTTaGTCCAGGTTGTGTGCACGTTCTGCAAGCTTAACA | + |
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Preference number: 6 (lower is better) Translates to: FVEAFKSTLTSL*SRLCARSASLT Trigger: TGTTAAGCTTGCAGAACGTGCACACAACCTGGAGCAAAGAGATGTCAACGTAGACTTGAAAGCCTCAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS TCA 72 bp | TCTATTTTGCTGCTTCAAAGGAGATCATCTGACATTTaGAGTCTCAATAGCCACTTTGTGACAGGAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SILLLQRRSSDI*SLNSHFVTGEL Trigger: CAGCTCTCCTGTCACAAAGTGGCTATTGAGACTTCAAATGTCAGATGATCTCCTTTGAAGCAGCAAAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS GCA 72 bp | GACATCCATCCTGGAGTTCTATCCACTCTATTTTGCTaGTTCAAAGGAGATCATCTGACATTTGAAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: DIHPGVLSTLFC*FKGDHLTFEVS Trigger: TGAGACTTCAAATGTCAGATGATCTCCTTTGAAGCAGCAAAATAGAGTGGATAGAACTCCAGGATGGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS CAA 72 bp | TGGTCTATAGATGAGTGGTGGTCCATGAATCATTTGTaGCCAACCTCATACCATATGAAAGGTAAATTTGAG | + |
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Preference number: 6 (lower is better) Translates to: WSIDEWWSMNHL*PTSYHMKGKFE Trigger: CTCAAATTTACCTTTCATATGGTATGAGGTTGGCAACAAATGATTCATGGACCACCACTCATCTATAGACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS CAA 72 bp | GTCTGGTCTATAGATGAGTGGTGGTCCATGAATCATTaGTTGCCAACCTCATACCATATGAAAGGTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: VWSIDEWWSMNH*LPTSYHMKGKF Trigger: AAATTTACCTTTCATATGGTATGAGGTTGGCAACAAATGATTCATGGACCACCACTCATCTATAGACCAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS TCA 72 bp | TATCTATTCTGGAACATTGAGGACCTGCAGCTGCTTTaGGGATTTACTCTAAAGCATTCTAAATCTTTAACC | + |
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Preference number: 6 (lower is better) Translates to: YLFWNIEDLQLL*GFTLKHSKSLT Trigger: GGTTAAAGATTTAGAATGCTTTAGAGTAAATCCTCAAAGCAGCTGCAGGTCCTCAATGTTCCAGAATAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS CAA 90 bp | CTTACTAATGTCTGGTCTATAGATGAGTGGTGGTCCATGAATCATTaGTTGCCAACCTCATACCATATGAAAGGTAAATTTGAGTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LTNVWSIDEWWSMNH*LPTSYHMKGKFELE Trigger: TTCTAACTCAAATTTACCTTTCATATGGTATGAGGTTGGCAACAAATGATTCATGGACCACCACTCATCTATAGACCAGACATTAGTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS TCA 72 bp | ACTCTAAAGCATTCTAAATCTTTAACCGGTTATTACTaGGGTCAGAGGGAGAAAGAACATTATTTTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: TLKHSKSLTGYY*GQREKEHYFDV Trigger: GACATCAAAATAATGTTCTTTCTCCCTCTGACCTCAGTAATAACCGGTTAAAGATTTAGAATGCTTTAGAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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| CDS TCA 72 bp | AATTATCCTCTGAATTTTGAATGTATAGATGTTTGTTaGGGCTTTCAAGTCTACGTTGACATCTCTTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: NYPLNFECIDVC*GFQVYVDISLL Trigger: GAGCAAAGAGATGTCAACGTAGACTTGAAAGCCTCAACAAACATCTATACATTCAAAATTCAGAGGATAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553211.1 |
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