Pregenerated sensors for LINC02449 (Homo sapiens)

Ensembl gene IDs: ENSG00000215241

Ensembl transcript IDs: ENST00000304751.9, ENST00000666548.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CAGCCCAGATACCCTTCCTGCACAGAAAAAGTGAAAACGTGGGTGTaGGTTCAAATCCTGACTCACCCATTCTGCAGTCTTAGACATGAG	+
Preference number: 5 (lower is better) Translates to: QPRYPSCTEKVKTWV*VQILTHPFCSLRHE Trigger: CTCATGTCTAAGACTGCAGAATGGGTGAGTCAGGATTTGAACCCACACCCACGTTTTCACTTTTTCTGTGCAGGAAGGGTATCTGGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666548.1
CDS TCA 90 bp	GTGAAGCATCCTTTGGAACTAGTTCCTCTGGTGAATTCTCTTCATTaGTCCTGCTGGAATGAGCTCTTTCCTGACTGCTATAGGATGGAT	+
Preference number: 5 (lower is better) Translates to: VKHPLELVPLVNSLH*SCWNELFPDCYRMD Trigger: ATCCATCCTATAGCAGTCAGGAAAGAGCTCATTCCAGCAGGATCAATGAAGAGAATTCACCAGAGGAACTAGTTCCAAAGGATGCTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666548.1
CDS TCA 90 bp	GCCGGTATTACACCATTCCATCCCAAATCTCCCCTCCAAACTTGGTaGAAATCATCTGGCCATTTTTACAGATTAGTACGAAAGCAAACA	+
Preference number: 5 (lower is better) Translates to: AGITPFHPKSPLQTW*KSSGHFYRLVRKQT Trigger: TGTTTGCTTTCGTACTAATCTGTAAAAATGGCCAGATGATTTTCACCAAGTTTGGAGGGGAGATTTGGGATGGAATGGTGTAATACCGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666548.1
CDS GCA 72 bp	AGGCCCGTGAAAGCTGTTGGTATGTCAACAGTTAGCTaGTTCTCATTGCTGAGTGGCGATTGGTCCTGTCAT	+
Preference number: 6 (lower is better) Translates to: RPVKAVGMSTVS*FSLLSGDWSCH Trigger: ATGACAGGACCAATCGCCACTCAGCAATGAGAAGCAGCTAACTGTTGACATACCAACAGCTTTCACGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304751.9
CDS TCA 72 bp	GGAACTATTCGACACACACCACCACGCCCAACGAAGTaGATATTTTATATACCAGCTGGCCGGTATTACACC	+
Preference number: 6 (lower is better) Translates to: GTIRHTPPRPTK*IFYIPAGRYYT Trigger: GGTGTAATACCGGCCAGCTGGTATATAAAATATTCACTTCGTTGGGCGTGGTGGTGTGTGTCGAATAGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666548.1
CDS TCA 72 bp	CCTTTGGAACTAGTTCCTCTGGTGAATTCTCTTCATTaGTCCTGCTGGAATGAGCTCTTTCCTGACTGCTAT	+
Preference number: 6 (lower is better) Translates to: PLELVPLVNSLH*SCWNELFPDCY Trigger: ATAGCAGTCAGGAAAGAGCTCATTCCAGCAGGATCAATGAAGAGAATTCACCAGAGGAACTAGTTCCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666548.1
CDS TCA 72 bp	ACACCATTCCATCCCAAATCTCCCCTCCAAACTTGGTaGAAATCATCTGGCCATTTTTACAGATTAGTACGA	+
Preference number: 6 (lower is better) Translates to: TPFHPKSPLQTW*KSSGHFYRLVR Trigger: TCGTACTAATCTGTAAAAATGGCCAGATGATTTTCACCAAGTTTGGAGGGGAGATTTGGGATGGAATGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666548.1

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