Pregenerated sensors for LINC02427 (Homo sapiens)
Ensembl gene IDs: ENSG00000271538Ensembl transcript IDs: ENST00000604660.1, ENST00000605270.6
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAGGCCTGCGAGGTGGGATGTGCACACGGCTGATGCTGGACACCTaGAGCCAGGGCGTGACGGGGGCACTGGCTGACTGCCCAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RGLRGGMCTRLMLDT*SQGVTGALADCPGP Trigger: GGGCCCTGGGCAGTCAGCCAGTGCCCCCGTCACGCCCTGGCTCCAGGTGTCCAGCATCAGCCGTGTGCACATCCCACCTCGCAGGCCTCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 90 bp | GTAGCATGCAGAAAGTGGGCCAGCAGCCGGGAGAGGCCTGCGAGGTaGGATGTGCACACGGCTGATGCTGGACACCTGGAGCCAGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: VACRKWASSRERPAR*DVHTADAGHLEPGR Trigger: ACGCCCTGGCTCCAGGTGTCCAGCATCAGCCGTGTGCACATCCCACCTCGCAGGCCTCTCCCGGCTGCTGGCCCACTTTCTGCATGCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 90 bp | CCACCACGCCTGCCCACACTTTTCTGTGTGGGTCCTCACCCAGCCTaGCCACGCTCCAGTGGCATCCGCAGCTCTGCTCTTTTCCTCACC | + |
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Preference number: 5 (lower is better) Translates to: PPRLPTLFCVGPHPA*PRSSGIRSSALFLT Trigger: GGTGAGGAAAAGAGCAGAGCTGCGGATGCCACTGGAGCGTGGCCAGGCTGGGTGAGGACCCACACAGAAAAGTGTGGGCAGGCGTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 90 bp | GTTAGGCCAGGTGAGAGGCCACTCACCCTGGCCAGCAAGTATGGGTaGGGCAGGACATGCCAGGCCCCTGGCAATCCAGAAGTCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VRPGERPLTLASKYG*GRTCQAPGNPEVPL Trigger: CAAGGGGACTTCTGGATTGCCAGGGGCCTGGCATGTCCTGCCTCACCCATACTTGCTGGCCAGGGTGAGTGGCCTCTCACCTGGCCTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 90 bp | ACAAAGAGGGCAGCAAGGTTAGGCCAGGTGAGAGGCCACTCACCCTaGCCAGCAAGTATGGGTGAGGCAGGACATGCCAGGCCCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: TKRAARLGQVRGHSP*PASMGEAGHARPLA Trigger: TGCCAGGGGCCTGGCATGTCCTGCCTCACCCATACTTGCTGGCCAGGGTGAGTGGCCTCTCACCTGGCCTAACCTTGCTGCCCTCTTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 90 bp | AGGGCCAGGCGCTGTGGTGGCTCACACACAATGCCAGGCAGCCACTaGCTCAATGTATTGGTACAGGGCAGCAGCTGTGCCTGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RARRCGGSHTMPGSH*LNVLVQGSSCACSS Trigger: GGAACTGCAGGCACAGCTGCTGCCCTGTACCAATACATTGAGCCAGTGGCTGCCTGGCATTGTGTGTGAGCCACCACAGCGCCTGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | GTCAAAGTCTGTGTAGGGCCAGGCGCTGTGGTGGCTCACACACAATaGCAGGCAGCCACTGGCTCAATGTATTGGTACAGGGCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VKVCVGPGAVVAHTQ*QAATGSMYWYRAAA Trigger: AGCTGCTGCCCTGTACCAATACATTGAGCCAGTGGCTGCCTGGCATTGTGTGTGAGCCACCACAGCGCCTGGCCCTACACAGACTTTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | CAGCCCTGGGTTCCACTTCATCTCCTTGAGACTCCAGCTTTTGCTTaGTCTCTCCATGTCCACCTTCCCTTCCTGACTGCCAGCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QPWVPLHLLETPAFA*SLHVHLPFLTASGS Trigger: GCTGCCGCTGGCAGTCAGGAAGGGAAGGTGGACATGGAGAGAGCAAGCAAAAGCTGGAGTCTCAAGGAGATGAAGTGGAACCCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | GGCAGCCACTGGCTCAATGTATTGGTACAGGGCAGCAGCTGTGCCTaGAGTTCCTCCAGCTCCCACCAGAACTGCTTCTTCAGCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: GSHWLNVLVQGSSCA*SSSSSHQNCFFSFT Trigger: AGTGAAGCTGAAGAAGCAGTTCTGGTGGGAGCTGGAGGAACTGCAGGCACAGCTGCTGCCCTGTACCAATACATTGAGCCAGTGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 90 bp | GGTGAGGCAGGACATGCCAGGCCCCTGGCAATCCAGAAGTCCCCTTaGAAGAGATGGAAGACGCAATTCCATCCAGCAAGAACCAACCCT | + |
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Preference number: 5 (lower is better) Translates to: GEAGHARPLAIQKSP*KRWKTQFHPARTNP Trigger: AGGGTTGGTTCTTGCTGGATGGAATTGCGTCTTCCATCTCTTCCAAGGGGACTTCTGGATTGCCAGGGGCCTGGCATGTCCTGCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | ATCAGTTTCAGTCCATCCACAGGAGTTCCATCTCCTCCCTGCAGGTaGAGCTCACGCCTACTCTCTCCCACTGCACATCCATTTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ISFSPSTGVPSPPCR*SSRLLSPTAHPFAS Trigger: GCTGGCAAATGGATGTGCAGTGGGAGAGAGTAGGCGTGAGCTGCACCTGCAGGGAGGAGATGGAACTCCTGTGGATGGACTGAAACTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS GCA 90 bp | GGTAAGAGCACTACAGGAAGAGAGAGAAGCATCTGCTTCCTCGAGTaGCAGGGTGGCAGAGAGGCCACCGGAAGTCTTCACTTGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GKSTTGRERSICFLE*QGGREATGSLHLAE Trigger: TTCAGCCAAGTGAAGACTTCCGGTGGCCTCTCTGCCACCCTGGCACTCGAGGAAGCAGATGCTTCTCTCTCTTCCTGTAGTGCTCTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 90 bp | GGCAGAGAGGCCACCGGAAGTCTTCACTTGGCTGAAGACTTGCAGTaGGTCTGGGGTTTAATTCAGAGGATTGAGAGAAGGCCAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: GREATGSLHLAEDLQ*VWGLIQRIERRPAP Trigger: TGGTGCTGGCCTTCTCTCAATCCTCTGAATTAAACCCCAGACTCACTGCAAGTCTTCAGCCAAGTGAAGACTTCCGGTGGCCTCTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | GAAGACATCAGTTTCAGTCCATCCACAGGAGTTCCATCTCCTCCCTaGAGGTGCAGCTCACGCCTACTCTCTCCCACTGCACATCCATTT | + |
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Preference number: 5 (lower is better) Translates to: EDISFSPSTGVPSPP*RCSSRLLSPTAHPF Trigger: AAATGGATGTGCAGTGGGAGAGAGTAGGCGTGAGCTGCACCTGCAGGGAGGAGATGGAACTCCTGTGGATGGACTGAAACTGATGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS GCA 90 bp | CAGCCACCTGCAAGCCAAGGAGAGAGGATTCAGAGAAACCAAGCCTaGCAATATCTTGGTCCTGAACACCCTGCCTGCAGAACTGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QPPASQGERIQRNQA*QYLGPEHPACRTVR Trigger: TCTCACAGTTCTGCAGGCAGGGTGTTCAGGACCAAGATATTGGCAGGCTTGGTTTCTCTGAATCCTCTCTCCTTGGCTTGCAGGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | CTGCCAGCGGCAGCCGGCAGATCATATTTCCATGCGGCAGCTCAATaGACTCAGCCAATGCATAAAGGAAGCCAGTGGAAGGTTATCAAT | + |
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Preference number: 5 (lower is better) Translates to: LPAAAGRSYFHAAAQ*TQPMHKGSQWKVIN Trigger: ATTGATAACCTTCCACTGGCTTCCTTTATGCATTGGCTGAGTGCATTGAGCTGCCGCATGGAAATATGATCTGCCGGCTGCCGCTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 90 bp | TCCTCCAGCTCCCACCAGAACTGCTTCTTCAGCTTCACTGAATCTTaGGTTTATGAGCAATTCCATGGTGAAGGGCACCAGCTCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SSSSHQNCFFSFTES*VYEQFHGEGHQLLC Trigger: GCAGAGGAGCTGGTGCCCTTCACCATGGAATTGCTCATAAACCCAAGATTCAGTGAAGCTGAAGAAGCAGTTCTGGTGGGAGCTGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | CAATCTGCACCGTGCCTTGCAGGAGAGGAAGCTGCTGTTCCTGTTTaGATGTGCCAGGCCAGTTACTGTAGAGATGTACGCTTCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: QSAPCLAGEEAAVPV*MCQASYCRDVRFIK Trigger: TTTAATGAAGCGTACATCTCTACAGTAACTGGCCTGGCACATGCAAACAGGAACAGCAGCTTCCTCTCCTGCAAGGCACGGTGCAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 90 bp | TGGGAATTGTTCAGCATGGGGGTCCAGGGCCAACAGAGAGAATTCTaGTTGTATTCAAGAAGAAAGGCGAAACTCGGAGCTAGGATAGCT | + |
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Preference number: 5 (lower is better) Translates to: WELFSMGVQGQQREF*LYSRRKAKLGARIA Trigger: AGCTATCCTAGCTCCGAGTTTCGCCTTTCTTCTTGAATACAATCAGAATTCTCTCTGTTGGCCCTGGACCCCCATGCTGAACAATTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | GCCCTGCTGACTTCAGGCCCACTTCTGGACACAGGGGCAGCAGGTTaGAGCTTTCATAACAATGTGTATCCTAATCTCTTTAATAAATTC | + |
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Preference number: 5 (lower is better) Translates to: ALLTSGPLLDTGAAG*SFHNNVYPNLFNKF Trigger: GAATTTATTAAAGAGATTAGGATACACATTGTTATGAAAGCTGCAACCTGCTGCCCCTGTGTCCAGAAGTGGGCCTGAAGTCAGCAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS GCA 90 bp | AGCTCCCGTCCATGGTGTTTTGTTACGGCAGCCCTAGCAAACTCATaGAGAAAACCTCTTACTATCTGCATGATCTGTTTAGGATGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSRPWCFVTAALANS*RKPLTICMICLGCA Trigger: AGCACATCCTAAACAGATCATGCAGATAGTAAGAGGTTTTCTGCATGAGTTTGCTAGGGCTGCCGTAACAAAACACCATGGACGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 90 bp | GTTACGGCAGCCCTAGCAAACTCATGCAGAAAACCTCTTACTATCTaGATGATCTGTTTAGGATGTGCTGAAATAGTATTATTCACCATT | + |
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Preference number: 5 (lower is better) Translates to: VTAALANSCRKPLTI*MICLGCAEIVLFTI Trigger: AATGGTGAATAATACTATTTCAGCACATCCTAAACAGATCATGCAGATAGTAAGAGGTTTTCTGCATGAGTTTGCTAGGGCTGCCGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 90 bp | GCAAATTTCCAAGAAGAAAATATAGCATGTGGCATGTCTCAAACTTaGTTGTTCTATAGAAAATGTTATGAGCTCAACTGTGTCTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: ANFQEENIACGMSQT*LFYRKCYELNCVSL Trigger: TAGGGAGACACAGTTGAGCTCATAACATTTTCTATAGAACAATCAAGTTTGAGACATGCCACATGCTATATTTTCTTCTTGGAAATTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | GGACACCTGGAGCCAGGGCGTGACGGGGGCACTGGCTaGCTGCCCAGGGCCCATGCCTTATCCCCCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: GHLEPGRDGGTG*LPRAHALSPAP Trigger: GGGGGCGGGGGATAAGGCATGGGCCCTGGGCAGTCAGCCAGTGCCCCCGTCACGCCCTGGCTCCAGGTGTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | CGAGGTGGGATGTGCACACGGCTGATGCTGGACACCTaGAGCCAGGGCGTGACGGGGGCACTGGCTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: RGGMCTRLMLDT*SQGVTGALADC Trigger: GCAGTCAGCCAGTGCCCCCGTCACGCCCTGGCTCCAGGTGTCCAGCATCAGCCGTGTGCACATCCCACCTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | GGTGAGAGGCCACTCACCCTGGCCAGCAAGTATGGGTaGGGCAGGACATGCCAGGCCCCTGGCAATCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GERPLTLASKYG*GRTCQAPGNPE Trigger: TTCTGGATTGCCAGGGGCCTGGCATGTCCTGCCTCACCCATACTTGCTGGCCAGGGTGAGTGGCCTCTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | GCAGCAAGGTTAGGCCAGGTGAGAGGCCACTCACCCTaGCCAGCAAGTATGGGTGAGGCAGGACATGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AARLGQVRGHSP*PASMGEAGHAR Trigger: CCTGGCATGTCCTGCCTCACCCATACTTGCTGGCCAGGGTGAGTGGCCTCTCACCTGGCCTAACCTTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 90 bp | CCTGCAGGTGCAGCTCACGCCTACTCTCTCCCACTGCACATCCATTaGCCAGCCCTGCTGACTTCAGGCCCACTTCTGGACACAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PAGAAHAYSLPLHIH*PALLTSGPLLDTGA Trigger: TGCCCCTGTGTCCAGAAGTGGGCCTGAAGTCAGCAGGGCTGGCAAATGGATGTGCAGTGGGAGAGAGTAGGCGTGAGCTGCACCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS TCA 72 bp | ACTCTCTCCCACTGCACATCCATTTGCCAGCCCTGCTaGCTTCAGGCCCACTTCTGGACACAGGGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TLSHCTSICQPC*LQAHFWTQGQQ Trigger: CTGCTGCCCCTGTGTCCAGAAGTGGGCCTGAAGTCAGCAGGGCTGGCAAATGGATGTGCAGTGGGAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS TCA 72 bp | CAGAGCACAGAGACCCACAGGCCTGGTGACACCTACTaGAGCTCCTGCCCCAAGCTGTGTCCACCAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: QSTETHRPGDTY*SSCPKLCPPVT Trigger: AGTCACTGGTGGACACAGCTTGGGGCAGGAGCTTCAGTAGGTGTCACCAGGCCTGTGGGTCTCTGTGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604660.1 |
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| CDS CCA 72 bp | CGCTGTGGTGGCTCACACACAATGCCAGGCAGCCACTaGCTCAATGTATTGGTACAGGGCAGCAGCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RCGGSHTMPGSH*LNVLVQGSSCA Trigger: GGCACAGCTGCTGCCCTGTACCAATACATTGAGCCAGTGGCTGCCTGGCATTGTGTGTGAGCCACCACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | ATGTGGGTCCCAGGCAGTGCTCTGACATGCCCTAGCTaGGCAGAGCTGCTCTCTGGGAGCCAGTTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: MWVPGSALTCPS*AELLSGSQFSA Trigger: AGCAGAAAACTGGCTCCCAGAGAGCAGCTCTGCTCAGCTAGGGCATGTCAGAGCACTGCCTGGGACCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | TGTGTAGGGCCAGGCGCTGTGGTGGCTCACACACAATaGCAGGCAGCCACTGGCTCAATGTATTGGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: CVGPGAVVAHTQ*QAATGSMYWYR Trigger: CCTGTACCAATACATTGAGCCAGTGGCTGCCTGGCATTGTGTGTGAGCCACCACAGCGCCTGGCCCTACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | CACCAGGCTGCAGAGATACCAGGGTTACAGCACAGCTaGGATGAGGAGCTGACTGATCCTGTTGGGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: HQAAEIPGLQHS*DEELTDPVGRT Trigger: GGTCCTCCCAACAGGATCAGTCAGCTCCTCATCTCAGCTGTGCTGTAACCCTGGTATCTCTGCAGCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | CACACACAATGCCAGGCAGCCACTGGCTCAATGTATTaGTACAGGGCAGCAGCTGTGCCTGCAGTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HTQCQAATGSMY*YRAAAVPAVPP Trigger: TGGAGGAACTGCAGGCACAGCTGCTGCCCTGTACCAATACATTGAGCCAGTGGCTGCCTGGCATTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | TGGCTCAATGTATTGGTACAGGGCAGCAGCTGTGCCTaGAGTTCCTCCAGCTCCCACCAGAACTGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WLNVLVQGSSCA*SSSSSHQNCFF Trigger: GAAGAAGCAGTTCTGGTGGGAGCTGGAGGAACTGCAGGCACAGCTGCTGCCCTGTACCAATACATTGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | GGTGCGAGGAGCAGAAATAATGCGTGGAAAGCAATCTaGACCGTGCCTTGCAGGAGAGGAAGCTGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GARSRNNAWKAI*TVPCRRGSCCS Trigger: GGAACAGCAGCTTCCTCTCCTGCAAGGCACGGTGCAGATTGCTTTCCACGCATTATTTCTGCTCCTCGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | GGACATGCCAGGCCCCTGGCAATCCAGAAGTCCCCTTaGAAGAGATGGAAGACGCAATTCCATCCAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GHARPLAIQKSP*KRWKTQFHPAR Trigger: TCTTGCTGGATGGAATTGCGTCTTCCATCTCTTCCAAGGGGACTTCTGGATTGCCAGGGGCCTGGCATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 72 bp | AGGACATGCCAGGCCCCTGGCAATCCAGAAGTCCCCTaGGAAGAGATGGAAGACGCAATTCCATCCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RTCQAPGNPEVP*EEMEDAIPSSK Trigger: CTTGCTGGATGGAATTGCGTCTTCCATCTCTTCCAAGGGGACTTCTGGATTGCCAGGGGCCTGGCATGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | CTCTGCAGGTCATCTTCATCATCAGCGCTGGAGTGTTaGAGGCCTGAGAGGCTGACGTGGAAGACATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LCRSSSSSALEC*RPERLTWKTSV Trigger: AACTGATGTCTTCCACGTCAGCCTCTCAGGCCTCCAACACTCCAGCGCTGATGATGAAGATGACCTGCAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS TCA 72 bp | GTCATCTTCATCATCAGCGCTGGAGTGTTGGAGGCCTaGGAGGCTGACGTGGAAGACATCAGTTTCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VIFIISAGVLEA*EADVEDISFSP Trigger: TGGACTGAAACTGATGTCTTCCACGTCAGCCTCTCAGGCCTCCAACACTCCAGCGCTGATGATGAAGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS GCA 72 bp | GCAAGCCAAGGAGAGAGGATTCAGAGAAACCAAGCCTaGCAATATCTTGGTCCTGAACACCCTGCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ASQGERIQRNQA*QYLGPEHPACR Trigger: TCTGCAGGCAGGGTGTTCAGGACCAAGATATTGGCAGGCTTGGTTTCTCTGAATCCTCTCTCCTTGGCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | GCAGCCGGCAGATCATATTTCCATGCGGCAGCTCAATaGACTCAGCCAATGCATAAAGGAAGCCAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AAGRSYFHAAAQ*TQPMHKGSQWK Trigger: CTTCCACTGGCTTCCTTTATGCATTGGCTGAGTGCATTGAGCTGCCGCATGGAAATATGATCTGCCGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | GTTCCACTTCATCTCCTTGAGACTCCAGCTTTTGCTTaGTCTCTCCATGTCCACCTTCCCTTCCTGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: VPLHLLETPAFA*SLHVHLPFLTA Trigger: GGCAGTCAGGAAGGGAAGGTGGACATGGAGAGAGCAAGCAAAAGCTGGAGTCTCAAGGAGATGAAGTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | GGTTTAATTCAGAGGATTGAGAGAAGGCCAGCACCATaGGAATTGTTCAGCATGGGGGTCCAGGGCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: GLIQRIERRPAP*ELFSMGVQGQQ Trigger: CTGTTGGCCCTGGACCCCCATGCTGAACAATTCCCATGGTGCTGGCCTTCTCTCAATCCTCTGAATTAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 72 bp | GGAAGACGCAATTCCATCCAGCAAGAACCAACCCTCTaGCCCACTTACCAATCCCATTCTCTCCACGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: GRRNSIQQEPTL*PTYQSHSLHVA Trigger: GGCTACGTGGAGAGAATGGGATTGGTAAGTGGGCAAGAGGGTTGGTTCTTGCTGGATGGAATTGCGTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 72 bp | ATTCAGAGGATTGAGAGAAGGCCAGCACCATGGGAATaGTTCAGCATGGGGGTCCAGGGCCAACAGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: IQRIERRPAPWE*FSMGVQGQQRE Trigger: TTCTCTCTGTTGGCCCTGGACCCCCATGCTGAACAATTCCCATGGTGCTGGCCTTCTCTCAATCCTCTGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 90 bp | GGAAGAGATGGAAGACGCAATTCCATCCAGCAAGAACCAACCCTCTaGCCCACTTACCAATCCCATTCTCTCCACGTAGCCCTCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GRDGRRNSIQQEPTL*PTYQSHSLHVALQS Trigger: GCTTTGGAGGGCTACGTGGAGAGAATGGGATTGGTAAGTGGGCAAGAGGGTTGGTTCTTGCTGGATGGAATTGCGTCTTCCATCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 90 bp | ACATGCGCTCTAATGAGATACAGCCCTGGGTTCCACTTCATCTCCTaGAGACTCCAGCTTTTGCTTGCTCTCTCCATGTCCACCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TCALMRYSPGFHFIS*RLQLLLALSMSTFP Trigger: AGGGAAGGTGGACATGGAGAGAGCAAGCAAAAGCTGGAGTCTCAAGGAGATGAAGTGGAACCCAGGGCTGTATCTCATTAGAGCGCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | AGATACCAGGGTTACAGCACAGCTGAGATGAGGAGCTaGCTGATCCTGTTGGGAGGACCTGGAGATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: RYQGYSTAEMRS*LILLGGPGDDS Trigger: TGAATCATCTCCAGGTCCTCCCAACAGGATCAGTCAGCTCCTCATCTCAGCTGTGCTGTAACCCTGGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | AGCTGTGCCTGCAGTTCCTCCAGCTCCCACCAGAACTaGTTCTTCAGCTTCACTGAATCTTGGGTTTATGAG | + |
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Preference number: 6 (lower is better) Translates to: SCACSSSSSHQN*FFSFTESWVYE Trigger: CTCATAAACCCAAGATTCAGTGAAGCTGAAGAAGCAGTTCTGGTGGGAGCTGGAGGAACTGCAGGCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | AGGGGGTCAGGAAAGTGGGCCCTAATCCAGTTTGACTaGTGTCCTTATAAGAAGAGGAGGCTAGGACACAGA | + |
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Preference number: 6 (lower is better) Translates to: RGSGKWALIQFD*CPYKKRRLGHR Trigger: TCTGTGTCCTAGCCTCCTCTTCTTATAAGGACACCAGTCAAACTGGATTAGGGCCCACTTTCCTGACCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | GCCACCGGAAGTCTTCACTTGGCTGAAGACTTGCAGTaGGTCTGGGGTTTAATTCAGAGGATTGAGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ATGSLHLAEDLQ*VWGLIQRIERR Trigger: CCTTCTCTCAATCCTCTGAATTAAACCCCAGACTCACTGCAAGTCTTCAGCCAAGTGAAGACTTCCGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 72 bp | TTTGGGGCCAGGCAGCGAATAGAAGGTAGAGGGGCCTaGAGAAGTCTGTCAGTGAGGCCTTCAATAAATATG | + |
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Preference number: 6 (lower is better) Translates to: FGARQRIEGRGA*RSLSVRPSINM Trigger: CATATTTATTGAAGGCCTCACTGACAGACTTCTCAAGGCCCCTCTACCTTCTATTCGCTGCCTGGCCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000604660.1 ENST00000605270.6 |
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| CDS CAA 72 bp | CTAATGAGATACAGCCCTGGGTTCCACTTCATCTCCTaGAGACTCCAGCTTTTGCTTGCTCTCTCCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: LMRYSPGFHFIS*RLQLLLALSMS Trigger: GGACATGGAGAGAGCAAGCAAAAGCTGGAGTCTCAAGGAGATGAAGTGGAACCCAGGGCTGTATCTCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | TTCAGCATGGGGGTCCAGGGCCAACAGAGAGAATTCTaGTTGTATTCAAGAAGAAAGGCGAAACTCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSMGVQGQQREF*LYSRRKAKLGA Trigger: AGCTCCGAGTTTCGCCTTTCTTCTTGAATACAATCAGAATTCTCTCTGTTGGCCCTGGACCCCCATGCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CCA 72 bp | TCCCACCAGAACTGCTTCTTCAGCTTCACTGAATCTTaGGTTTATGAGCAATTCCATGGTGAAGGGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: SHQNCFFSFTES*VYEQFHGEGHQ Trigger: CTGGTGCCCTTCACCATGGAATTGCTCATAAACCCAAGATTCAGTGAAGCTGAAGAAGCAGTTCTGGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 72 bp | CACCCTGCCTGCAGAACTGTGAGAAATCAATTTCTGTaGTTAAAGCTCCCGTCCATGGTGTTTTGTTACGGC | + |
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Preference number: 6 (lower is better) Translates to: HPACRTVRNQFL*LKLPSMVFCYG Trigger: GCCGTAACAAAACACCATGGACGGGAGCTTTAACAACAGAAATTGATTTCTCACAGTTCTGCAGGCAGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | GATTCAGAGAAACCAAGCCTGCCAATATCTTGGTCCTaGACACCCTGCCTGCAGAACTGTGAGAAATCAATT | + |
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Preference number: 6 (lower is better) Translates to: DSEKPSLPISWS*TPCLQNCEKSI Trigger: AATTGATTTCTCACAGTTCTGCAGGCAGGGTGTTCAGGACCAAGATATTGGCAGGCTTGGTTTCTCTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | CCATGGTGTTTTGTTACGGCAGCCCTAGCAAACTCATaGAGAAAACCTCTTACTATCTGCATGATCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PWCFVTAALANS*RKPLTICMICL Trigger: TAAACAGATCATGCAGATAGTAAGAGGTTTTCTGCATGAGTTTGCTAGGGCTGCCGTAACAAAACACCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS GCA 72 bp | CATATTTCCATGCGGCAGCTCAATGCACTCAGCCAATaGATAAAGGAAGCCAGTGGAAGGTTATCAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: HISMRQLNALSQ*IKEASGRLSIN Trigger: ATTTATTGATAACCTTCCACTGGCTTCCTTTATGCATTGGCTGAGTGCATTGAGCTGCCGCATGGAAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 90 bp | TCCCCATCTTTGTGTGAGTTCTTTGCACCTGATTCACATAAATCCTaGAATGGTACCTACTCTATAAATAGACAAACGCTTCCCGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SPSLCEFFAPDSHKS*NGTYSINRQTLPVH Trigger: ATGCACGGGAAGCGTTTGTCTATTTATAGAGTAGGTACCATTCAAGGATTTATGTGAATCAGGTGCAAAGAACTCACACAAAGATGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS TCA 72 bp | CTGCGGTGGCTTTGTACTGTGTCAATGTACCTAAGCTaGACTATGTTTCTCAGAAAATCTGAGCAAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: LRWLCTVSMYLS*TMFLRKSEQNL Trigger: CAAATTTTGCTCAGATTTTCTGAGAAACATAGTTCAGCTTAGGTACATTGACACAGTACAAAGCCACCGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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| CDS CAA 90 bp | AACAGGGAGAGTGTGAAAGATGAATACTGGATGTTTTCCAGGACTTaGCACAGTCATTCATATGCATATATACCTTGCAAATTTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: NRESVKDEYWMFSRT*HSHSYAYIPCKFPR Trigger: TCTTGGAAATTTGCAAGGTATATATGCATATGAATGACTGTGCAAAGTCCTGGAAAACATCCAGTATTCATCTTTCACACTCTCCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605270.6 |
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