Pregenerated sensors for LINC02423 (Homo sapiens)
Ensembl gene IDs: ENSG00000256750Ensembl transcript IDs: ENST00000536572.1, ENST00000542577.2, ENST00000655557.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAAATTCCTCTGTTTCTGGAGCCTGGATCTCCGGAAGTGGAGGACTaGCCTAGCCACAAAGCTCCACCCTCCTCTGATGACATCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: EIPLFLEPGSPEVED*PSHKAPPSSDDITQ Trigger: CTGTGTGATGTCATCAGAGGAGGGTGGAGCTTTGTGGCTAGGGCAGTCCTCCACTTCCGGAGATCCAGGCTCCAGAAACAGAGGAATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542577.2 |
||
| CDS TCA 90 bp | TTCCCACCAAATCCCTATTCTTTCCCACACCAGTGCTTTTGCTTATaGTATATCCTCTTCCTGGTTGCTCTTCTCCCCAGTTGCGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPPNPYSFPHQCFCL*YILFLVALLPSCDH Trigger: GTGATCGCAACTGGGGAGAAGAGCAACCAGGAAGAGGATATATCATAAGCAAAAGCACTGGTGTGGGAAAGAATAGGGATTTGGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS GCA 90 bp | TTTCCCACACCAGTGCTTTTGCTTATGATATATCCTCTTCCTGGTTaGTCTTCTCCCCAGTTGCGATCACTACTGTGTTCAAAGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FPTPVLLLMIYPLPG*SSPQLRSLLCSKLT Trigger: GGTCAGCTTTGAACACAGTAGTGATCGCAACTGGGGAGAAGAGCAACCAGGAAGAGGATATATCATAAGCAAAAGCACTGGTGTGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS CCA 90 bp | ATTCTTTCCCACACCAGTGCTTTTGCTTATGATATATCCTCTTCCTaGTTGCTCTTCTCCCCAGTTGCGATCACTACTGTGTTCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILSHTSAFAYDISSS*LLFSPVAITTVFKA Trigger: AGCTTTGAACACAGTAGTGATCGCAACTGGGGAGAAGAGCAACCAGGAAGAGGATATATCATAAGCAAAAGCACTGGTGTGGGAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS TCA 90 bp | ATATTTATTGAGCACCTATCACCCCTCAACACACTCAAGGTCCTGTaGTACACCCTGGCAATTCAAGGAGTGAAGCTGACAAAAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFIEHLSPLNTLKVL*YTLAIQGVKLTKIP Trigger: AGGAATTTTTGTCAGCTTCACTCCTTGAATTGCCAGGGTGTATCACAGGACCTTGAGTGTGTTGAGGGGTGATAGGTGCTCAATAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655557.1 |
||
| CDS CCA 90 bp | CCTGCATCCAAATCCCAGTTTCTCTACTTGATAGCTGTGAGGTCTTaGACAAGTCACTTTACTTTGGTGAACTTCGGTTTTCTTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PASKSQFLYLIAVRS*TSHFTLVNFGFLIL Trigger: CAGGATAAGAAAACCGAAGTTCACCAAAGTAAAGTGACTTGTCCAAGACCTCACAGCTATCAAGTAGAGAAACTGGGATTTGGATGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542577.2 |
||
| CDS GCA 72 bp | CTGTTTCTGGAGCCTGGATCTCCGGAAGTGGAGGACTaGCCTAGCCACAAAGCTCCACCCTCCTCTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFLEPGSPEVED*PSHKAPPSSDD Trigger: GTCATCAGAGGAGGGTGGAGCTTTGTGGCTAGGGCAGTCCTCCACTTCCGGAGATCCAGGCTCCAGAAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS CCA 72 bp | AAATTCCTCTGTTTCTGGAGCCTGGATCTCCGGAAGTaGAGGACTGCCCTAGCCACAAAGCTCCACCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KFLCFWSLDLRK*RTALATKLHPP Trigger: AGGAGGGTGGAGCTTTGTGGCTAGGGCAGTCCTCCACTTCCGGAGATCCAGGCTCCAGAAACAGAGGAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS CCA 72 bp | AAAATAGCATCCTCTCTGCTCTTTAAAGAGCTCCTCTaGCAGATGTGCGCACAGCTGTTCCACCTCCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: KIASSLLFKELL*QMCAQLFHLLP Trigger: CGGAAGGAGGTGGAACAGCTGTGCGCACATCTGCCAGAGGAGCTCTTTAAAGAGCAGAGAGGATGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542577.2 |
||
| CDS CAA 90 bp | TGTCTGGAGTCAGACAGACCTGCATCCAAATCCCAGTTTCTCTACTaGATAGCTGTGAGGTCTTGGACAAGTCACTTTACTTTGGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CLESDRPASKSQFLY*IAVRSWTSHFTLVN Trigger: GTTCACCAAAGTAAAGTGACTTGTCCAAGACCTCACAGCTATCAAGTAGAGAAACTGGGATTTGGATGCAGGTCTGTCTGACTCCAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536572.1 ENST00000542577.2 ENST00000655557.1 |
||
| CDS CAA 90 bp | TTCACACTTCCCACCAAATCCCTATTCTTTCCCACACCAGTGCTTTaGCTTATGATATATCCTCTTCCTGGTTGCTCTTCTCCCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FTLPTKSLFFPTPVL*LMIYPLPGCSSPQL Trigger: CAACTGGGGAGAAGAGCAACCAGGAAGAGGATATATCATAAGCAAAAGCACTGGTGTGGGAAAGAATAGGGATTTGGTGGGAAGTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS GCA 72 bp | CCAGTGCTTTTGCTTATGATATATCCTCTTCCTGGTTaGTCTTCTCCCCAGTTGCGATCACTACTGTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PVLLLMIYPLPG*SSPQLRSLLCS Trigger: TGAACACAGTAGTGATCGCAACTGGGGAGAAGAGCAACCAGGAAGAGGATATATCATAAGCAAAAGCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS CAA 72 bp | TTGATAGCTGTGAGGTCTTGGACAAGTCACTTTACTTaGGTGAACTTCGGTTTTCTTATCGTGAGCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LIAVRSWTSHFT*VNFGFLIVSQA Trigger: TGCCTGGCTCACGATAAGAAAACCGAAGTTCACCAAAGTAAAGTGACTTGTCCAAGACCTCACAGCTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536572.1 ENST00000655557.1 |
||
| CDS CAA 72 bp | CCCACCAAATCCCTATTCTTTCCCACACCAGTGCTTTaGCTTATGATATATCCTCTTCCTGGTTGCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PTKSLFFPTPVL*LMIYPLPGCSS Trigger: AGAAGAGCAACCAGGAAGAGGATATATCATAAGCAAAAGCACTGGTGTGGGAAAGAATAGGGATTTGGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542577.2 ENST00000655557.1 |
||
| CDS CAA 90 bp | ACCTGCATCCAAATCCCAGTTTCTCTACTTGATAGCTGTGAGGTCTaGGACAAGTCACTTTACTTTGGTGAACTTCGGTTTTCTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TCIQIPVSLLDSCEV*DKSLYFGELRFSYP Trigger: AGGATAAGAAAACCGAAGTTCACCAAAGTAAAGTGACTTGTCCAAGACCTCACAGCTATCAAGTAGAGAAACTGGGATTTGGATGCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542577.2 |
||
| CDS CAA 72 bp | CAAATCCCAGTTTCTCTACTTGATAGCTGTGAGGTCTaGGACAAGTCACTTTACTTTGGTGAACTTCGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QIPVSLLDSCEV*DKSLYFGELRF Trigger: AAACCGAAGTTCACCAAAGTAAAGTGACTTGTCCAAGACCTCACAGCTATCAAGTAGAGAAACTGGGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536572.1 ENST00000542577.2 ENST00000655557.1 |
||
| CDS CCA 72 bp | AAATCCCAGTTTCTCTACTTGATAGCTGTGAGGTCTTaGACAAGTCACTTTACTTTGGTGAACTTCGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KSQFLYLIAVRS*TSHFTLVNFGF Trigger: AAAACCGAAGTTCACCAAAGTAAAGTGACTTGTCCAAGACCTCACAGCTATCAAGTAGAGAAACTGGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536572.1 ENST00000542577.2 ENST00000655557.1 |
||