Pregenerated sensors for LINC02421 (Homo sapiens)
Ensembl gene IDs: ENSG00000255970Ensembl transcript IDs: ENST00000542219.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTTCGTGGTCTTGCTGGCTCAGGAGTGAAGCTGCGGACCTTTGCATaGTCCATTGTGCAGATGTGGAAGTCCCAGGAGCCTGGTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VRGLAGSGVKLRTFA*SIVQMWKSQEPGQP Trigger: TGGCTGACCAGGCTCCTGGGACTTCCACATCTGCACAATGGATCATGCAAAGGTCCGCAGCTTCACTCCTGAGCCAGCAAGACCACGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | CCTGGGATTCTAAAGCAGTTTCCTGATCCATGTCAGTGGGTCTCCTaGGGTCACGCACAAGTCTCTTTTAGGGCCAGGCTGCTCCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PGILKQFPDPCQWVS*GHAQVSFRARLLPQ Trigger: CTGGGGGAGCAGCCTGGCCCTAAAAGAGACTTGTGCGTGACCCCAGGAGACCCACTGACATGGATCAGGAAACTGCTTTAGAATCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | GGTGGAGAACTGAATAAAGAGATGACATGGAGAGGTGAAAGGGCCTaGGGGGAGGGTGGAAGCCCTGAGAAACGCAGGAAAGGGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: GGELNKEMTWRGERA*GEGGSPEKRRKGQE Trigger: CTCTTGCCCTTTCCTGCGTTTCTCAGGGCTTCCACCCTCCCCTCAGGCCCTTTCACCTCTCCATGTCATCTCTTTATTCAGTTCTCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 90 bp | GCCTCTTCCTCGAGTTGCTGGAGTCCAGTGGCTGCAATCCTGGGATaGACAGTGTTCTCTCTGGTCCCACTGAAGTGCTTCTCTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ASSSSCWSPVAAILG*TVFSLVPLKCFSEE Trigger: TTCTTCAGAGAAGCACTTCAGTGGGACCAGAGAGAACACTGTGCATCCCAGGATTGCAGCCACTGGACTCCAGCAACTCGAGGAAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | AGCCCTGTTCCTGGGATTCTAAAGCAGTTTCCTGATCCATGTCAGTaGGTCTCCTGGGGTCACGCACAAGTCTCTTTTAGGGCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPVPGILKQFPDPCQ*VSWGHAQVSFRARL Trigger: CAGCCTGGCCCTAAAAGAGACTTGTGCGTGACCCCAGGAGACCCACTGACATGGATCAGGAAACTGCTTTAGAATCCCAGGAACAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | GGATGTGTTCGGAGTTTCTTCCTTCTGGTAGGTTCGTGGTCTTGCTaGCTCAGGAGTGAAGCTGCGGACCTTTGCATGATCCATTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GCVRSFFLLVGSWSC*LRSEAADLCMIHCA Trigger: TGCACAATGGATCATGCAAAGGTCCGCAGCTTCACTCCTGAGCCAGCAAGACCACGAACCTACCAGAAGGAAGAAACTCCGAACACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 90 bp | GTGGGGAGTGCATTCCAGACTCTATACTGTGAATTTAGGGTTTCGTaGCAGTTTGCAAAGCTTCCTGAAGGTAGCGGGGAAGGCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VGSAFQTLYCEFRVS*QFAKLPEGSGEGLV Trigger: CACCAAGCCTTCCCCGCTACCTTCAGGAAGCTTTGCAAACTGGCACGAAACCCTAAATTCACAGTATAGAGTCTGGAATGCACTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | GTGTGGGCATTTATCAGACACCCACCTTATGCAATGCACTTTCCGTaGGTTTCGATTAACTCCCCACATGACTGGGAGAGGAGAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: VWAFIRHPPYAMHFP*VSINSPHDWERRVW Trigger: CCACACTCTCCTCTCCCAGTCATGTGGGGAGTTAATCGAAACCCACGGAAAGTGCATTGCATAAGGTGGGTGTCTGATAAATGCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | GTTTCTGAGGGTCAGGAATCTGGGAGCAGCTTAACTAACTTGTTCTaGCTCAGGGTCTTCCATGAAGTGGCAGTCGAACTGTTAGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: VSEGQESGSSLTNLF*LRVFHEVAVELLGR Trigger: ACGACCTAACAGTTCGACTGCCACTTCATGGAAGACCCTGAGCCAGAACAAGTTAGTTAAGCTGCTCCCAGATTCCTGACCCTCAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | GGCTATCACAGGGTAGGTGGGTACTGGCATATTCCTGAGTTCCGCTaGATCCTCTGCAAAAGAGGGGCAATTTCCAAAGTTTGTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GYHRVGGYWHIPEFR*ILCKRGAISKVCLL Trigger: GAGAAGACAAACTTTGGAAATTGCCCCTCTTTTGCAGAGGATTCAGCGGAACTCAGGAATATGCCAGTACCCACCTACCCTGTGATAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | TTTAGAGGCTGGCTATCACAGGGTAGGTGGGTACTGGCATATTCCTaGGTTCCGCTGAATCCTCTGCAAAAGAGGGGCAATTTCCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: FRGWLSQGRWVLAYS*VPLNPLQKRGNFQS Trigger: ACTTTGGAAATTGCCCCTCTTTTGCAGAGGATTCAGCGGAACTCAGGAATATGCCAGTACCCACCTACCCTGTGATAGCCAGCCTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 90 bp | AGAAGCCAAAGGTGTGGGCATTTATCAGACACCCACCTTATGCAATaGACTTTCCGTGGGTTTCGATTAACTCCCCACATGACTGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: RSQRCGHLSDTHLMQ*TFRGFRLTPHMTGR Trigger: TCTCCCAGTCATGTGGGGAGTTAATCGAAACCCACGGAAAGTGCATTGCATAAGGTGGGTGTCTGATAAATGCCCACACCTTTGGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | AATCTCTCTTCCAGAGTGGTATCTACCACTCCTCCTGCACTCTACTaGTTACACACCAACCCTGATACAGTGTGGGAGGGGACCATATTA | + |
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Preference number: 5 (lower is better) Translates to: NLSSRVVSTTPPALY*LHTNPDTVWEGTIL Trigger: TAATATGGTCCCCTCCCACACTGTATCAGGGTTGGTGTGTAACCAGTAGAGTGCAGGAGGAGTGGTAGATACCACTCTGGAAGAGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | GGCAATTTCCAAAGTTTGTCTTCTCAGAAGCCCCACACAGCAATTTaGAGGCACGGAAGACCATACTCTGGTCAATTTCCAAGCCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: GNFQSLSSQKPHTAI*RHGRPYSGQFPSPV Trigger: GACAGGGCTTGGAAATTGACCAGAGTATGGTCTTCCGTGCCTTCAAATTGCTGTGTGGGGCTTCTGAGAAGACAAACTTTGGAAATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | AAAGCAAGACAGGACCAAATGACATCCATAATCTCTCTTCCAGAGTaGTATCTACCACTCCTCCTGCACTCTACTGGTTACACACCAACC | + |
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Preference number: 5 (lower is better) Translates to: KARQDQMTSIISLPE*YLPLLLHSTGYTPT Trigger: GGTTGGTGTGTAACCAGTAGAGTGCAGGAGGAGTGGTAGATACCACTCTGGAAGAGAGATTATGGATGTCATTTGGTCCTGTCTTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | TATGCAATGCACTTTCCGTGGGTTTCGATTAACTCCCCACATGACTaGGAGAGGAGAGTGTGGTATTCTCTTCTTTACAGAAGCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: YAMHFPWVSINSPHD*ERRVWYSLLYRSKS Trigger: AGACTTGCTTCTGTAAAGAAGAGAATACCACACTCTCCTCTCCCAGTCATGTGGGGAGTTAATCGAAACCCACGGAAAGTGCATTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | AAGATGAGGGAAAAAGAGTTATCAGTAGAGGAGAAGCCAAAGGTGTaGGCATTTATCAGACACCCACCTTATGCAATGCACTTTCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: KMREKELSVEEKPKV*AFIRHPPYAMHFPW Trigger: CCACGGAAAGTGCATTGCATAAGGTGGGTGTCTGATAAATGCCCACACCTTTGGCTTCTCCTCTACTGATAACTCTTTTTCCCTCATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 90 bp | TTGAGGGTACAGGTTGTCTTAGAGAAAGATAAGCAGAAAACAGTATaGTATGACGGATCACCAAGCAGTGGGGAGTGCATTCCAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: LRVQVVLEKDKQKTV*YDGSPSSGECIPDS Trigger: AGAGTCTGGAATGCACTCCCCACTGCTTGGTGATCCGTCATACCATACTGTTTTCTGCTTATCTTTCTCTAAGACAACCTGTACCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | TCTGAAGAAGACAAGTTGAAGTGGTTCCCAAGAATGAACCCTAGCTaGTGGGACTCTTGCATTTCAAGCATGGTAGACAGATACAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SEEDKLKWFPRMNPS*WDSCISSMVDRYSL Trigger: CAAACTGTATCTGTCTACCATGCTTGAAATGCAAGAGTCCCATCAGCTAGGGTTCATTCTTGGGAACCACTTCAACTTGTCTTCTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | GGTGACAAGCTTGAAAGAACAAGCATCTACATAAATGAGACCATGTaGAGTGGCCCTACTTACTACACTCTTATTGCCATGTTAAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GDKLERTSIYINETM*SGPTYYTLIAMLSG Trigger: GCCACTTAACATGGCAATAAGAGTGTAGTAAGTAGGGCCACTTCACATGGTCTCATTTATGTAGATGCTTGTTCTTTCAAGCTTGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 90 bp | CTCTGGTCAATTTCCAAGCCCTGTCAATGTATCTATAGTAGATACTaGATTGGGGGTGACAAGCTTGAAAGAACAAGCATCTACATAAAT | + |
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Preference number: 5 (lower is better) Translates to: LWSISKPCQCIYSRY*IGGDKLERTSIYIN Trigger: ATTTATGTAGATGCTTGTTCTTTCAAGCTTGTCACCCCCAATTCAGTATCTACTATAGATACATTGACAGGGCTTGGAAATTGACCAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | GCCAGGCTGCTCCCCCAGGATAGTGTGTCTGGAATTGGTGGGTTTTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGACCCTCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARLLPQDSVSGIGGF*VSLTSRMKPRTLAV Trigger: CACCGCGAGGGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAAAACCCACCAATTCCAGACACACTATCCTGGGGGAGCAGCCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | GGTCTGGTATCAATGGCTGCCTCTTCCTCGAGTTGCTaGAGTCCAGTGGCTGCAATCCTGGGATGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GLVSMAASSSSC*SPVAAILGCTV Trigger: CACTGTGCATCCCAGGATTGCAGCCACTGGACTCCAGCAACTCGAGGAAGAGGCAGCCATTGATACCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | CTTGCTGGCTCAGGAGTGAAGCTGCGGACCTTTGCATaGTCCATTGTGCAGATGTGGAAGTCCCAGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LAGSGVKLRTFA*SIVQMWKSQEP Trigger: AGGCTCCTGGGACTTCCACATCTGCACAATGGATCATGCAAAGGTCCGCAGCTTCACTCCTGAGCCAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 72 bp | TCTAGGTCTGGTATCAATGGCTGCCTCTTCCTCGAGTaGCTGGAGTCCAGTGGCTGCAATCCTGGGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: SRSGINGCLFLE*LESSGCNPGMH Trigger: GTGCATCCCAGGATTGCAGCCACTGGACTCCAGCAACTCGAGGAAGAGGCAGCCATTGATACCAGACCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | CCTTCTGGTAGGTTCGTGGTCTTGCTGGCTCAGGAGTaGAGCTGCGGACCTTTGCATGATCCATTGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSGRFVVLLAQE*SCGPLHDPLCR Trigger: TCTGCACAATGGATCATGCAAAGGTCCGCAGCTTCACTCCTGAGCCAGCAAGACCACGAACCTACCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | CTAAAGCAGTTTCCTGATCCATGTCAGTGGGTCTCCTaGGGTCACGCACAAGTCTCTTTTAGGGCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LKQFPDPCQWVS*GHAQVSFRARL Trigger: CAGCCTGGCCCTAAAAGAGACTTGTGCGTGACCCCAGGAGACCCACTGACATGGATCAGGAAACTGCTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 72 bp | CTCCCCCAGGATAGTGTGTCTGGAATTGGTGGGTTTTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: LPQDSVSGIGGF*VSLTSRMKPRT Trigger: GGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAAAACCCACCAATTCCAGACACACTATCCTGGGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | AGATGTGGAAGTCCCAGGAGCCTGGTCAGCCACATGATTCTAGCCTaGGACTCTTCCCCCTCCAATCTCAAATGGAAGAAATGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RCGSPRSLVSHMILA*DSSPSNLKWKKWLS Trigger: GGAGAGCCATTTCTTCCATTTGAGATTGGAGGGGGAAGAGTCCAAGGCTAGAATCATGTGGCTGACCAGGCTCCTGGGACTTCCACATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | TTAGTGAATTCTAGGTCTGGTATCAATGGCTGCCTCTTCCTCGAGTaGCTGGAGTCCAGTGGCTGCAATCCTGGGATGCACAGTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVNSRSGINGCLFLE*LESSGCNPGMHSVL Trigger: GAGAACACTGTGCATCCCAGGATTGCAGCCACTGGACTCCAGCAACTCGAGGAAGAGGCAGCCATTGATACCAGACCTAGAATTCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | TGGCTATCACAGGGTAGGTGGGTACTGGCATATTCCTaGGTTCCGCTGAATCCTCTGCAAAAGAGGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: WLSQGRWVLAYS*VPLNPLQKRGN Trigger: ATTGCCCCTCTTTTGCAGAGGATTCAGCGGAACTCAGGAATATGCCAGTACCCACCTACCCTGTGATAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | CCTGGGATTCTAAAGCAGTTTCCTGATCCATGTCAGTaGGTCTCCTGGGGTCACGCACAAGTCTCTTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PGILKQFPDPCQ*VSWGHAQVSFR Trigger: CCTAAAAGAGACTTGTGCGTGACCCCAGGAGACCCACTGACATGGATCAGGAAACTGCTTTAGAATCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 72 bp | TCTGAGGGTCAGGAATCTGGGAGCAGCTTAACTAACTaGTTCTGGCTCAGGGTCTTCCATGAAGTGGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SEGQESGSSLTN*FWLRVFHEVAV Trigger: GACTGCCACTTCATGGAAGACCCTGAGCCAGAACAAGTTAGTTAAGCTGCTCCCAGATTCCTGACCCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 72 bp | CTGGGATGCACAGTGTTCTCTCTGGTCCCACTGAAGTaGTTCTCTGAAGAAGACAAGTTGAAGTGGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGCTVFSLVPLK*FSEEDKLKWFP Trigger: TGGGAACCACTTCAACTTGTCTTCTTCAGAGAAGCACTTCAGTGGGACCAGAGAGAACACTGTGCATCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | TGTCCTTTTTCTTTCCCCACTTTGTGGACTGGAACATaGACCACTCCAGTGATGGCAAAGAGGGAAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CPFSFPTLWTGT*TTPVMAKREEG Trigger: TCCCTCTTCCCTCTTTGCCATCACTGGAGTGGTCCATGTTCCAGTCCACAAAGTGGGGAAAGAAAAAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | GTGCATTCCAGACTCTATACTGTGAATTTAGGGTTTCGTGCCAGTTaGCAAAGCTTCCTGAAGGTAGCGGGGAAGGCTTGGTGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: VHSRLYTVNLGFRAS*QSFLKVAGKAWWRT Trigger: AGTTCTCCACCAAGCCTTCCCCGCTACCTTCAGGAAGCTTTGCAAACTGGCACGAAACCCTAAATTCACAGTATAGAGTCTGGAATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | CACACTGTTTCTGAGGGTCAGGAATCTGGGAGCAGCTTAACTAACTaGTTCTGGCTCAGGGTCTTCCATGAAGTGGCAGTCGAACTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HTVSEGQESGSSLTN*FWLRVFHEVAVELL Trigger: TAACAGTTCGACTGCCACTTCATGGAAGACCCTGAGCCAGAACAAGTTAGTTAAGCTGCTCCCAGATTCCTGACCCTCAGAAACAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | AGGGTAGGTGGGTACTGGCATATTCCTGAGTTCCGCTaGATCCTCTGCAAAAGAGGGGCAATTTCCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RVGGYWHIPEFR*ILCKRGAISKV Trigger: AACTTTGGAAATTGCCCCTCTTTTGCAGAGGATTCAGCGGAACTCAGGAATATGCCAGTACCCACCTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 72 bp | AGGTGTGGGCATTTATCAGACACCCACCTTATGCAATaGACTTTCCGTGGGTTTCGATTAACTCCCCACATG | + |
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Preference number: 6 (lower is better) Translates to: RCGHLSDTHLMQ*TFRGFRLTPHM Trigger: CATGTGGGGAGTTAATCGAAACCCACGGAAAGTGCATTGCATAAGGTGGGTGTCTGATAAATGCCCACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | TTTATCAGACACCCACCTTATGCAATGCACTTTCCGTaGGTTTCGATTAACTCCCCACATGACTGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: FIRHPPYAMHFP*VSINSPHDWER Trigger: CCTCTCCCAGTCATGTGGGGAGTTAATCGAAACCCACGGAAAGTGCATTGCATAAGGTGGGTGTCTGATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | CTCACCTTAGATGGGCTTCAGCTATACCTTTGTAAGTaGTGGACATTTCTGCAGGGGGAGGTAAATAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LTLDGLQLYLCK*WTFLQGEVNSG Trigger: GCCACTATTTACCTCCCCCTGCAGAAATGTCCACCACTTACAAAGGTATAGCTGAAGCCCATCTAAGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 72 bp | AGACTCTATACTGTGAATTTAGGGTTTCGTGCCAGTTaGCAAAGCTTCCTGAAGGTAGCGGGGAAGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLYTVNLGFRAS*QSFLKVAGKAW Trigger: CCAAGCCTTCCCCGCTACCTTCAGGAAGCTTTGCAAACTGGCACGAAACCCTAAATTCACAGTATAGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | GGGCAATTTCCAAAGTTTGTCTTCTCAGAAGCCCCACACAGCAATTaGAAGGCACGGAAGACCATACTCTGGTCAATTTCCAAGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GQFPKFVFSEAPHSN*KARKTILWSISKPC Trigger: ACAGGGCTTGGAAATTGACCAGAGTATGGTCTTCCGTGCCTTCAAATTGCTGTGTGGGGCTTCTGAGAAGACAAACTTTGGAAATTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 72 bp | GCATTCCAGACTCTATACTGTGAATTTAGGGTTTCGTaGCAGTTTGCAAAGCTTCCTGAAGGTAGCGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AFQTLYCEFRVS*QFAKLPEGSGE Trigger: TTCCCCGCTACCTTCAGGAAGCTTTGCAAACTGGCACGAAACCCTAAATTCACAGTATAGAGTCTGGAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS GCA 72 bp | GACCATGTGAAGTGGCCCTACTTACTACACTCTTATTaGCATGTTAAGTGGCACCAGATTGAGGGTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: DHVKWPYLLHSY*HVKWHQIEGTG Trigger: ACCTGTACCCTCAATCTGGTGCCACTTAACATGGCAATAAGAGTGTAGTAAGTAGGGCCACTTCACATGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | CACTTTCCGTGGGTTTCGATTAACTCCCCACATGACTaGGAGAGGAGAGTGTGGTATTCTCTTCTTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: HFPWVSINSPHD*ERRVWYSLLYR Trigger: TCTGTAAAGAAGAGAATACCACACTCTCCTCTCCCAGTCATGTGGGGAGTTAATCGAAACCCACGGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | GACAAGTTGAAGTGGTTCCCAAGAATGAACCCTAGCTaGTGGGACTCTTGCATTTCAAGCATGGTAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: DKLKWFPRMNPS*WDSCISSMVDR Trigger: TCTGTCTACCATGCTTGAAATGCAAGAGTCCCATCAGCTAGGGTTCATTCTTGGGAACCACTTCAACTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | ACCTTAGATGGGCTTCAGCTATACCTTTGTAAGTGGTaGACATTTCTGCAGGGGGAGGTAAATAGTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: TLDGLQLYLCKW*TFLQGEVNSGN Trigger: ATTGCCACTATTTACCTCCCCCTGCAGAAATGTCCACCACTTACAAAGGTATAGCTGAAGCCCATCTAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | CAGGTTGTCTTAGAGAAAGATAAGCAGAAAACAGTATaGTATGACGGATCACCAAGCAGTGGGGAGTGCATT | + |
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Preference number: 6 (lower is better) Translates to: QVVLEKDKQKTV*YDGSPSSGECI Trigger: AATGCACTCCCCACTGCTTGGTGATCCGTCATACCATACTGTTTTCTGCTTATCTTTCTCTAAGACAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | TGGCCCTACTTACTACACTCTTATTGCCATGTTAAGTaGCACCAGATTGAGGGTACAGGTTGTCTTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: WPYLLHSYCHVK*HQIEGTGCLRE Trigger: TTCTCTAAGACAACCTGTACCCTCAATCTGGTGCCACTTAACATGGCAATAAGAGTGTAGTAAGTAGGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CCA 72 bp | CCACACAGCAATTTGAAGGCACGGAAGACCATACTCTaGTCAATTTCCAAGCCCTGTCAATGTATCTATAGT | + |
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Preference number: 6 (lower is better) Translates to: PHSNLKARKTIL*SISKPCQCIYS Trigger: ACTATAGATACATTGACAGGGCTTGGAAATTGACCAGAGTATGGTCTTCCGTGCCTTCAAATTGCTGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | TCTATAGCTGCACAAAAACTTGCCAAAAATGTGTCAGTCTGGTATTaGTCTTTCACACTGTTTCTGAGGGTCAGGAATCTGGGAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SIAAQKLAKNVSVWY*SFTLFLRVRNLGAA Trigger: AGCTGCTCCCAGATTCCTGACCCTCAGAAACAGTGTGAAAGACAAATACCAGACTGACACATTTTTGGCAAGTTTTTGTGCAGCTATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 90 bp | GGCCCTACTTACTACACTCTTATTGCCATGTTAAGTGGCACCAGATaGAGGGTACAGGTTGTCTTAGAGAAAGATAAGCAGAAAACAGTA | + |
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Preference number: 6 (lower is better) Translates to: GPTYYTLIAMLSGTR*RVQVVLEKDKQKTV Trigger: TACTGTTTTCTGCTTATCTTTCTCTAAGACAACCTGTACCCTCAATCTGGTGCCACTTAACATGGCAATAAGAGTGTAGTAAGTAGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS CAA 72 bp | GCACAAAAACTTGCCAAAAATGTGTCAGTCTGGTATTaGTCTTTCACACTGTTTCTGAGGGTCAGGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: AQKLAKNVSVWY*SFTLFLRVRNL Trigger: CAGATTCCTGACCCTCAGAAACAGTGTGAAAGACAAATACCAGACTGACACATTTTTGGCAAGTTTTTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | AAGATTTTTAATACACCAGTGACAATACAGAGATACTaGCACGATAGGCAAATGGGAGAGTACGGAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KIFNTPVTIQRY*HDRQMGEYGVW Trigger: CCAAACTCCGTACTCTCCCATTTGCCTATCGTGTCAGTATCTCTGTATTGTCACTGGTGTATTAAAAATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | AGAGTGTGGTATTCTCTTCTTTACAGAAGCAAGTCTTaGACCCAGGATCATTTGCATCCAAATCACACACTA | + |
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Preference number: 6 (lower is better) Translates to: RVWYSLLYRSKS*TQDHLHPNHTL Trigger: TAGTGTGTGATTTGGATGCAAATGATCCTGGGTTCAAGACTTGCTTCTGTAAAGAAGAGAATACCACACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | CTTGAAAGAACAAGCATCTACATAAATGAGACCATGTaGAGTGGCCCTACTTACTACACTCTTATTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: LERTSIYINETM*SGPTYYTLIAM Trigger: CATGGCAATAAGAGTGTAGTAAGTAGGGCCACTTCACATGGTCTCATTTATGTAGATGCTTGTTCTTTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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| CDS TCA 72 bp | ATTTCCAAGCCCTGTCAATGTATCTATAGTAGATACTaGATTGGGGGTGACAAGCTTGAAAGAACAAGCATC | + |
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Preference number: 6 (lower is better) Translates to: ISKPCQCIYSRY*IGGDKLERTSI Trigger: GATGCTTGTTCTTTCAAGCTTGTCACCCCCAATTCAGTATCTACTATAGATACATTGACAGGGCTTGGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542219.1 |
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