Pregenerated sensors for LINC02403 (Homo sapiens)

Ensembl gene IDs: ENSG00000257541

Ensembl transcript IDs: ENST00000548215.1, ENST00000576472.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCCTCCGGTATCACAGATGCGGGATTTCCACTACAGCCCATTTACTaGGTGTTCTGCATTTCACACATATTCAATGGGCCCTGCTTCTCA	+
Preference number: 5 (lower is better) Translates to: PSGITDAGFPLQPIY*VFCISHIFNGPCFS Trigger: TGAGAAGCAGGGCCCATTGAATATGTGTGAAATGCAGAACACTCAGTAAATGGGCTGTAGTGGAAATCCCGCATCTGTGATACCGGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548215.1 ENST00000576472.2
CDS GCA 90 bp	ATCTACCAGCAGCCAGAAATACACAAACCCCTCCGGTATCACAGATaGGGGATTTCCACTACAGCCCATTTACTGAGTGTTCTGCATTTC	+
Preference number: 5 (lower is better) Translates to: IYQQPEIHKPLRYHR*GISTTAHLLSVLHF Trigger: GAAATGCAGAACACTCAGTAAATGGGCTGTAGTGGAAATCCCGCATCTGTGATACCGGAGGGGTTTGTGTATTTCTGGCTGCTGGTAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548215.1 ENST00000576472.2
CDS CCA 72 bp	AGCCGATTAAAAATGAGTCCAAAAGATTGGCAAGCATaGTTTCCCGCCTTGAGGAGCACAGAACTGGCTGGG	+
Preference number: 6 (lower is better) Translates to: SRLKMSPKDWQA*FPALRSTELAG Trigger: CCCAGCCAGTTCTGTGCTCCTCAAGGCGGGAAACCATGCTTGCCAATCTTTTGGACTCATTTTTAATCGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548215.1 ENST00000576472.2
CDS GCA 72 bp	CAGCCAGAAATACACAAACCCCTCCGGTATCACAGATaGGGGATTTCCACTACAGCCCATTTACTGAGTGTT	+
Preference number: 6 (lower is better) Translates to: QPEIHKPLRYHR*GISTTAHLLSV Trigger: AACACTCAGTAAATGGGCTGTAGTGGAAATCCCGCATCTGTGATACCGGAGGGGTTTGTGTATTTCTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548215.1 ENST00000576472.2
CDS TCA 72 bp	ATCACAGATGCGGGATTTCCACTACAGCCCATTTACTaGGTGTTCTGCATTTCACACATATTCAATGGGCCC	+
Preference number: 6 (lower is better) Translates to: ITDAGFPLQPIY*VFCISHIFNGP Trigger: GGGCCCATTGAATATGTGTGAAATGCAGAACACTCAGTAAATGGGCTGTAGTGGAAATCCCGCATCTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548215.1 ENST00000576472.2
CDS CCA 72 bp	AAATTTCCAAGCCGATTAAAAATGAGTCCAAAAGATTaGCAAGCATGGTTTCCCGCCTTGAGGAGCACAGAA	+
Preference number: 6 (lower is better) Translates to: KFPSRLKMSPKD*QAWFPALRSTE Trigger: TTCTGTGCTCCTCAAGGCGGGAAACCATGCTTGCCAATCTTTTGGACTCATTTTTAATCGGCTTGGAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548215.1 ENST00000576472.2

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