Pregenerated sensors for LINC02386 (Homo sapiens)
Ensembl gene IDs: ENSG00000257756Ensembl transcript IDs: ENST00000551202.1, ENST00000551287.1, ENST00000552182.6, ENST00000655472.1, ENST00000660164.1, ENST00000663022.1, ENST00000666420.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACACTGGTGACAAACAAGGCAGACAGTACTCCTGAGCTTTGCTCCTaGGCTTTCTTCTGGCCACGGATATGGGGCGGTGGGGAGTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TLVTNKADSTPELCS*AFFWPRIWGGGESG Trigger: TCCTGACTCCCCACCGCCCCATATCCGTGGCCAGAAGAAAGCTCAGGAGCAAAGCTCAGGAGTACTGTCTGCCTTGTTTGTCACCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551287.1 |
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| CDS TCA 90 bp | CACTGTGCTAGTCACACTGGTGACAAACAAGGCAGACAGTACTCCTaGGCTTTGCTCCTGAGCTTTCTTCTGGCCACGGATATGGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: HCASHTGDKQGRQYS*ALLLSFLLATDMGR Trigger: CCGCCCCATATCCGTGGCCAGAAGAAAGCTCAGGAGCAAAGCTCAGGAGTACTGTCTGCCTTGTTTGTCACCAGTGTGACTAGCACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551287.1 |
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| CDS CCA 90 bp | GAGGAGTTGGAAGGAGACCCTCAAATCCATCTTCCTGAGGAATTCTaGGCTAGGGTTTTTAAGAGGATCATGGAGGGCAAGGGACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: EELEGDPQIHLPEEF*ARVFKRIMEGKGLE Trigger: CTCCAGTCCCTTGCCCTCCATGATCCTCTTAAAAACCCTAGCCCAGAATTCCTCAGGAAGATGGATTTGAGGGTCTCCTTCCAACTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000551202.1 ENST00000552182.6 ENST00000655472.1 ENST00000660164.1 ENST00000663022.1 ENST00000666420.1 |
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| CDS GCA 90 bp | TCAGTTGAGTCAGTGGAGTCCTTTGGACCTGCTGGCATCTTTAGCTaGTGTGGCCATCATAGTCCAGGTCCCAAGAATGGGTGGAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: SVESVESFGPAGIFS*CGHHSPGPKNGWKN Trigger: ATTTTTCCACCCATTCTTGGGACCTGGACTATGATGGCCACAGCAGCTAAAGATGCCAGCAGGTCCAAAGGACTCCACTGACTCAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551202.1 |
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| CDS TCA 72 bp | ACAAACAAGGCAGACAGTACTCCTGAGCTTTGCTCCTaGGCTTTCTTCTGGCCACGGATATGGGGCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TNKADSTPELCS*AFFWPRIWGGG Trigger: CCCACCGCCCCATATCCGTGGCCAGAAGAAAGCTCAGGAGCAAAGCTCAGGAGTACTGTCTGCCTTGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551287.1 |
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| CDS TCA 72 bp | ACACAGTTATATCCAGTGAGGTCGGGGGCGGGCTGTTaGCAGCTTCCATTAATTCCACTGGGACAGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: TQLYPVRSGAGC*QLPLIPLGQAS Trigger: GCTTGCCTGTCCCAGTGGAATTAATGGAAGCTGTCAACAGCCCGCCCCCGACCTCACTGGATATAACTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000551287.1 ENST00000655472.1 ENST00000660164.1 ENST00000663022.1 ENST00000666420.1 |
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| CDS GCA 72 bp | TCAGTGGAGTCCTTTGGACCTGCTGGCATCTTTAGCTaGTGTGGCCATCATAGTCCAGGTCCCAAGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: SVESFGPAGIFS*CGHHSPGPKNG Trigger: CCCATTCTTGGGACCTGGACTATGATGGCCACAGCAGCTAAAGATGCCAGCAGGTCCAAAGGACTCCACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551202.1 |
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| CDS GCA 72 bp | TATGCAGAACCTGAAGGAGTATCTGGCATCTTTAGCTaGTGTGGCCATCATAGTCCAGGTCCCAAGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: YAEPEGVSGIFS*CGHHSPGPKNG Trigger: CCCATTCTTGGGACCTGGACTATGATGGCCACAGCAGCTAAAGATGCCAGATACTCCTTCAGGTTCTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660164.1 ENST00000663022.1 |
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| CDS CCA 72 bp | GAAGGAGACCCTCAAATCCATCTTCCTGAGGAATTCTaGGCTAGGGTTTTTAAGAGGATCATGGAGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: EGDPQIHLPEEF*ARVFKRIMEGK Trigger: CTTGCCCTCCATGATCCTCTTAAAAACCCTAGCCCAGAATTCCTCAGGAAGATGGATTTGAGGGTCTCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000551202.1 ENST00000552182.6 ENST00000655472.1 ENST00000660164.1 ENST00000663022.1 ENST00000666420.1 |
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| CDS CAA 72 bp | AGAAAGTTTAATGACCACAGGGCGCTGAGTGAGGAGTaGGAAGGAGACCCTCAAATCCATCTTCCTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RKFNDHRALSEE*EGDPQIHLPEE Trigger: TTCCTCAGGAAGATGGATTTGAGGGTCTCCTTCCAACTCCTCACTCAGCGCCCTGTGGTCATTAAACTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000551202.1 ENST00000552182.6 ENST00000655472.1 ENST00000660164.1 ENST00000663022.1 ENST00000666420.1 |
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| CDS CAA 90 bp | GTGGCCATCATAGTCCAGGTCCCAAGAATGGGTGGAAAAATCATCTaGGTCATTCCAACAGCCATTCATGCATGGAAGGCAGCAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: VAIIVQVPRMGGKII*VIPTAIHAWKAAKL Trigger: CAGTTTTGCTGCCTTCCATGCATGAATGGCTGTTGGAATGACCAAGATGATTTTTCCACCCATTCTTGGGACCTGGACTATGATGGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000552182.6 ENST00000666420.1 |
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| CDS CCA 72 bp | CTGAGGAATTCTGGGCTAGGGTTTTTAAGAGGATCATaGAGGGCAAGGGACTGGAGAATTAGGATTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LRNSGLGFLRGS*RARDWRIRIVD Trigger: ATCAACAATCCTAATTCTCCAGTCCCTTGCCCTCCATGATCCTCTTAAAAACCCTAGCCCAGAATTCCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000551202.1 ENST00000552182.6 ENST00000655472.1 ENST00000660164.1 ENST00000663022.1 ENST00000666420.1 |
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| CDS CAA 72 bp | ATAGTCCAGGTCCCAAGAATGGGTGGAAAAATCATCTaGGTCATTCCAACAGCCATTCATGCATGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IVQVPRMGGKII*VIPTAIHAWKA Trigger: TGCCTTCCATGCATGAATGGCTGTTGGAATGACCAAGATGATTTTTCCACCCATTCTTGGGACCTGGACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000552182.6 ENST00000666420.1 |
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| CDS CAA 90 bp | TCTCTGGAACCTATCCAGTCTTCATTCGATACCACCCTGAAAAAGTaGTCTCAGATATTAGCGCTCAGTTTACCCTACTTTCTGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLEPIQSSFDTTLKK*SQILALSLPYFLAE Trigger: CTCAGCCAGAAAGTAGGGTAAACTGAGCGCTAATATCTGAGACAACTTTTTCAGGGTGGTATCGAATGAAGACTGGATAGGTTCCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551287.1 |
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| CDS CAA 72 bp | CTTGTGAGCCATTGTCTGAAAGATCTGGAGTCTGAGTaGTTGAGCTCCTTCTGTTTTCAGCTCTTTAGTATG | + |
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Preference number: 6 (lower is better) Translates to: LVSHCLKDLESE*LSSFCFQLFSM Trigger: CATACTAAAGAGCTGAAAACAGAAGGAGCTCAACAACTCAGACTCCAGATCTTTCAGACAATGGCTCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551287.1 |
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| CDS CAA 72 bp | CCTATCCAGTCTTCATTCGATACCACCCTGAAAAAGTaGTCTCAGATATTAGCGCTCAGTTTACCCTACTTT | + |
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Preference number: 6 (lower is better) Translates to: PIQSSFDTTLKK*SQILALSLPYF Trigger: AAAGTAGGGTAAACTGAGCGCTAATATCTGAGACAACTTTTTCAGGGTGGTATCGAATGAAGACTGGATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551287.1 |
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