Pregenerated sensors for LINC02377 (Homo sapiens)
Ensembl gene IDs: ENSG00000250102Ensembl transcript IDs: ENST00000500169.7, ENST00000505436.1, ENST00000652848.1, ENST00000654488.1, ENST00000654697.1, ENST00000663566.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AACGCTTCCACAGCATTGAAAGGGACCCAAGTGGGTTGCCACTGCTaGCTTCGGAGGCCTGCTTCCCTTATCTGGCCCCACCCACATCCT | + |
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Preference number: 5 (lower is better) Translates to: NASTALKGTQVGCHC*LRRPASLIWPHPHP Trigger: AGGATGTGGGTGGGGCCAGATAAGGGAAGCAGGCCTCCGAAGCCAGCAGTGGCAACCCACTTGGGTCCCTTTCAATGCTGTGGAAGCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652848.1 ENST00000663566.1 |
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| CDS CCA 90 bp | ACAGCTCTTAAAGGCAGTGCGTCTGGAGTTGTTCATTCCTTCCGGTaGGTTCGTGGTCTCCCTGGCCTCAGGGGTGAAGCTGCAGACCTT | + |
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Preference number: 5 (lower is better) Translates to: TALKGSASGVVHSFR*VRGLPGLRGEAADL Trigger: AAGGTCTGCAGCTTCACCCCTGAGGCCAGGGAGACCACGAACCCACCGGAAGGAATGAACAACTCCAGACGCACTGCCTTTAAGAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS TCA 90 bp | GTTGAGGTGGGAGGAACACTGGGGATCAGGATGTTGAGGCTGCAGTaGGCCTTGATCACGACGCTGCACTCTAGCTTAGGCAACAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: VEVGGTLGIRMLRLQ*ALITTLHSSLGNKV Trigger: CACTTTGTTGCCTAAGCTAGAGTGCAGCGTCGTGATCAAGGCTCACTGCAGCCTCAACATCCTGATCCCCAGTGTTCCTCCCACCTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654488.1 ENST00000663566.1 |
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| CDS CCA 90 bp | CAGAGTTGTTCATTCCTCCTGTCCGGAGTTGTTTGTCCCGCCCTGTaGGTTTGTGGTCTTGCTGGCTTCAGGAGTGAAACTGCAGACACT | + |
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Preference number: 5 (lower is better) Translates to: QSCSFLLSGVVCPAL*VCGLAGFRSETADT Trigger: AGTGTCTGCAGTTTCACTCCTGAAGCCAGCAAGACCACAAACCCACAGGGCGGGACAAACAACTCCGGACAGGAGGAATGAACAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS TCA 90 bp | GCAAGATTTATTGAGAAGAGTGAAAGAACAACGCTTCCACAGCATTaGAAGGGACCCAAGTGGGTTGCCACTGCTGGCTTCGGAGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ARFIEKSERTTLPQH*KGPKWVATAGFGGL Trigger: CAGGCCTCCGAAGCCAGCAGTGGCAACCCACTTGGGTCCCTTTCAATGCTGTGGAAGCGTTGTTCTTTCACTCTTCTCAATAAATCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS CCA 90 bp | AGCTTAGGCAACAAAGTGAGACTCGGAATTGGTGGGTTCTTGGTCTaGCTGACTTCAAGAATGAAGCGGTTGACCCTCACGGTGAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: SLGNKVRLGIGGFLV*LTSRMKRLTLTVSV Trigger: AACACTCACCGTGAGGGTCAACCGCTTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGAGTCTCACTTTGTTGCCTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654488.1 ENST00000663566.1 |
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| CDS CCA 90 bp | TGTTCCTTCAGATGTTCAGATGTGTCGGGAGTTTCTTCCTTCTGTTaGGTTTGTGGTCTCGCTGACTTCAGGAGTGAAGCTGCAGACATC | + |
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Preference number: 5 (lower is better) Translates to: CSFRCSDVSGVSSFC*VCGLADFRSEAADI Trigger: GATGTCTGCAGCTTCACTCCTGAAGTCAGCGAGACCACAAACCCAACAGAAGGAAGAAACTCCCGACACATCTGAACATCTGAAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS TCA 90 bp | AGCTGTTGTGATTTCTTTGAGGTTATCCTAGAATACTGGGGAAGATaGAGGCAGCCAGCCTGCCTTAGCAATAGCCTGGACAGAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: SCCDFFEVILEYWGR*RQPACLSNSLDRMR Trigger: TCTCATTCTGTCCAGGCTATTGCTAAGGCAGGCTGGCTGCCTTCATCTTCCCCAGTATTCTAGGATAACCTCAAAGAAATCACAACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505436.1 |
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| CDS GCA 90 bp | TTAGAGCTGCTGTTTCCAGGAGTCCTGGACAGAATGAGATCCAGCTaGTTGCTCTCATGGTCCAATAACATGATTCAGATAGACGGAATT | + |
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Preference number: 5 (lower is better) Translates to: LELLFPGVLDRMRSS*LLSWSNNMIQIDGI Trigger: AATTCCGTCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGACTCCTGGAAACAGCAGCTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500169.7 |
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| CDS TCA 90 bp | CTTTTATTTGATCCATTTGCTAGCTCTTTGAGGATTCATTTACCTTaGTGTCGCACCAATCAAGTTATATGTTGGAGCCAGCAATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLFDPFASSLRIHLP*CRTNQVICWSQQCS Trigger: TGAACATTGCTGGCTCCAACATATAACTTGATTGGTGCGACATCAAGGTAAATGAATCCTCAAAGAGCTAGCAAATGGATCAAATAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505436.1 |
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| CDS CCA 90 bp | GTATATTTGTACCTGGACAGAATGAGATCCAGCTGCTTGCTCTCATaGTCCAATAACATGATTCAGATAGATTCAGCATTAAATGACTTT | + |
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Preference number: 5 (lower is better) Translates to: VYLYLDRMRSSCLLS*SNNMIQIDSALNDF Trigger: AAAGTCATTTAATGCTGAATCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGTACAAATATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652848.1 |
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| CDS CCA 72 bp | AAAGGCAGTGCGTCTGGAGTTGTTCATTCCTTCCGGTaGGTTCGTGGTCTCCCTGGCCTCAGGGGTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: KGSASGVVHSFR*VRGLPGLRGEA Trigger: AGCTTCACCCCTGAGGCCAGGGAGACCACGAACCCACCGGAAGGAATGAACAACTCCAGACGCACTGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS CCA 72 bp | TGCCACTGCTGGCTTCGGAGGCCTGCTTCCCTTATCTaGCCCCACCCACATCCTGCTGATTGTCCATGTTAC | + |
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Preference number: 6 (lower is better) Translates to: CHCWLRRPASLI*PHPHPADCPCY Trigger: GTAACATGGACAATCAGCAGGATGTGGGTGGGGCCAGATAAGGGAAGCAGGCCTCCGAAGCCAGCAGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652848.1 |
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| CDS CAA 72 bp | GGCGCGTCCAGAGTTGTTCATTCCTCCTGTCCGGAGTaGTTTGTCCCGCCCTGTGGGTTTGTGGTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GASRVVHSSCPE*FVPPCGFVVLL Trigger: CAGCAAGACCACAAACCCACAGGGCGGGACAAACAACTCCGGACAGGAGGAATGAACAACTCTGGACGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS CAA 72 bp | CAACGCTTCCACAGCATTGAAAGGGACCCAAGTGGGTaGCCACTGCTGGCTTCGGAGGCCTGCTTCCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: QRFHSIERDPSG*PLLASEACFPY Trigger: ATAAGGGAAGCAGGCCTCCGAAGCCAGCAGTGGCAACCCACTTGGGTCCCTTTCAATGCTGTGGAAGCGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000663566.1 |
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| CDS CAA 72 bp | CGTCCAGAGTTGTTCATTCCTCCTGTCCGGAGTTGTTaGTCCCGCCCTGTGGGTTTGTGGTCTTGCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RPELFIPPVRSC*SRPVGLWSCWL Trigger: AAGCCAGCAAGACCACAAACCCACAGGGCGGGACAAACAACTCCGGACAGGAGGAATGAACAACTCTGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS CCA 72 bp | CAAGGAAAGTCCCTTCTGCCTATGAGCCGGAATTGGTaGGTTCTTGGTCTGGCTGACTTCAAGAATGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: QGKSLLPMSRNW*VLGLADFKNEA Trigger: CGCTTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGGCTCATAGGCAGAAGGGACTTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652848.1 |
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| CDS CCA 72 bp | CAGAATAGTGATTCAAGGTGGCTCACTAGAGGCATCTaGCATTCATCTGTGGTCCCAGCTACTTGGGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: QNSDSRWLTRGI*HSSVVPATWEV Trigger: AACCTCCCAAGTAGCTGGGACCACAGATGAATGCCAGATGCCTCTAGTGAGCCACCTTGAATCACTATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654488.1 ENST00000663566.1 |
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| CDS CCA 72 bp | ATGATTCAGATAGACGGAATTGGTGGGTTCTTGGTCTaGCTGACTTCAAGAATGAAGCGGTTGACCCTCACG | + |
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Preference number: 6 (lower is better) Translates to: MIQIDGIGGFLV*LTSRMKRLTLT Trigger: CGTGAGGGTCAACCGCTTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGTCTATCTGAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500169.7 ENST00000654697.1 |
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| CDS CCA 72 bp | AGACAAGGAAAGTCCCTTCTGCCTATGAGCCGGAATTaGTGGGTTCTTGGTCTGGCTGACTTCAAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: RQGKSLLPMSRN*WVLGLADFKNE Trigger: TTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGGCTCATAGGCAGAAGGGACTTTCCTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652848.1 |
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| CDS CAA 72 bp | TTAGGCAACAAAGTGAGACTCGGAATTGGTGGGTTCTaGGTCTGGCTGACTTCAAGAATGAAGCGGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: LGNKVRLGIGGF*VWLTSRMKRLT Trigger: GGTCAACCGCTTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGAGTCTCACTTTGTTGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654488.1 ENST00000663566.1 |
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| CDS CAA 90 bp | CATAACAGCGGGGCAGACCCAAAGAGTGAGCAGCAGCAAGATTTATaGAGAAGAGTGAAAGAACAACGCTTCCACAGCATTGAAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: HNSGADPKSEQQQDL*RRVKEQRFHSIERD Trigger: GTCCCTTTCAATGCTGTGGAAGCGTTGTTCTTTCACTCTTCTCAATAAATCTTGCTGCTGCTCACTCTTTGGGTCTGCCCCGCTGTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000500169.7 ENST00000652848.1 ENST00000654488.1 ENST00000654697.1 ENST00000663566.1 |
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| CDS CAA 90 bp | TCATGGTCCAATAACATGATTCAGATAGACGGAATTGGTGGGTTCTaGGTCTGGCTGACTTCAAGAATGAAGCGGTTGACCCTCACGGTG | + |
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Preference number: 6 (lower is better) Translates to: SWSNNMIQIDGIGGF*VWLTSRMKRLTLTV Trigger: CACCGTGAGGGTCAACCGCTTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGTCTATCTGAATCATGTTATTGGACCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500169.7 ENST00000654697.1 |
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| CDS CAA 90 bp | GAGCTGCTGTTTCCAGGAGTCCTGGACAGAATGAGATCCAGCTGCTaGCTCTCATGGTCCAATAACATGATTCAGATAGACGGAATTGGT | + |
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Preference number: 6 (lower is better) Translates to: ELLFPGVLDRMRSSC*LSWSNNMIQIDGIG Trigger: ACCAATTCCGTCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGACTCCTGGAAACAGCAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500169.7 |
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| CDS TCA 72 bp | CCAGCATGGCCAAAAATGATGAAACCCTGGACAGAATaGGATCCAGCTGCTTGCTCTCATGGTCCAATAACA | + |
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Preference number: 6 (lower is better) Translates to: PAWPKMMKPWTE*DPAACSHGPIT Trigger: TGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGGTTTCATCATTTTTGGCCATGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654488.1 |
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| CDS CCA 72 bp | GTCCTGGACAGAATGAGATCCAGCTGCTTGCTCTCATaGTCCAATAACATGATTCAGATAGACGGAATTGGT | + |
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Preference number: 6 (lower is better) Translates to: VLDRMRSSCLLS*SNNMIQIDGIG Trigger: ACCAATTCCGTCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500169.7 |
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| CDS CCA 72 bp | CAGCTGGACAGAATGAGATCCAGCTGCTTGCTCTCATaGTCCAATAACATGATTCAGATAGACGGAATTGGT | + |
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Preference number: 6 (lower is better) Translates to: QLDRMRSSCLLS*SNNMIQIDGIG Trigger: ACCAATTCCGTCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654697.1 |
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| CDS CAA 72 bp | AATAACATGATTCAGATAGACGGAATTGGTGGGTTCTaGGTCTGGCTGACTTCAAGAATGAAGCGGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: NNMIQIDGIGGF*VWLTSRMKRLT Trigger: GGTCAACCGCTTCATTCTTGAAGTCAGCCAGACCAAGAACCCACCAATTCCGTCTATCTGAATCATGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500169.7 ENST00000654697.1 |
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| CDS CAA 72 bp | AATGATGAAACCCTGGACAGAATGAGATCCAGCTGCTaGCTCTCATGGTCCAATAACATGATTCAGATAGAC | + |
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Preference number: 6 (lower is better) Translates to: NDETLDRMRSSC*LSWSNNMIQID Trigger: GTCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGGTTTCATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654488.1 |
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| CDS CCA 72 bp | TACCTGGACAGAATGAGATCCAGCTGCTTGCTCTCATaGTCCAATAACATGATTCAGATAGATTCAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: YLDRMRSSCLLS*SNNMIQIDSAL Trigger: TAATGCTGAATCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652848.1 |
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| CDS CCA 72 bp | TTTTACTCAAGATGTATTCAGAATAGTGATTCAAGGTaGCTCACTAGAGGCATCTGGCATTCATCTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FYSRCIQNSDSR*LTRGIWHSSVV Trigger: GACCACAGATGAATGCCAGATGCCTCTAGTGAGCCACCTTGAATCACTATTCTGAATACATCTTGAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654488.1 ENST00000663566.1 |
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| CDS GCA 72 bp | AAAAATGATGAAACCCTGGACAGAATGAGATCCAGCTaGTTGCTCTCATGGTCCAATAACATGATTCAGATA | + |
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Preference number: 6 (lower is better) Translates to: KNDETLDRMRSS*LLSWSNNMIQI Trigger: TATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGGTTTCATCATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654488.1 |
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| CDS CAA 72 bp | GTATATTTGTACCTGGACAGAATGAGATCCAGCTGCTaGCTCTCATGGTCCAATAACATGATTCAGATAGAT | + |
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Preference number: 6 (lower is better) Translates to: VYLYLDRMRSSC*LSWSNNMIQID Trigger: ATCTATCTGAATCATGTTATTGGACCATGAGAGCAAGCAGCTGGATCTCATTCTGTCCAGGTACAAATATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652848.1 |
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| CDS CAA 90 bp | TTTGAGGATTCATTTACCTTGATGTCGCACCAATCAAGTTATATGTaGGAGCCAGCAATGTTCACCATAAGATTCCATACAAACAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: FEDSFTLMSHQSSYM*EPAMFTIRFHTNSY Trigger: GTAGCTGTTTGTATGGAATCTTATGGTGAACATTGCTGGCTCCAACATATAACTTGATTGGTGCGACATCAAGGTAAATGAATCCTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505436.1 |
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| CDS CCA 72 bp | TTTTACTCAAGATGTATTCAGAATAGTGATTCAAGGTaGCTCACTAGAGGCATCTGGCATTCATCAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: FYSRCIQNSDSR*LTRGIWHSSVI Trigger: TATGACTGATGAATGCCAGATGCCTCTAGTGAGCCACCTTGAATCACTATTCTGAATACATCTTGAGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505436.1 |
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| CDS CAA 72 bp | TCATTTACCTTGATGTCGCACCAATCAAGTTATATGTaGGAGCCAGCAATGTTCACCATAAGATTCCATACA | + |
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Preference number: 6 (lower is better) Translates to: SFTLMSHQSSYM*EPAMFTIRFHT Trigger: TGTATGGAATCTTATGGTGAACATTGCTGGCTCCAACATATAACTTGATTGGTGCGACATCAAGGTAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505436.1 |
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| CDS TCA 72 bp | TATGTTGACAGAATAAAATTATCAGGAGCTTATATCTaGTGCAGGACTAATGAAGATACAACTTTGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: YVDRIKLSGAYI*CRTNEDTTLQD Trigger: GTCCTGCAAAGTTGTATCTTCATTAGTCCTGCATCAGATATAAGCTCCTGATAATTTTATTCTGTCAACATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654697.1 |
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| CDS TCA 72 bp | AAATCAAAGAATGTAGAAAACTTTTCACATACTCTATaGGTTCAGCATTACCCTAATACCAACAGCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: KSKNVENFSHTL*VQHYPNTNSRH Trigger: GTGTCTGCTGTTGGTATTAGGGTAATGCTGAACTCATAGAGTATGTGAAAAGTTTTCTACATTCTTTGATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654488.1 |
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| CDS GCA 72 bp | TACAAACAGCTACACTTCTCACTTCTTTGTAGACCATaGACACTATCAAAACCCAAATGTTTTAATTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: YKQLHFSLLCRP*TLSKPKCFNCR Trigger: TCTACAATTAAAACATTTGGGTTTTGATAGTGTGCATGGTCTACAAAGAAGTGAGAAGTGTAGCTGTTTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505436.1 |
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