Pregenerated sensors for LINC02375 (Homo sapiens)
Ensembl gene IDs: ENSG00000256362Ensembl transcript IDs: ENST00000545739.2, ENST00000657634.1, ENST00000670647.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACAATTAGATTGCACAAGTACAGAGCACAATCTCTCAAATCTGCTTaGTGGGCCTCTCTGTATGTTACCCCCAGGCTTTTTCTTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: TIRLHKYRAQSLKSA*WASLYVTPRLFLLG Trigger: GCCGAGAAGAAAAAGCCTGGGGGTAACATACAGAGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAATCTAATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000545739.2 |
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| CDS CCA 90 bp | ATTAGATTGCACAAGTACAGAGCACAATCTCTCAAATCTGCTTGCTaGGCCTCTCTGTATGTTACCCCCAGGCTTTTTCTTCTCGGCATC | + |
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Preference number: 5 (lower is better) Translates to: IRLHKYRAQSLKSAC*ASLYVTPRLFLLGI Trigger: GATGCCGAGAAGAAAAAGCCTGGGGGTAACATACAGAGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAATCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000545739.2 |
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| CDS GCA 90 bp | ACAATTAGATTGCACAAGTACAGAGCACAATCTCTCAAATCTGCTTaGTGGGCCTCCTACTCCATCTTCCACATGATGGCCCTTGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: TIRLHKYRAQSLKSA*WASYSIFHMMALER Trigger: TCTTTCAAGGGCCATCATGTGGAAGATGGAGTAGGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAATCTAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670647.1 |
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| CDS CCA 90 bp | ATTAGATTGCACAAGTACAGAGCACAATCTCTCAAATCTGCTTGCTaGGCCTCCTACTCCATCTTCCACATGATGGCCCTTGAAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: IRLHKYRAQSLKSAC*ASYSIFHMMALERL Trigger: AAGTCTTTCAAGGGCCATCATGTGGAAGATGGAGTAGGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAATCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670647.1 |
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| CDS TCA 90 bp | TCAGGCTATACACTCTCACTTCCTTCAGGCAATTCTACTGTGATTTaGTTTCAAAAGCCTTCAGCCCATGGACACTCTTCAGCAGAACAC | + |
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Preference number: 5 (lower is better) Translates to: SGYTLSLPSGNSTVI*FQKPSAHGHSSAEH Trigger: GTGTTCTGCTGAAGAGTGTCCATGGGCTGAAGGCTTTTGAAATCAAATCACAGTAGAATTGCCTGAAGGAAGTGAGAGTGTATAGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000545739.2 ENST00000657634.1 |
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| CDS TCA 90 bp | GACGCTTACTGGCACAATCTGCTACAAGAAACAGCTAGACGTTTTTaGCTGTACAGCTTAGTTTTGGGCTTCTGTCCTCTTAATCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: DAYWHNLLQETARRF*LYSLVLGFCPLNLS Trigger: ACTCAGATTAAGAGGACAGAAGCCCAAAACTAAGCTGTACAGTCAAAAACGTCTAGCTGTTTCTTGTAGCAGATTGTGCCAGTAAGCGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS GCA 90 bp | TTCTTCCTATTGAGGATATCAAGATATTTGGGTATGTTAATCTACTaGCATCTTCAGAAGCTTTCCCTTCAAGGAGAAAATGCCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FFLLRISRYLGMLIY*HLQKLSLQGENAFQ Trigger: CTGAAAGGCATTTTCTCCTTGAAGGGAAAGCTTCTGAAGATGGCAGTAGATTAACATACCCAAATATCTTGATATCCTCAATAGGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS GCA 90 bp | AGCAATGTTTTTCTTCTCTGGTATCCTTCCATCTTGAGCAGTTTCTaGAGTACTTCAGAAACAGAACATAGAGAGAATTTAATTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SNVFLLWYPSILSSF*STSETEHRENLISW Trigger: CCAGGAAATTAAATTCTCTCTATGTTCTGTTTCTGAAGTACTGCAGAAACTGCTCAAGATGGAAGGATACCAGAGAAGAAAAACATTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS GCA 72 bp | TTGCACAAGTACAGAGCACAATCTCTCAAATCTGCTTaGTGGGCCTCCTACTCCATCTTCCACATGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LHKYRAQSLKSA*WASYSIFHMMA Trigger: GGCCATCATGTGGAAGATGGAGTAGGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670647.1 |
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| CDS CCA 72 bp | CACAAGTACAGAGCACAATCTCTCAAATCTGCTTGCTaGGCCTCCTACTCCATCTTCCACATGATGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: HKYRAQSLKSAC*ASYSIFHMMAL Trigger: AAGGGCCATCATGTGGAAGATGGAGTAGGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670647.1 |
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| CDS GCA 72 bp | TTGCACAAGTACAGAGCACAATCTCTCAAATCTGCTTaGTGGGCCTCTCTGTATGTTACCCCCAGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LHKYRAQSLKSA*WASLYVTPRLF Trigger: AAAAAGCCTGGGGGTAACATACAGAGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000545739.2 |
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| CDS CCA 72 bp | CACAAGTACAGAGCACAATCTCTCAAATCTGCTTGCTaGGCCTCTCTGTATGTTACCCCCAGGCTTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HKYRAQSLKSAC*ASLYVTPRLFL Trigger: AAGAAAAAGCCTGGGGGTAACATACAGAGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000545739.2 |
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| CDS TCA 72 bp | GCTATACACTCTCACTTCCTTCAGGCAATTCTACTGTaGTTTGATTTCAAAAGCCTTCAGCCCATGGACACT | + |
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Preference number: 6 (lower is better) Translates to: AIHSHFLQAILL*FDFKSLQPMDT Trigger: AGTGTCCATGGGCTGAAGGCTTTTGAAATCAAATCACAGTAGAATTGCCTGAAGGAAGTGAGAGTGTATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS TCA 72 bp | TGGCACAATCTGCTACAAGAAACAGCTAGACGTTTTTaGCTGTACAGCTTAGTTTTGGGCTTCTGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: WHNLLQETARRF*LYSLVLGFCPL Trigger: AAGAGGACAGAAGCCCAAAACTAAGCTGTACAGTCAAAAACGTCTAGCTGTTTCTTGTAGCAGATTGTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS CCA 72 bp | TTCTACTGTGATTTGATTTCAAAAGCCTTCAGCCCATaGACACTCTTCAGCAGAACACAATCTGACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FYCDLISKAFSP*TLFSRTQSDFP Trigger: TGGGAAGTCAGATTGTGTTCTGCTGAAGAGTGTCCATGGGCTGAAGGCTTTTGAAATCAAATCACAGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657634.1 |
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| CDS CAA 72 bp | TACACTCTCACTTCCTTCAGGCAATTCTACTGTGATTaGATTTCAAAAGCCTTCAGCCCATGGACACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YTLTSFRQFYCD*ISKAFSPWTLF Trigger: GAAGAGTGTCCATGGGCTGAAGGCTTTTGAAATCAAATCACAGTAGAATTGCCTGAAGGAAGTGAGAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000545739.2 ENST00000657634.1 |
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| CDS TCA 72 bp | CTTATATTTTCACCAGCCCTTGAAATTACTCTTCAGTaGCGCTTACTGGCACAATCTGCTACAAGAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: LIFSPALEITLQ*RLLAQSATRNS Trigger: GCTGTTTCTTGTAGCAGATTGTGCCAGTAAGCGTCACTGAAGAGTAATTTCAAGGGCTGGTGAAAATATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS CAA 90 bp | CTGTCATCCTGTAATCAGTGTTTTATCTTATATTTTCACCAGCCCTaGAAATTACTCTTCAGTGACGCTTACTGGCACAATCTGCTACAA | + |
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Preference number: 6 (lower is better) Translates to: LSSCNQCFILYFHQP*KLLFSDAYWHNLLQ Trigger: TTGTAGCAGATTGTGCCAGTAAGCGTCACTGAAGAGTAATTTCAAGGGCTGGTGAAAATATAAGATAAAACACTGATTACAGGATGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS GCA 72 bp | TTTCTTCTCTGGTATCCTTCCATCTTGAGCAGTTTCTaGAGTACTTCAGAAACAGAACATAGAGAGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: FLLWYPSILSSF*STSETEHRENL Trigger: TAAATTCTCTCTATGTTCTGTTTCTGAAGTACTGCAGAAACTGCTCAAGATGGAAGGATACCAGAGAAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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| CDS CAA 72 bp | TGTAATCAGTGTTTTATCTTATATTTTCACCAGCCCTaGAAATTACTCTTCAGTGACGCTTACTGGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: CNQCFILYFHQP*KLLFSDAYWHN Trigger: ATTGTGCCAGTAAGCGTCACTGAAGAGTAATTTCAAGGGCTGGTGAAAATATAAGATAAAACACTGATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000545739.2 ENST00000657634.1 ENST00000670647.1 |
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