Pregenerated sensors for LINC02354 (Homo sapiens)
Ensembl gene IDs: ENSG00000257488Ensembl transcript IDs: ENST00000546523.1, ENST00000548564.1, ENST00000550684.1, ENST00000550720.5, ENST00000550909.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTACCAGAACACACTCCTCCTACCACCGCTGGCAGAGCTCTGGGCTaGGAGGGCCAAGGAGGCAGATTGAGCTCAGTAGCTCTGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LPEHTPPTTAGRALG*EGQGGRLSSVALLV Trigger: GACCAGCAGAGCTACTGAGCTCAATCTGCCTCCTTGGCCCTCCCAGCCCAGAGCTCTGCCAGCGGTGGTAGGAGGAGTGTGTTCTGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548564.1 |
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| CDS CCA 90 bp | AATACTTACCACACTCCTCCTACCACCGCTGGCAGAGCTCTGGGCTaGGAGGGCCAAGGAGGCAGATTGAGCTCAGTAGCTCTGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: NTYHTPPTTAGRALG*EGQGGRLSSVALLV Trigger: GACCAGCAGAGCTACTGAGCTCAATCTGCCTCCTTGGCCCTCCCAGCCCAGAGCTCTGCCAGCGGTGGTAGGAGGAGTGTGGTAAGTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550909.1 |
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| CDS GCA 90 bp | GGAGACTATGGAGCTCCAGGAGCCTCCCATATATGGGAGGGAATCTaGAGTGAGCACCTGGCCATCACCCCTCACGGTGGGCTTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GDYGAPGASHIWEGI*SEHLAITPHGGLFP Trigger: AGGAAAAAGCCCACCGTGAGGGGTGATGGCCAGGTGCTCACTGCAGATTCCCTCCCATATATGGGAGGCTCCTGGAGCTCCATAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS GCA 90 bp | TGGGGCGCCTCTTCCGGATCTCAGCTTCTTGGTGCTAGGGACTCCTaGTCCATGATATCTACCAGAACACACTCCTCCTACCACCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: WGASSGSQLLGARDS*SMISTRTHSSYHRW Trigger: CCAGCGGTGGTAGGAGGAGTGTGTTCTGGTAGATATCATGGAGCAGGAGTCCCTAGCACCAAGAAGCTGAGATCCGGAAGAGGCGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548564.1 |
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| CDS TCA 90 bp | CTATGGAGCTCCAGGAGCCTCCCATATATGGGAGGGAATCTGCAGTaGGCACCTGGCCATCACCCCTCACGGTGGGCTTTTTCCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LWSSRSLPYMGGNLQ*APGHHPSRWAFSFV Trigger: GACAAAGGAAAAAGCCCACCGTGAGGGGTGATGGCCAGGTGCTCACTGCAGATTCCCTCCCATATATGGGAGGCTCCTGGAGCTCCATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS TCA 90 bp | CTGAGTCGCTGTGGAACTGCTGGCTATTTGTCTGTCTTCTCACTGTaGTGCTCTGTTCCTCCTGCAGTCAGCCCTGTCCTCTGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSRCGTAGYLSVFSL*CSVPPAVSPVLWGL Trigger: CAGCCCCCAGAGGACAGGGCTGACTGCAGGAGGAACAGAGCATCACAGTGAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 90 bp | AGCAGTAGTAGAGGAGACTATGGAGCTCCAGGAGCCTCCCATATATaGGAGGGAATCTGCAGTGAGCACCTGGCCATCACCCCTCACGGT | + |
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Preference number: 5 (lower is better) Translates to: SSSRGDYGAPGASHI*EGICSEHLAITPHG Trigger: ACCGTGAGGGGTGATGGCCAGGTGCTCACTGCAGATTCCCTCCCATATATGGGAGGCTCCTGGAGCTCCATAGTCTCCTCTACTACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS GCA 90 bp | GGAGCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTaGTGGCTATTTGTCTGTCTTCTCACTGTGATGCTCTGTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GAGFEPWQSPESLWN*WLFVCLLTVMLCSS Trigger: GGAGGAACAGAGCATCACAGTGAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 90 bp | GCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTGCTaGCTATTTGTCTGTCTTCTCACTGTGATGCTCTGTTCCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGFEPWQSPESLWNC*LFVCLLTVMLCSSC Trigger: GCAGGAGGAACAGAGCATCACAGTGAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 90 bp | GAAGAGCAGCAGAAGTGGCATCTAGCAGGAGCAGGATTTGAACCCTaGCAGTCCCCTGAGTCGCTGTGGAACTGCTGGCTATTTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: EEQQKWHLAGAGFEP*QSPESLWNCWLFVC Trigger: ACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCCTGCTAGATGCCACTTCTGCTGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000546523.1 ENST00000548564.1 ENST00000550684.1 ENST00000550720.5 ENST00000550909.1 |
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| CDS CCA 90 bp | CTAGCAGGAGCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTaGAACTGCTGGCTATTTGTCTGTCTTCTCACTGTGATGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LAGAGFEPWQSPESL*NCWLFVCLLTVMLC Trigger: ACAGAGCATCACAGTGAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCCTGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 90 bp | CTGTGGAACTGCTGGCTATTTGTCTGTCTTCCTAAAAGACACTCCTaGGGAAAGAGAGGTGAGTGTCTTCAGGCCAAGACCTTCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LWNCWLFVCLPKRHS*GKRGECLQAKTFSG Trigger: CCCTGAGAAGGTCTTGGCCTGAAGACACTCACCTCTCTTTCCCCAGGAGTGTCTTTTAGGAAGACAGACAAATAGCCAGCAGTTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550684.1 |
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| CDS GCA 90 bp | GGAGCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTaGTGGCTATTTGTCTGTCTTCTTGATAGTTCATTGGAAGATTTT | + |
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Preference number: 5 (lower is better) Translates to: GAGFEPWQSPESLWN*WLFVCLLDSSLEDF Trigger: AAAATCTTCCAATGAACTATCAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546523.1 |
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| CDS GCA 90 bp | GGAGCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTaGTGGCTATTTGTCTGTCTTCTTTGTCTCATTTTAATTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: GAGFEPWQSPESLWN*WLFVCLLCLILIGI Trigger: AATGCCAATTAAAATGAGACAAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548564.1 ENST00000550909.1 |
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| CDS CCA 90 bp | CTAGCAGGAGCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTaGAACTGCTGGCTATTTGTCTGTCTTCTTTGTCTCATTTTAATT | + |
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Preference number: 5 (lower is better) Translates to: LAGAGFEPWQSPESL*NCWLFVCLLCLILI Trigger: AATTAAAATGAGACAAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCCTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548564.1 ENST00000550909.1 |
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| CDS CCA 90 bp | GCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTGCTaGCTATTTGTCTGTCTTCTTGATAGTTCATTGGAAGATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: AGFEPWQSPESLWNC*LFVCLLDSSLEDFS Trigger: AGAAAAATCTTCCAATGAACTATCAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546523.1 |
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| CDS CCA 90 bp | GTGGAACTGCTGGCTATTTGTCTGTCTTCTTTGTCTCATTTTAATTaGCATTACTTTGAGGACGATCAGGTTGAACATACCCCTACCTCT | + |
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Preference number: 5 (lower is better) Translates to: VELLAICLSSLSHFN*HYFEDDQVEHTPTS Trigger: AGAGGTAGGGGTATGTTCAACCTGATCGTCCTCAAAGTAATGCCAATTAAAATGAGACAAAGAAGACAGACAAATAGCCAGCAGTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548564.1 ENST00000550909.1 |
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| CDS TCA 72 bp | GCACGCCGCAGGGCCTGGCCTTGTCTAGGGCAGCAATaGAGAGCAGCAGAAGTGGCATCTAGCAGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ARRRAWPCLGQQ*RAAEVASSRSR Trigger: CCTGCTCCTGCTAGATGCCACTTCTGCTGCTCTTCATTGCTGCCCTAGACAAGGCCAGGCCCTGCGGCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000546523.1 ENST00000548564.1 ENST00000550684.1 ENST00000550720.5 ENST00000550909.1 |
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| CDS CCA 72 bp | CACACTCCTCCTACCACCGCTGGCAGAGCTCTGGGCTaGGAGGGCCAAGGAGGCAGATTGAGCTCAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: HTPPTTAGRALG*EGQGGRLSSVA Trigger: AGCTACTGAGCTCAATCTGCCTCCTTGGCCCTCCCAGCCCAGAGCTCTGCCAGCGGTGGTAGGAGGAGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548564.1 ENST00000550909.1 |
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| CDS CCA 72 bp | AGAGGAGACTATGGAGCTCCAGGAGCCTCCCATATATaGGAGGGAATCTGCAGTGAGCACCTGGCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: RGDYGAPGASHI*EGICSEHLAIT Trigger: GGTGATGGCCAGGTGCTCACTGCAGATTCCCTCCCATATATGGGAGGCTCCTGGAGCTCCATAGTCTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 72 bp | CAGAAGTGGCATCTAGCAGGAGCAGGATTTGAACCCTaGCAGTCCCCTGAGTCGCTGTGGAACTGCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: QKWHLAGAGFEP*QSPESLWNCWL Trigger: TAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGCTCCTGCTAGATGCCACTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000546523.1 ENST00000548564.1 ENST00000550684.1 ENST00000550720.5 ENST00000550909.1 |
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| CDS CCA 72 bp | CCTCCCATATATGGGAGGGAATCTGCAGTGAGCACCTaGCCATCACCCCTCACGGTGGGCTTTTTCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PPIYGRESAVST*PSPLTVGFFLC Trigger: ACAAAGGAAAAAGCCCACCGTGAGGGGTGATGGCCAGGTGCTCACTGCAGATTCCCTCCCATATATGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 72 bp | GAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTGCTaGCTATTTGTCTGTCTTCTCACTGTGATGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: EPWQSPESLWNC*LFVCLLTVMLC Trigger: ACAGAGCATCACAGTGAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS CCA 72 bp | GCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTaGAACTGCTGGCTATTTGTCTGTCTTCTCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: AGFEPWQSPESL*NCWLFVCLLTV Trigger: CACAGTGAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550720.5 |
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| CDS TCA 72 bp | GATCTCAGCTTCTTGGTGCTAGGGACTCCTGCTCCATaGTATCTACCAGAACACACTCCTCCTACCACCGCT | + |
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Preference number: 6 (lower is better) Translates to: DLSFLVLGTPAP*YLPEHTPPTTA Trigger: AGCGGTGGTAGGAGGAGTGTGTTCTGGTAGATATCATGGAGCAGGAGTCCCTAGCACCAAGAAGCTGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548564.1 |
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| CDS CCA 72 bp | GCAGGATTTGAACCCTGGCAGTCCCCTGAGTCGCTGTaGAACTGCTGGCTATTTGTCTGTCTTCCTAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: AGFEPWQSPESL*NCWLFVCLPKR Trigger: TCTTTTAGGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAATCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550684.1 |
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| CDS CCA 72 bp | GAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTGCTaGCTATTTGTCTGTCTTCTTGATAGTTCATTGGAA | + |
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Preference number: 6 (lower is better) Translates to: EPWQSPESLWNC*LFVCLLDSSLE Trigger: TTCCAATGAACTATCAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546523.1 |
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| CDS CCA 72 bp | TGCTGGCTATTTGTCTGTCTTCCTAAAAGACACTCCTaGGGAAAGAGAGGTGAGTGTCTTCAGGCCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: CWLFVCLPKRHS*GKRGECLQAKT Trigger: GGTCTTGGCCTGAAGACACTCACCTCTCTTTCCCCAGGAGTGTCTTTTAGGAAGACAGACAAATAGCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550684.1 |
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| CDS GCA 72 bp | TTTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTaGTGGCTATTTGTCTGTCTTCTTGATAGTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: FEPWQSPESLWN*WLFVCLLDSSL Trigger: CAATGAACTATCAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546523.1 |
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| CDS CAA 90 bp | TTGAACCCTGGCAGTCCCCTGAGTCGCTGTGGAACTGCTGGCTATTaGTCTGTCTTCTTGATAGTTCATTGGAAGATTTTTCTATCACTC | + |
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Preference number: 6 (lower is better) Translates to: LNPGSPLSRCGTAGY*SVFLIVHWKIFLSL Trigger: GAGTGATAGAAAAATCTTCCAATGAACTATCAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCCAGGGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546523.1 |
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| CDS CAA 72 bp | GGCAGTCCCCTGAGTCGCTGTGGAACTGCTGGCTATTaGTCTGTCTTCTTGATAGTTCATTGGAAGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: GSPLSRCGTAGY*SVFLIVHWKIF Trigger: AAAAATCTTCCAATGAACTATCAAGAAGACAGACAAATAGCCAGCAGTTCCACAGCGACTCAGGGGACTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546523.1 |
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| CDS CAA 72 bp | GGAATCCTGATAGTGTCTCTTACTGACTGTGTAACCTaGTGGGAAATGTGTGAGCTCTCTGATCTTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GILIVSLTDCVT*WEMCELSDLQL Trigger: AAGCTGAAGATCAGAGAGCTCACACATTTCCCACAAGGTTACACAGTCAGTAAGAGACACTATCAGGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000546523.1 ENST00000548564.1 ENST00000550684.1 ENST00000550720.5 ENST00000550909.1 |
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| CDS CAA 72 bp | CTCATTTTAATTGGCATTACTTTGAGGACGATCAGGTaGAACATACCCCTACCTCTGCTTGTGAGTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LILIGITLRTIR*NIPLPLLVSCV Trigger: AACACAACTCACAAGCAGAGGTAGGGGTATGTTCAACCTGATCGTCCTCAAAGTAATGCCAATTAAAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548564.1 ENST00000550720.5 ENST00000550909.1 |
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| CDS CAA 90 bp | TGGCTATTTGTCTGTCTTCTTTGTCTCATTTTAATTGGCATTACTTaGAGGACGATCAGGTTGAACATACCCCTACCTCTGCTTGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: WLFVCLLCLILIGIT*RTIRLNIPLPLLVS Trigger: ACTCACAAGCAGAGGTAGGGGTATGTTCAACCTGATCGTCCTCAAAGTAATGCCAATTAAAATGAGACAAAGAAGACAGACAAATAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548564.1 ENST00000550909.1 |
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