Pregenerated sensors for LINC02310 (Homo sapiens)
Ensembl gene IDs: ENSG00000258808Ensembl transcript IDs: ENST00000556762.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGAGGGCTGTGCCCAAGCAGTCAGTGAGGCTCCTGGGATGTTTCTaGCTTCCCATACATGAGAGGCGTCCTGATACTAGCAATGAACCG | + |
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Preference number: 5 (lower is better) Translates to: QRAVPKQSVRLLGCF*LPIHERRPDTSNEP Trigger: CGGTTCATTGCTAGTATCAGGACGCCTCTCATGTATGGGAAGCCAGAAACATCCCAGGAGCCTCACTGACTGCTTGGGCACAGCCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | GGTAGGTTGGGGTCCTGGAGACCTGGGCAGGGAAGATCTGTTCCTTaGGTTTGGTCAGTGAGGAGCAGAGAAGGATCTCAGAGGTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: GRLGSWRPGQGRSVP*VWSVRSREGSQRWY Trigger: ATACCACCTCTGAGATCCTTCTCTGCTCCTCACTGACCAAACTCAAGGAACAGATCTTCCCTGCCCAGGTCTCCAGGACCCCAACCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | TGTTTCTTCATAGGTCTGCTCAGAGGGCTGTGCCCAAGCAGTCAGTaGGGCTCCTGGGATGTTTCTGGCTTCCCATACATGAGAGGCGTC | + |
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Preference number: 5 (lower is better) Translates to: CFFIGLLRGLCPSSQ*GSWDVSGFPYMRGV Trigger: GACGCCTCTCATGTATGGGAAGCCAGAAACATCCCAGGAGCCTCACTGACTGCTTGGGCACAGCCCTCTGAGCAGACCTATGAAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | GCCTGTCGAGGTTTAGTAGCTTACTTCGGGTTCCATCACTGGTGGTaGTTCCAAAGCCCATGGCCCAGCATTCCCACAGAAGACTTGATT | + |
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Preference number: 5 (lower is better) Translates to: ACRGLVAYFGFHHWW*FQSPWPSIPTEDLI Trigger: AATCAAGTCTTCTGTGGGAATGCTGGGCCATGGGCTTTGGAATCACCACCAGTGATGGAACCCGAAGTAAGCTACTAAACCTCGACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | CTTTCAGGACCACCTGGGGTTCCATCACTGGTGGTGATTCATGAATaGGCCTGTCGAGGTTTAGTAGCTTACTTCGGGTTCCATCACTGG | + |
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Preference number: 5 (lower is better) Translates to: LSGPPGVPSLVVIHE*ACRGLVAYFGFHHW Trigger: CCAGTGATGGAACCCGAAGTAAGCTACTAAACCTCGACAGGCTCATTCATGAATCACCACCAGTGATGGAACCCCAGGTGGTCCTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | CCTCCTTTCAGGACCACCTGGGGTTCCATCACTGGTGGTGATTCATaGATGAGCCTGTCGAGGTTTAGTAGCTTACTTCGGGTTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: PPFRTTWGSITGGDS*MSLSRFSSLLRVPS Trigger: TGATGGAACCCGAAGTAAGCTACTAAACCTCGACAGGCTCATTCATGAATCACCACCAGTGATGGAACCCCAGGTGGTCCTGAAAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | AATGAACCGAGTCCTGGAGTCTGGAAAAGCACTTTATATCCTCAGTaGTCAGGTGAGAAATGGCCAATTGATGGTGCTCTTCTATGTGAC | + |
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Preference number: 5 (lower is better) Translates to: NEPSPGVWKSTLYPQ*SGEKWPIDGALLCD Trigger: GTCACATAGAAGAGCACCATCAATTGGCCATTTCTCACCTGATCACTGAGGATATAAAGTGCTTTTCCAGACTCCAGGACTCGGTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 90 bp | CAATTGATGGTGCTCTTCTATGTGACTCAGAAGTTGATCCATAATTaGCATCTGCGAAAAAGAGAAGCAAAGCACCTCCTCCTTTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QLMVLFYVTQKLIHN*HLRKREAKHLLLSG Trigger: TCCTGAAAGGAGGAGGTGCTTTGCTTCTCTTTTTCGCAGATGTCAATTATGGATCAACTTCTGAGTCACATAGAAGAGCACCATCAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS CCA 72 bp | GTGCCCAAGCAGTCAGTGAGGCTCCTGGGATGTTTCTaGCTTCCCATACATGAGAGGCGTCCTGATACTAGC | + |
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Preference number: 6 (lower is better) Translates to: VPKQSVRLLGCF*LPIHERRPDTS Trigger: GCTAGTATCAGGACGCCTCTCATGTATGGGAAGCCAGAAACATCCCAGGAGCCTCACTGACTGCTTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS CAA 72 bp | GGGGTCCTGGAGACCTGGGCAGGGAAGATCTGTTCCTaGAGTTTGGTCAGTGAGGAGCAGAGAAGGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: GVLETWAGKICS*SLVSEEQRRIS Trigger: TGAGATCCTTCTCTGCTCCTCACTGACCAAACTCAAGGAACAGATCTTCCCTGCCCAGGTCTCCAGGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS CAA 90 bp | GTTGGGGTCCTGGAGACCTGGGCAGGGAAGATCTGTTCCTTGAGTTaGGTCAGTGAGGAGCAGAGAAGGATCTCAGAGGTGGTATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VGVLETWAGKICSLS*VSEEQRRISEVVSD Trigger: ATCAGATACCACCTCTGAGATCCTTCTCTGCTCCTCACTGACCAAACTCAAGGAACAGATCTTCCCTGCCCAGGTCTCCAGGACCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS CAA 72 bp | AAGACCTGTGTGAATTCTCTCCTAGAAGTGGGTAGGTaGGGGTCCTGGAGACCTGGGCAGGGAAGATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KTCVNSLLEVGR*GSWRPGQGRSV Trigger: AACAGATCTTCCCTGCCCAGGTCTCCAGGACCCCAACCTACCCACTTCTAGGAGAGAATTCACACAGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 72 bp | GGTTTAGTAGCTTACTTCGGGTTCCATCACTGGTGGTaGTTCCAAAGCCCATGGCCCAGCATTCCCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLVAYFGFHHWW*FQSPWPSIPTE Trigger: TTCTGTGGGAATGCTGGGCCATGGGCTTTGGAATCACCACCAGTGATGGAACCCGAAGTAAGCTACTAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 72 bp | CCACCTGGGGTTCCATCACTGGTGGTGATTCATGAATaGGCCTGTCGAGGTTTAGTAGCTTACTTCGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PPGVPSLVVIHE*ACRGLVAYFGF Trigger: GAACCCGAAGTAAGCTACTAAACCTCGACAGGCTCATTCATGAATCACCACCAGTGATGGAACCCCAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 72 bp | AGGACCACCTGGGGTTCCATCACTGGTGGTGATTCATaGATGAGCCTGTCGAGGTTTAGTAGCTTACTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RTTWGSITGGDS*MSLSRFSSLLR Trigger: CCGAAGTAAGCTACTAAACCTCGACAGGCTCATTCATGAATCACCACCAGTGATGGAACCCCAGGTGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS CAA 90 bp | GTGATTCCAAAGCCCATGGCCCAGCATTCCCACAGAAGACTTGATTaGTTTGTAGTCTCTATTCCTCAAGACCTGTGTGAATTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VIPKPMAQHSHRRLD*FVVSIPQDLCEFSP Trigger: AGGAGAGAATTCACACAGGTCTTGAGGAATAGAGACTACAAACAAATCAAGTCTTCTGTGGGAATGCTGGGCCATGGGCTTTGGAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS CAA 72 bp | AAGCCCATGGCCCAGCATTCCCACAGAAGACTTGATTaGTTTGTAGTCTCTATTCCTCAAGACCTGTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KPMAQHSHRRLD*FVVSIPQDLCE Trigger: TTCACACAGGTCTTGAGGAATAGAGACTACAAACAAATCAAGTCTTCTGTGGGAATGCTGGGCCATGGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 72 bp | AGTCCTGGAGTCTGGAAAAGCACTTTATATCCTCAGTaGTCAGGTGAGAAATGGCCAATTGATGGTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPGVWKSTLYPQ*SGEKWPIDGAL Trigger: AAGAGCACCATCAATTGGCCATTTCTCACCTGATCACTGAGGATATAAAGTGCTTTTCCAGACTCCAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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| CDS TCA 72 bp | GTGCTCTTCTATGTGACTCAGAAGTTGATCCATAATTaGCATCTGCGAAAAAGAGAAGCAAAGCACCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLFYVTQKLIHN*HLRKREAKHLL Trigger: GAGGAGGTGCTTTGCTTCTCTTTTTCGCAGATGTCAATTATGGATCAACTTCTGAGTCACATAGAAGAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556762.1 |
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