Pregenerated sensors for LINC02296 (Homo sapiens)
Ensembl gene IDs: ENSG00000258859Ensembl transcript IDs: ENST00000557070.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTTGGACTGAAATGGCCCTGCTGCTGTGTTACCCAGATCCTAACTaGCCATGGGCTGGTACCGGTCCACTGCCAGGGGTTGCGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWTEMALLLCYPDPN*PWAGTGPLPGVADP Trigger: GGGGTCCGCAACCCCTGGCAGTGGACCGGTACCAGCCCATGGCCAGTTAGGATCTGGGTAACACAGCAGCAGGGCCATTTCAGTCCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS GCA 90 bp | GGTCACCTATGCGTCCCATTCCTCCTTGGACTGAAATGGCCCTGCTaGTGTGTTACCCAGATCCTAACTGGCCATGGGCTGGTACCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GHLCVPFLLGLKWPC*CVTQILTGHGLVPV Trigger: GACCGGTACCAGCCCATGGCCAGTTAGGATCTGGGTAACACAGCAGCAGGGCCATTTCAGTCCAAGGAGGAATGGGACGCATAGGTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS GCA 90 bp | AAGTTTCAGGTGAGCACGCAGCTGGGCTGGTTTCATTTACTGCTGTaGAGATTTGAATCTTGGTTCTGCTGTGTCCAGCTGTGTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: KFQVSTQLGWFHLLL*RFESWFCCVQLCDL Trigger: AAGGTCACACAGCTGGACACAGCAGAACCAAGATTCAAATCTGCACAGCAGTAAATGAAACCAGCCCAGCTGCGTGCTCACCTGAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS CCA 90 bp | GAACGTGAAGGAGAAAATAAGTTTCAGGTGAGCACGCAGCTGGGCTaGTTTCATTTACTGCTGTGCAGATTTGAATCTTGGTTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EREGENKFQVSTQLG*FHLLLCRFESWFCC Trigger: ACAGCAGAACCAAGATTCAAATCTGCACAGCAGTAAATGAAACCAGCCCAGCTGCGTGCTCACCTGAAACTTATTTTCTCCTTCACGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS CCA 72 bp | GCCCTGCTGCTGTGTTACCCAGATCCTAACTGGCCATaGGCTGGTACCGGTCCACTGCCAGGGGTTGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALLLCYPDPNWP*AGTGPLPGVAD Trigger: GTCCGCAACCCCTGGCAGTGGACCGGTACCAGCCCATGGCCAGTTAGGATCTGGGTAACACAGCAGCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS GCA 72 bp | TGCGTCCCATTCCTCCTTGGACTGAAATGGCCCTGCTaGTGTGTTACCCAGATCCTAACTGGCCATGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CVPFLLGLKWPC*CVTQILTGHGL Trigger: CAGCCCATGGCCAGTTAGGATCTGGGTAACACAGCAGCAGGGCCATTTCAGTCCAAGGAGGAATGGGACGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS GCA 72 bp | CTATGCGTCCCATTCCTCCTTGGACTGAAATGGCCCTaGTGCTGTGTTACCCAGATCCTAACTGGCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LCVPFLLGLKWP*CCVTQILTGHG Trigger: CCCATGGCCAGTTAGGATCTGGGTAACACAGCAGCAGGGCCATTTCAGTCCAAGGAGGAATGGGACGCATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS CCA 72 bp | GGTCACCTATGCGTCCCATTCCTCCTTGGACTGAAATaGCCCTGCTGCTGTGTTACCCAGATCCTAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHLCVPFLLGLK*PCCCVTQILTG Trigger: GCCAGTTAGGATCTGGGTAACACAGCAGCAGGGCCATTTCAGTCCAAGGAGGAATGGGACGCATAGGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS GCA 72 bp | GTGAGCACGCAGCTGGGCTGGTTTCATTTACTGCTGTaGAGATTTGAATCTTGGTTCTGCTGTGTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSTQLGWFHLLL*RFESWFCCVQL Trigger: CAGCTGGACACAGCAGAACCAAGATTCAAATCTGCACAGCAGTAAATGAAACCAGCCCAGCTGCGTGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS CCA 72 bp | GGCTGGTTTCATTTACTGCTGTGCAGATTTGAATCTTaGTTCTGCTGTGTCCAGCTGTGTGACCTTTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GWFHLLLCRFES*FCCVQLCDLWH Trigger: ATGCCAAAGGTCACACAGCTGGACACAGCAGAACCAAGATTCAAATCTGCACAGCAGTAAATGAAACCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS CCA 72 bp | GGAGAAAATAAGTTTCAGGTGAGCACGCAGCTGGGCTaGTTTCATTTACTGCTGTGCAGATTTGAATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GENKFQVSTQLG*FHLLLCRFESW Trigger: CCAAGATTCAAATCTGCACAGCAGTAAATGAAACCAGCCCAGCTGCGTGCTCACCTGAAACTTATTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||
| CDS GCA 72 bp | TTTCATTTACTGCTGTGCAGATTTGAATCTTGGTTCTaGTGTGTCCAGCTGTGTGACCTTTGGCATGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: FHLLLCRFESWF*CVQLCDLWHVT Trigger: TGTAACATGCCAAAGGTCACACAGCTGGACACAGCAGAACCAAGATTCAAATCTGCACAGCAGTAAATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557070.1 |
||