Pregenerated sensors for LINC02291 (Homo sapiens)
Ensembl gene IDs: ENSG00000197176Ensembl transcript IDs: ENST00000355909.7, ENST00000554197.1, ENST00000556163.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAGGTGGCTGCCCCACCACTGTCTCAGTGGCTTAGTCACGGAGGCTaGGAAGTCCAAGGTCAGAGGGCCATATCTGCTCAGGGCCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: KVAAPPLSQWLSHGG*EVQGQRAISAQGLL Trigger: AAGAAGGCCCTGAGCAGATATGGCCCTCTGACCTTGGACTTCTCAGCCTCCGTGACTAAGCCACTGAGACAGTGGTGGGGCAGCCACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000554197.1 |
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| CDS TCA 90 bp | GCTGAGAAGCCCGAGGAACCCTGCCTACGGAGGCCTCCTGGTGCCTaGAGTCTGGTTGCAGAATGTTCTAGAACTGTACACCTCTTTAGT | + |
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Preference number: 5 (lower is better) Translates to: AEKPEEPCLRRPPGA*SLVAECSRTVHLFS Trigger: ACTAAAGAGGTGTACAGTTCTAGAACATTCTGCAACCAGACTTCAGGCACCAGGAGGCCTCCGTAGGCAGGGTTCCTCGGGCTTCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS CCA 90 bp | AGCCCGAGGAACCCTGCCTACGGAGGCCTCCTGGTGCCTGAAGTCTaGTTGCAGAATGTTCTAGAACTGTACACCTCTTTAGTTATTGTC | + |
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Preference number: 5 (lower is better) Translates to: SPRNPAYGGLLVPEV*LQNVLELYTSLVIV Trigger: GACAATAACTAAAGAGGTGTACAGTTCTAGAACATTCTGCAACCAGACTTCAGGCACCAGGAGGCCTCCGTAGGCAGGGTTCCTCGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS GCA 90 bp | ACTGTACACCTCTTTAGTTATTGTCGAATAGATTCTCTATCTGTGTaGTGGGGACTGGGAATAGCTCCATCTGGTTGTCCAGTCAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: TVHLFSYCRIDSLSV*WGLGIAPSGCPVSA Trigger: TGCACTGACTGGACAACCAGATGGAGCTATTCCCAGTCCCCAGCACACAGATAGAGAATCTATTCGACAATAACTAAAGAGGTGTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS GCA 90 bp | TGTGTGCTGGGGACTGGGAATAGCTCCATCTGGTTGTCCAGTCAGTaGAATAACAACACTCCATATTCAAAGCTTCCTTTCCATCATTTT | + |
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Preference number: 5 (lower is better) Translates to: CVLGTGNSSIWLSSQ*NNNTPYSKLPFHHF Trigger: AAAATGATGGAAAGGAAGCTTTGAATATGGAGTGTTGTTATTGCACTGACTGGACAACCAGATGGAGCTATTCCCAGTCCCCAGCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS CCA 90 bp | GTACACCTCTTTAGTTATTGTCGAATAGATTCTCTATCTGTGTGCTaGGGACTGGGAATAGCTCCATCTGGTTGTCCAGTCAGTGCAATA | + |
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Preference number: 5 (lower is better) Translates to: VHLFSYCRIDSLSVC*GLGIAPSGCPVSAI Trigger: TATTGCACTGACTGGACAACCAGATGGAGCTATTCCCAGTCCCCAGCACACAGATAGAGAATCTATTCGACAATAACTAAAGAGGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS TCA 72 bp | GCCCCACCACTGTCTCAGTGGCTTAGTCACGGAGGCTaGGAAGTCCAAGGTCAGAGGGCCATATCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: APPLSQWLSHGG*EVQGQRAISAQ Trigger: CTGAGCAGATATGGCCCTCTGACCTTGGACTTCTCAGCCTCCGTGACTAAGCCACTGAGACAGTGGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000554197.1 |
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| CDS GCA 72 bp | CGGAGGCTGAGAAGTCCAAGGTCAGAGGGCCATATCTaGTCAGGGCCTTCTTGCTGCTGGGAACTCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RRLRSPRSEGHI*SGPSCCWELCR Trigger: TCTACAGAGTTCCCAGCAGCAAGAAGGCCCTGAGCAGATATGGCCCTCTGACCTTGGACTTCTCAGCCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355909.7 ENST00000554197.1 ENST00000556163.1 |
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| CDS CAA 90 bp | CCGAGGAACCCTGCCTACGGAGGCCTCCTGGTGCCTGAAGTCTGGTaGCAGAATGTTCTAGAACTGTACACCTCTTTAGTTATTGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PRNPAYGGLLVPEVW*QNVLELYTSLVIVE Trigger: TTCGACAATAACTAAAGAGGTGTACAGTTCTAGAACATTCTGCAACCAGACTTCAGGCACCAGGAGGCCTCCGTAGGCAGGGTTCCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS CAA 72 bp | TCACTGAGACCAATCCTTCTGCCCTGGTTGAAAGGCTaGCCCCTATATATCTCTGGAGAGTCAGAAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLRPILLPWLKG*PLYISGESEGG Trigger: TCCTCCTTCTGACTCTCCAGAGATATATAGGGGCAAGCCTTTCAACCAGGGCAGAAGGATTGGTCTCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556163.1 |
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| CDS TCA 72 bp | AATGTTGACTTCTCCTTCTTCATTAGTCACGGAGGCTaGGAAGTCCAAGGTCAGAGGGCCATATCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: NVDFSFFISHGG*EVQGQRAISAQ Trigger: CTGAGCAGATATGGCCCTCTGACCTTGGACTTCTCAGCCTCCGTGACTAATGAAGAAGGAGAAGTCAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556163.1 |
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| CDS CAA 90 bp | TCTGCAAAATCACTGAGACCAATCCTTCTGCCCTGGTTGAAAGGCTaGCCCCTATATATCTCTGGAGAGTCAGAAGGAGGAATCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SAKSLRPILLPWLKG*PLYISGESEGGIQA Trigger: AGCTTGGATTCCTCCTTCTGACTCTCCAGAGATATATAGGGGCAAGCCTTTCAACCAGGGCAGAAGGATTGGTCTCAGTGATTTTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556163.1 |
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| CDS CAA 72 bp | TCTGCAAAATCACTGAGACCAATCCTTCTGCCCTGGTaGAAAGGCTTGCCCCTATATATCTCTGGAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SAKSLRPILLPW*KGLPLYISGES Trigger: TGACTCTCCAGAGATATATAGGGGCAAGCCTTTCAACCAGGGCAGAAGGATTGGTCTCAGTGATTTTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556163.1 |
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| CDS CAA 90 bp | AGATTCTCTATCTGTGTGCTGGGGACTGGGAATAGCTCCATCTGGTaGTCCAGTCAGTGCAATAACAACACTCCATATTCAAAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RFSICVLGTGNSSIW*SSQCNNNTPYSKLP Trigger: AGGAAGCTTTGAATATGGAGTGTTGTTATTGCACTGACTGGACAACCAGATGGAGCTATTCCCAGTCCCCAGCACACAGATAGAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS CAA 90 bp | TTGCCCCTATATATCTCTGGAGAGTCAGAAGGAGGAATCCAAGCTTaGGTGGTCTCTCTGGCACAGCATTTGCATATGCTAAGTGTATCA | + |
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Preference number: 6 (lower is better) Translates to: LPLYISGESEGGIQA*VVSLAQHLHMLSVS Trigger: TGATACACTTAGCATATGCAAATGCTGTGCCAGAGAGACCACCAAAGCTTGGATTCCTCCTTCTGACTCTCCAGAGATATATAGGGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556163.1 |
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| CDS GCA 72 bp | GGGACTGGGAATAGCTCCATCTGGTTGTCCAGTCAGTaGAATAACAACACTCCATATTCAAAGCTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GTGNSSIWLSSQ*NNNTPYSKLPF Trigger: GAAAGGAAGCTTTGAATATGGAGTGTTGTTATTGCACTGACTGGACAACCAGATGGAGCTATTCCCAGTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS GCA 72 bp | CTCTTTAGTTATTGTCGAATAGATTCTCTATCTGTGTaGTGGGGACTGGGAATAGCTCCATCTGGTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LFSYCRIDSLSV*WGLGIAPSGCP Trigger: TGGACAACCAGATGGAGCTATTCCCAGTCCCCAGCACACAGATAGAGAATCTATTCGACAATAACTAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS CCA 72 bp | TTTAGTTATTGTCGAATAGATTCTCTATCTGTGTGCTaGGGACTGGGAATAGCTCCATCTGGTTGTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FSYCRIDSLSVC*GLGIAPSGCPV Trigger: GACTGGACAACCAGATGGAGCTATTCCCAGTCCCCAGCACACAGATAGAGAATCTATTCGACAATAACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000355909.7 ENST00000556163.1 |
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| CDS CCA 72 bp | GGAAGAGAACATATTGAACTGCATTCACTTATGGTCTaGGTGCTTGGAAGAAATCAGCTGGTGAGTACCAAA | + |
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Preference number: 6 (lower is better) Translates to: GREHIELHSLMV*VLGRNQLVSTK Trigger: TTTGGTACTCACCAGCTGATTTCTTCCAAGCACCCAGACCATAAGTGAATGCAGTTCAATATGTTCTCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355909.7 |
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| CDS CCA 72 bp | TTTTCTGCTTGTAATCTTCGAGTTTCCGGAGACTCCTaGTCCATGGTAAACACTTCCCAAATGTTGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSACNLRVSGDS*SMVNTSQMLTS Trigger: AGAAGTCAACATTTGGGAAGTGTTTACCATGGACCAGGAGTCTCCGGAAACTCGAAGATTACAAGCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556163.1 |
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