Pregenerated sensors for LINC02264 (Homo sapiens)
Ensembl gene IDs: ENSG00000229565Ensembl transcript IDs: ENST00000442020.1, ENST00000655867.1, ENST00000658473.1, ENST00000663617.1, ENST00000668180.1, ENST00000669974.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCGATTCCAAGCTTCAGGCTGTGGCCCTAGAAAGAAAAACTCCATaGCATAAACAGGCCCAGGGAACTCAAAGGTTGTCCACAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: LDSKLQAVALERKTP*HKQAQGTQRLSTAG Trigger: TCCTGCTGTGGACAACCTTTGAGTTCCCTGGGCCTGTTTATGCCATGGAGTTTTTCTTTCTAGGGCCACAGCCTGAAGCTTGGAATCGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 |
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| CDS GCA 90 bp | TTCAGTCCCAAACTCGATTCCAAGCTTCAGGCTGTGGCCCTGCTTTaGTTTCTCTCTTCATCACACCCTGTGTTTTTGCTGAAAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: FSPKLDSKLQAVALL*FLSSSHPVFLLKEG Trigger: TCCTTCTTTCAGCAAAAACACAGGGTGTGATGAAGAGAGAAAGCAAAGCAGGGCCACAGCCTGAAGCTTGGAATCGAGTTTGGGACTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668180.1 |
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| CDS TCA 90 bp | ATGTCAATAAAGATTTCAGCAGATAAGGACTTTTGCTTCTGTCGATaGTGGTACTCTTTTCAGTCCCAAACTCGATTCCAAGCTTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: MSIKISADKDFCFCR*WYSFQSQTRFQASG Trigger: GCCTGAAGCTTGGAATCGAGTTTGGGACTGAAAAGAGTACCATCATCGACAGAAGCAAAAGTCCTTATCTGCTGAAATCTTTATTGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658473.1 |
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| CDS GCA 90 bp | TTTGAGAACAAATACTGGGCTGAATGGGACTTCTGGTTTGTATATTaGACCTTATTTGGTGGCTCAAGATGTCTTTTTGTGACACCACTC | + |
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Preference number: 5 (lower is better) Translates to: FENKYWAEWDFWFVY*TLFGGSRCLFVTPL Trigger: GAGTGGTGTCACAAAAAGACATCTTGAGCCACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS CCA 90 bp | TTGTCCACAGCATTTATGACATTTGAGAACAAATACTGGGCTGAATaGGACTTCTGGTTTGTATATTGCACCTTATTTGGTGGCTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LSTAFMTFENKYWAE*DFWFVYCTLFGGSR Trigger: TCTTGAGCCACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAAATGTCATAAATGCTGTGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS CCA 90 bp | GCATTTATGACATTTGAGAACAAATACTGGGCTGAATGGGACTTCTaGTTTGTATATTGCACCTTATTTGGTGGCTCAAGATGTCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: AFMTFENKYWAEWDF*FVYCTLFGGSRCLF Trigger: AAAAAGACATCTTGAGCCACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAAATGTCATAAATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS CCA 90 bp | CAAAGTTTCTTGTCCACAGCATTTATGACATTTGAGAACAAATACTaGGCTGAATGGGACTTCTGGTTTGTATATTGCACCTTATTTGGT | + |
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Preference number: 5 (lower is better) Translates to: QSFLSTAFMTFENKY*AEWDFWFVYCTLFG Trigger: ACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAAATGTCATAAATGCTGTGGACAAGAAACTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655867.1 ENST00000658473.1 |
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| CDS CAA 72 bp | TTGAGAACAAATACTGGGCTGAATGGGACTTCTGGTTaGTATATTGCACCTTATTTGGTGGCTCAAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: LRTNTGLNGTSG*YIAPYLVAQDV Trigger: GACATCTTGAGCCACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS GCA 72 bp | AAATACTGGGCTGAATGGGACTTCTGGTTTGTATATTaGACCTTATTTGGTGGCTCAAGATGTCTTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: KYWAEWDFWFVY*TLFGGSRCLFV Trigger: CACAAAAAGACATCTTGAGCCACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS CCA 72 bp | ACATTTGAGAACAAATACTGGGCTGAATGGGACTTCTaGTTTGTATATTGCACCTTATTTGGTGGCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: TFENKYWAEWDF*FVYCTLFGGSR Trigger: TCTTGAGCCACCAAATAAGGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS CCA 72 bp | TTGTCCACAGCATTTATGACATTTGAGAACAAATACTaGGCTGAATGGGACTTCTGGTTTGTATATTGCACC | + |
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Preference number: 6 (lower is better) Translates to: LSTAFMTFENKY*AEWDFWFVYCT Trigger: GGTGCAATATACAAACCAGAAGTCCCATTCAGCCCAGTATTTGTTCTCAAATGTCATAAATGCTGTGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442020.1 ENST00000655867.1 ENST00000658473.1 ENST00000663617.1 ENST00000668180.1 ENST00000669974.1 |
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| CDS TCA 72 bp | AGTCACAGGAACTGGTATATCTCTACAGATTCCTCATaGAACATTCAGACATATCTTTTCAGTCCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: SHRNWYISTDSS*NIQTYLFSPKL Trigger: GAGTTTGGGACTGAAAAGATATGTCTGAATGTTTCATGAGGAATCTGTAGAGATATACCAGTTCCTGTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663617.1 |
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