Pregenerated sensors for LINC02209 (Homo sapiens)
Ensembl gene IDs: ENSG00000253279Ensembl transcript IDs: ENST00000521245.2, ENST00000524059.5, ENST00000657328.1, ENST00000665556.1, ENST00000670557.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTTACTATGCCCTCTAACATCCCACCCTGGGCTTCTCTGCCATTaGAGTCTGGGTGCCAGGTGCCTGGAAACCCACCAGGGCTCACAT | + |
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Preference number: 5 (lower is better) Translates to: PLLCPLTSHPGLLCH*SLGARCLETHQGSH Trigger: ATGTGAGCCCTGGTGGGTTTCCAGGCACCTGGCACCCAGACTGCAATGGCAGAGAAGCCCAGGGTGGGATGTTAGAGGGCATAGTAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CCA 90 bp | CCTCCAGCATGGGCTGACCCTTGCCTGATGCCAGTGCCATGTTCTTaGATTTCCCAGCCTCCAGATCTGTGGTTCGGCCTGTGGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PPAWADPCLMPVPCS*ISQPPDLWFGLWLW Trigger: CCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGAAATCCAAGAACATGGCACTGGCATCAGGCAAGGGTCAGCCCATGCTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 90 bp | CTGCAGATGCCTCTGACCCTTACTATGCCCTCTAACATCCCACCCTaGGCTTCTCTGCCATTGCAGTCTGGGTGCCAGGTGCCTGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LQMPLTLTMPSNIPP*ASLPLQSGCQVPGN Trigger: GTTTCCAGGCACCTGGCACCCAGACTGCAATGGCAGAGAAGCCCAGGGTGGGATGTTAGAGGGCATAGTAAGGGTCAGAGGCATCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CCA 90 bp | TCTTGGATTTCCCAGCCTCCAGATCTGTGGTTCGGCCTGTGGTTGTaGCATTCTGGGTTGACCAGGAGATGTGAGGCTGAGAGATGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SWISQPPDLWFGLWL*HSGLTRRCEAERCS Trigger: TGAGCATCTCTCAGCCTCACATCTCCTGGTCAACCCAGAATGCCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGAAATCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 90 bp | CCATGTTCTTGGATTTCCCAGCCTCCAGATCTGTGGTTCGGCCTGTaGTTGTGGCATTCTGGGTTGACCAGGAGATGTGAGGCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PCSWISQPPDLWFGL*LWHSGLTRRCEAER Trigger: TCTCTCAGCCTCACATCTCCTGGTCAACCCAGAATGCCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGAAATCCAAGAACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 90 bp | CTGATGCCAGTGCCATGTTCTTGGATTTCCCAGCCTCCAGATCTGTaGTTCGGCCTGTGGTTGTGGCATTCTGGGTTGACCAGGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: LMPVPCSWISQPPDL*FGLWLWHSGLTRRC Trigger: ACATCTCCTGGTCAACCCAGAATGCCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGAAATCCAAGAACATGGCACTGGCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 90 bp | CCTCCAGCATGGGCTGACCCTTGCCTGATGCCAGTGCCATGTTCTTaGATTTCCCAGCCTCCAGATTTGTCCACAGGAGTCAAAATGTGC | + |
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Preference number: 5 (lower is better) Translates to: PPAWADPCLMPVPCS*ISQPPDLSTGVKMC Trigger: GCACATTTTGACTCCTGTGGACAAATCTGGAGGCTGGGAAATCCAAGAACATGGCACTGGCATCAGGCAAGGGTCAGCCCATGCTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657328.1 ENST00000670557.1 |
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| CDS CCA 90 bp | GCCTTTGAAGTCAAAGGTCTTCTCCCACGTGGGCTACAGAATTGTTaGTGTGGGGATGCCTGTGAGGGCTCTGACATTGCCGGTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: AFEVKGLLPRGLQNC*CGDACEGSDIAGPD Trigger: ATCTGGACCGGCAATGTCAGAGCCCTCACAGGCATCCCCACACCAACAATTCTGTAGCCCACGTGGGAGAAGACCTTTGACTTCAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670557.1 |
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| CDS TCA 90 bp | ATGACAAGATGCTGCGGATCATCAGTTCCTTCCTGCAGATGCCTCTaGCCCTTACTATGCCCTCTAACATCCCACCCTGGGCTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: MTRCCGSSVPSCRCL*PLLCPLTSHPGLLC Trigger: GCAGAGAAGCCCAGGGTGGGATGTTAGAGGGCATAGTAAGGGTCAGAGGCATCTGCAGGAAGGAACTGATGATCCGCAGCATCTTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS GCA 90 bp | TCTTGGATTTCCCAGCCTCCAGATTTGTCCACAGGAGTCAAAATGTaGCCCAGGCCTATTCAGCATTTATCTCACACACCCACTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SWISQPPDLSTGVKM*PRPIQHLSHTPTPC Trigger: GCAAGGAGTGGGTGTGTGAGATAAATGCTGAATAGGCCTGGGGCACATTTTGACTCCTGTGGACAAATCTGGAGGCTGGGAAATCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670557.1 |
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| CDS TCA 90 bp | TCTCTCCAAGGAGAGGTGCCATATCTGAAGAGGTGCTCTTGCAAATaGTCAGTGTATTTACTCTCCTCCTCACTGGTAAAACCTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SLQGEVPYLKRCSCK*SVYLLSSSLVKPGL Trigger: AAGCCCAGGTTTTACCAGTGAGGAGGAGAGTAAATACACTGATCATTTGCAAGAGCACCTCTTCAGATATGGCACCTCTCCTTGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS GCA 90 bp | TCATTGGGTACCATCATAGACATTCTCTCTGGACGTTTGCTTTCCTaGTCCACAATATATGTTGATGCTCTCTACCGACTGCTATGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SLGTIIDILSGRLLS*STIYVDALYRLLWF Trigger: AAACCATAGCAGTCGGTAGAGAGCATCAACATATATTGTGGAGCAGGAAAGCAAACGTCCAGAGAGAATGTCTATGATGGTACCCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS TCA 90 bp | GTTTCAGACTTCCTGGTGTCTGCAAAGGGAGATTTTTCTTTTGTGTaGGTCTCAACTCAATTGATGCCTCATTCAGAATGGCTCCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: VSDFLVSAKGDFSFV*VSTQLMPHSEWLLL Trigger: TAAGAGGAGCCATTCTGAATGAGGCATCAATTGAGTTGAGACTCACACAAAAGAAAAATCTCCCTTTGCAGACACCAGGAAGTCTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670557.1 |
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| CDS GCA 72 bp | CCTGGGCTTCTCTGCCATTGCAGTCTGGGTGCCAGGTaGCTGGAAACCCACCAGGGCTCACATATGCATAAG | + |
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Preference number: 6 (lower is better) Translates to: PGLLCHCSLGAR*LETHQGSHMHK Trigger: CTTATGCATATGTGAGCCCTGGTGGGTTTCCAGGCACCTGGCACCCAGACTGCAATGGCAGAGAAGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CCA 72 bp | TCCCAGCCTCCAGATCTGTGGTTCGGCCTGTGGTTGTaGCATTCTGGGTTGACCAGGAGATGTGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SQPPDLWFGLWL*HSGLTRRCEAE Trigger: CTCAGCCTCACATCTCCTGGTCAACCCAGAATGCCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 72 bp | GGCTTCTCTGCCATTGCAGTCTGGGTGCCAGGTGCCTaGAAACCCACCAGGGCTCACATATGCATAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GFSAIAVWVPGA*KPTRAHICISW Trigger: CCAGCTTATGCATATGTGAGCCCTGGTGGGTTTCCAGGCACCTGGCACCCAGACTGCAATGGCAGAGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CCA 72 bp | CCTCTGACCCTTACTATGCCCTCTAACATCCCACCCTaGGCTTCTCTGCCATTGCAGTCTGGGTGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PLTLTMPSNIPP*ASLPLQSGCQV Trigger: CACCTGGCACCCAGACTGCAATGGCAGAGAAGCCCAGGGTGGGATGTTAGAGGGCATAGTAAGGGTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS GCA 72 bp | TTACTATGCCCTCTAACATCCCACCCTGGGCTTCTCTaGCATTGCAGTCTGGGTGCCAGGTGCCTGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: LLCPLTSHPGLL*HCSLGARCLET Trigger: GGTTTCCAGGCACCTGGCACCCAGACTGCAATGGCAGAGAAGCCCAGGGTGGGATGTTAGAGGGCATAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CAA 72 bp | GGGATTGCCTCCTCCCTTTGGTGTCCCACTATGGACTaGGCACTGCTTGTCTGGTCTGGCCTCTATCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GIASSLWCPTMD*ALLVWSGLYQC Trigger: GCACTGATAGAGGCCAGACCAGACAAGCAGTGCCAAGTCCATAGTGGGACACCAAAGGGAGGAGGCAATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS TCA 72 bp | TGCTGCGGATCATCAGTTCCTTCCTGCAGATGCCTCTaGCCCTTACTATGCCCTCTAACATCCCACCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CCGSSVPSCRCL*PLLCPLTSHPG Trigger: CCCAGGGTGGGATGTTAGAGGGCATAGTAAGGGTCAGAGGCATCTGCAGGAAGGAACTGATGATCCGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS GCA 72 bp | AGTTGGGGTCTTGCCCTGTTGCTCAGAGTGCAATGGTaGTATCATGGCTCTCTGCGGTCTCAACTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SWGLALLLRVQW*YHGSLRSQLPG Trigger: CCCAGGAAGTTGAGACCGCAGAGAGCCATGATAGCACCATTGCACTCTGAGCAACAGGGCAAGACCCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CCA 72 bp | CATCTGGGATTGCCTCCTCCCTTTGGTGTCCCACTATaGACTTGGCACTGCTTGTCTGGTCTGGCCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: HLGLPPPFGVPL*TWHCLSGLASI Trigger: GATAGAGGCCAGACCAGACAAGCAGTGCCAAGTCCATAGTGGGACACCAAAGGGAGGAGGCAATCCCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 72 bp | GTGCCATGTTCTTGGATTTCCCAGCCTCCAGATCTGTaGTTCGGCCTGTGGTTGTGGCATTCTGGGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: VPCSWISQPPDL*FGLWLWHSGLT Trigger: GGTCAACCCAGAATGCCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGAAATCCAAGAACATGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CCA 72 bp | GTCAAAGGTCTTCTCCCACGTGGGCTACAGAATTGTTaGTGTGGGGATGCCTGTGAGGGCTCTGACATTGCC | + |
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Preference number: 6 (lower is better) Translates to: VKGLLPRGLQNC*CGDACEGSDIA Trigger: GGCAATGTCAGAGCCCTCACAGGCATCCCCACACCAACAATTCTGTAGCCCACGTGGGAGAAGACCTTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670557.1 |
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| CDS CAA 90 bp | TGTTCTTGGATTTCCCAGCCTCCAGATCTGTGGTTCGGCCTGTGGTaGTGGCATTCTGGGTTGACCAGGAGATGTGAGGCTGAGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: CSWISQPPDLWFGLW*WHSGLTRRCEAERC Trigger: GCATCTCTCAGCCTCACATCTCCTGGTCAACCCAGAATGCCACAACCACAGGCCGAACCACAGATCTGGAGGCTGGGAAATCCAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CAA 72 bp | GGACTGAGAAGCCAATTACCCACAGTGGAGGCCAACTaGCCAATGCCCATTTCTAGGGACCCTTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLRSQLPTVEAN*PMPISRDPSSL Trigger: CAAGGAGGAAGGGTCCCTAGAAATGGGCATTGGCAAGTTGGCCTCCACTGTGGGTAATTGGCTTCTCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CAA 90 bp | AGTCCTTCAGGACTGAGAAGCCAATTACCCACAGTGGAGGCCAACTaGCCAATGCCCATTTCTAGGGACCCTTCCTCCTTGCTCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: SPSGLRSQLPTVEAN*PMPISRDPSSLLTC Trigger: GCAAGTGAGCAAGGAGGAAGGGTCCCTAGAAATGGGCATTGGCAAGTTGGCCTCCACTGTGGGTAATTGGCTTCTCAGTCCTGAAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CAA 72 bp | CCAGTGCCATGTTCTTGGATTTCCCAGCCTCCAGATTaGTCCACAGGAGTCAAAATGTGCCCCAGGCCTATT | + |
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Preference number: 6 (lower is better) Translates to: PVPCSWISQPPD*STGVKMCPRPI Trigger: AATAGGCCTGGGGCACATTTTGACTCCTGTGGACAAATCTGGAGGCTGGGAAATCCAAGAACATGGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657328.1 ENST00000670557.1 |
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| CDS CAA 72 bp | ATTGTTGGTGTGGGGATGCCTGTGAGGGCTCTGACATaGCCGGTCCAGATGCTAGAGTTAGCTTTGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: IVGVGMPVRALT*PVQMLELALSK Trigger: TTTGCTCAAAGCTAACTCTAGCATCTGGACCGGCAATGTCAGAGCCCTCACAGGCATCCCCACACCAACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670557.1 |
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| CDS CAA 90 bp | TGCCTGATGCCAGTGCCATGTTCTTGGATTTCCCAGCCTCCAGATTaGTCCACAGGAGTCAAAATGTGCCCCAGGCCTATTCAGCATTTA | + |
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Preference number: 6 (lower is better) Translates to: CLMPVPCSWISQPPD*STGVKMCPRPIQHL Trigger: TAAATGCTGAATAGGCCTGGGGCACATTTTGACTCCTGTGGACAAATCTGGAGGCTGGGAAATCCAAGAACATGGCACTGGCATCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657328.1 ENST00000670557.1 |
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| CDS TCA 72 bp | CCCATTTCTAGGGACCCTTCCTCCTTGCTCACTTGCTaGCACTGTCATTCACATCCTCTCCTTGGAATCATG | + |
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Preference number: 6 (lower is better) Translates to: PISRDPSSLLTC*HCHSHPLLGIM Trigger: CATGATTCCAAGGAGAGGATGTGAATGACAGTGTCAGCAAGTGAGCAAGGAGGAAGGGTCCCTAGAAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CAA 90 bp | GTGAGCCAGGTCTTTACTCTCTCCCTTTTCGACTTAGATCTTTTGTaGTGTAAGTGGTGTGAGCTTCAGCTAGAATGGTCTCCCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSQVFTLSLFDLDLL*CKWCELQLEWSPCL Trigger: AAGACAGGGAGACCATTCTAGCTGAAGCTCACACCACTTACACAACAAAAGATCTAAGTCGAAAAGGGAGAGAGTAAAGACCTGGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS CAA 90 bp | GTCCTAGACTCATTGGGTACCATCATAGACATTCTCTCTGGACGTTaGCTTTCCTGCTCCACAATATATGTTGATGCTCTCTACCGACTG | + |
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Preference number: 6 (lower is better) Translates to: VLDSLGTIIDILSGR*LSCSTIYVDALYRL Trigger: CAGTCGGTAGAGAGCATCAACATATATTGTGGAGCAGGAAAGCAAACGTCCAGAGAGAATGTCTATGATGGTACCCAATGAGTCTAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS TCA 72 bp | GGATTAATGCCATTATTGCTGGAGCGGGTTAGTTATTaGGAGGCTGGGTTTGCTATACAAGCAAGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLMPLLLERVSY*EAGFAIQASSA Trigger: GGCTGAACTTGCTTGTATAGCAAACCCAGCCTCTCAATAACTAACCCGCTCCAGCAATAATGGCATTAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 ENST00000665556.1 ENST00000670557.1 |
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| CDS CAA 72 bp | TCTCCAAGGAGAGGTGCCATATCTGAAGAGGTGCTCTaGCAAATGATCAGTGTATTTACTCTCCTCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: SPRRGAISEEVL*QMISVFTLLLT Trigger: AGTGAGGAGGAGAGTAAATACACTGATCATTTGCAAGAGCACCTCTTCAGATATGGCACCTCTCCTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS GCA 72 bp | ACCATCATAGACATTCTCTCTGGACGTTTGCTTTCCTaGTCCACAATATATGTTGATGCTCTCTACCGACTG | + |
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Preference number: 6 (lower is better) Translates to: TIIDILSGRLLS*STIYVDALYRL Trigger: CAGTCGGTAGAGAGCATCAACATATATTGTGGAGCAGGAAAGCAAACGTCCAGAGAGAATGTCTATGATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS GCA 72 bp | CCTCAGTTGGCTAGGATCTATGCAAACAAATATGCCTaGACACTGTTGTTCCTGGGAGAACAAATTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: PQLARIYANKYA*TLLFLGEQIGT Trigger: TGTACCAATTTGTTCTCCCAGGAACAACAGTGTGCAGGCATATTTGTTTGCATAGATCCTAGCCAACTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665556.1 |
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| CDS CAA 72 bp | AGTGACCATAGCATAAGAATCCTGGTCCTAGACTCATaGGGTACCATCATAGACATTCTCTCTGGACGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SDHSIRILVLDS*GTIIDILSGRL Trigger: CAAACGTCCAGAGAGAATGTCTATGATGGTACCCAATGAGTCTAGGACCAGGATTCTTATGCTATGGTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS CAA 72 bp | ATCATGTATCTCAGGAAAACAATCACACGTAAGTCTTaGCCTCAAGCTCTGCTTTCAGGGACACCCAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: IMYLRKTITRKS*PQALLSGTPKL Trigger: TAGCTTGGGTGTCCCTGAAAGCAGAGCTTGAGGCAAAGACTTACGTGTGATTGTTTTCCTGAGATACATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CAA 72 bp | TCATTGGGTACCATCATAGACATTCTCTCTGGACGTTaGCTTTCCTGCTCCACAATATATGTTGATGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLGTIIDILSGR*LSCSTIYVDAL Trigger: GAGAGCATCAACATATATTGTGGAGCAGGAAAGCAAACGTCCAGAGAGAATGTCTATGATGGTACCCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS CAA 72 bp | TGCTCACTTGCTGACACTGTCATTCACATCCTCTCCTaGGAATCATGTATCTCAGGAAAACAATCACACGTA | + |
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Preference number: 6 (lower is better) Translates to: CSLADTVIHILS*ESCISGKQSHV Trigger: TACGTGTGATTGTTTTCCTGAGATACATGATTCCAAGGAGAGGATGTGAATGACAGTGTCAGCAAGTGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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| CDS CAA 90 bp | AAAAATATGAGTGACCATAGCATAAGAATCCTGGTCCTAGACTCATaGGGTACCATCATAGACATTCTCTCTGGACGTTTGCTTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KNMSDHSIRILVLDS*GTIIDILSGRLLSC Trigger: GCAGGAAAGCAAACGTCCAGAGAGAATGTCTATGATGGTACCCAATGAGTCTAGGACCAGGATTCTTATGCTATGGTCACTCATATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS CAA 72 bp | GTCTTTACTCTCTCCCTTTTCGACTTAGATCTTTTGTaGTGTAAGTGGTGTGAGCTTCAGCTAGAATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VFTLSLFDLDLL*CKWCELQLEWS Trigger: AGACCATTCTAGCTGAAGCTCACACCACTTACACAACAAAAGATCTAAGTCGAAAAGGGAGAGAGTAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000665556.1 |
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| CDS TCA 72 bp | ATTCTGAAGATCCAGAAGGTGGAAGCTGCTTGCTGGTaGTGTGAAGGACATTCATTTGATGAAACTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: ILKIQKVEAACW*CEGHSFDETQK Trigger: TTTTTGAGTTTCATCAAATGAATGTCCTTCACATCACCAGCAAGCAGCTTCCACCTTCTGGATCTTCAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521245.2 ENST00000524059.5 ENST00000657328.1 |
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| CDS TCA 72 bp | AGGGAGATTTTTCTTTTGTGTGAGTCTCAACTCAATTaGTGCCTCATTCAGAATGGCTCCTCTTATCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: REIFLLCESQLN*CLIQNGSSYLK Trigger: TTTGAGATAAGAGGAGCCATTCTGAATGAGGCATCAATTGAGTTGAGACTCACACAAAAGAAAAATCTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670557.1 |
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| CDS CCA 72 bp | GTGGCAGTGTACCCTCATGATGGTATGTTAATACAATaGCTTATAGCTATTAAAATGGGCCACACATATTGT | + |
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Preference number: 6 (lower is better) Translates to: VAVYPHDGMLIQ*LIAIKMGHTYC Trigger: ACAATATGTGTGGCCCATTTTAATAGCTATAAGCCATTGTATTAACATACCATCATGAGGGTACACTGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665556.1 |
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| CDS CCA 72 bp | TCTATGCAAACAAATATGCCTGCACACTGTTGTTCCTaGGAGAACAAATTGGTACAAGTGTTTGAAGATCAA | + |
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Preference number: 6 (lower is better) Translates to: SMQTNMPAHCCS*ENKLVQVFEDQ Trigger: TTGATCTTCAAACACTTGTACCAATTTGTTCTCCCAGGAACAACAGTGTGCAGGCATATTTGTTTGCATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665556.1 |
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| CDS CAA 90 bp | ATGTTTCTTCCTCTATTCACAGTTCTAAAACATATTTCATATGGCTaGTCAAATAGTCCTTCAGGACTGAGAAGCCAATTACCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: MFLPLFTVLKHISYG*SNSPSGLRSQLPTV Trigger: CACTGTGGGTAATTGGCTTCTCAGTCCTGAAGGACTATTTGACAAGCCATATGAAATATGTTTTAGAACTGTGAATAGAGGAAGAAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521245.2 |
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