Pregenerated sensors for LINC02202 (Homo sapiens)
Ensembl gene IDs: ENSG00000245812Ensembl transcript IDs: ENST00000499583.1, ENST00000517335.2, ENST00000523301.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GTCCCCGACGTCCCAGAACGGCGGAGCAGGACGCGGCATCAGCCCTaGGAGGGCGCAGCCTGCGAGCCTCCAGCGCGCTCAGGGCGCGGC | + |
Preference number: 5 (lower is better) Translates to: VPDVPERRSRTRHQP*EGAACEPPARSGRG Trigger: GCCGCGCCCTGAGCGCGCTGGAGGCTCGCAGGCTGCGCCCTCCCAGGGCTGATGCCGCGTCCTGCTCCGCCGTTCTGGGACGTCGGGGAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499583.1 ENST00000517335.2 ENST00000523301.1 |
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CDS GCA 90 bp | CCCCAGCCCAGACGTCAGTGCTCAGCGCTCCTTCGCTCGCCACTTTaGGAGGAACTTTGGCCGGCTCCCCTGCGCCACCGGGAGCGGGAT | + |
Preference number: 5 (lower is better) Translates to: PQPRRQCSALLRSPL*EELWPAPLRHRERD Trigger: ATCCCGCTCCCGGTGGCGCAGGGGAGCCGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAGCACTGACGTCTGGGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CCA 90 bp | CCCGCACTCCCAGGACAGCCTCGGAGAGGTGGGGCAGCGCAGTCTTaGTGGGTTTGGCATCTTCACGGCAGCTGGGACGCGCGTCCTGCT | + |
Preference number: 5 (lower is better) Translates to: PALPGQPRRGGAAQS*WVWHLHGSWDARPA Trigger: AGCAGGACGCGCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGGCTGTCCTGGGAGTGCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS GCA 90 bp | TCTCCGTCCTCGCTCGGACCCGCTCCTCCCCAGCCCAGACGTCAGTaGTCAGCGCTCCTTCGCTCGCCACTTTGCGAGGAACTTTGGCCG | + |
Preference number: 5 (lower is better) Translates to: SPSSLGPAPPQPRRQ*SALLRSPLCEELWP Trigger: CGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAGCACTGACGTCTGGGCTGGGGAGGAGCGGGTCCGAGCGAGGACGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CCA 90 bp | GAGGATCGCGAGGTGGCGCTGTGGCTCCACCTTAAGGAAAGATTCTaGAGCTCGCGGGTCACCCGCACTCCCAGGACAGCCTCGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: EDREVALWLHLKERF*SSRVTRTPRTASER Trigger: CCTCTCCGAGGCTGTCCTGGGAGTGCGGGTGACCCGCGAGCTCCAGAATCTTTCCTTAAGGTGGAGCCACAGCGCCACCTCGCGATCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CCA 90 bp | CGTGGCCATGAGGGAGGGAAGCTGGAGGATCGCGAGGTGGCGCTGTaGCTCCACCTTAAGGAAAGATTCTGGAGCTCGCGGGTCACCCGC | + |
Preference number: 5 (lower is better) Translates to: RGHEGGKLEDREVAL*LHLKERFWSSRVTR Trigger: GCGGGTGACCCGCGAGCTCCAGAATCTTTCCTTAAGGTGGAGCCACAGCGCCACCTCGCGATCCTCCAGCTTCCCTCCCTCATGGCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CCA 90 bp | CAGCCTTCCGTGGCCATGAGGGAGGGAAGCTGGAGGATCGCGAGGTaGCGCTGTGGCTCCACCTTAAGGAAAGATTCTGGAGCTCGCGGG | + |
Preference number: 5 (lower is better) Translates to: QPSVAMREGSWRIAR*RCGSTLRKDSGARG Trigger: CCCGCGAGCTCCAGAATCTTTCCTTAAGGTGGAGCCACAGCGCCACCTCGCGATCCTCCAGCTTCCCTCCCTCATGGCCACGGAAGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS GCA 90 bp | GCGAGCCTCCAGCGCGCTCAGGGCGCGGCGAGGATGCTAAAGGACTaGAATGGCCAGGATGCAGATCCCCAGCTCAAATTCCTGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: ASLQRAQGAARMLKD*NGQDADPQLKFLRK Trigger: CTTCCTCAGGAATTTGAGCTGGGGATCTGCATCCTGGCCATTGCAGTCCTTTAGCATCCTCGCCGCGCCCTGAGCGCGCTGGAGGCTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517335.2 ENST00000523301.1 |
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CDS GCA 90 bp | CGCTCAGGGCGCGGCGAGGATGCTAAAGGACTGCAATGGCCAGGATaGAGATCCCCAGCTCAAATTCCTGAGGAAGACACCCGCCTCCCT | + |
Preference number: 5 (lower is better) Translates to: RSGRGEDAKGLQWPG*RSPAQIPEEDTRLP Trigger: AGGGAGGCGGGTGTCTTCCTCAGGAATTTGAGCTGGGGATCTGCATCCTGGCCATTGCAGTCCTTTAGCATCCTCGCCGCGCCCTGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CCA 90 bp | CCTCCAGCGCGCTCAGGGCGCGGCGAGGATGCTAAAGGACTGCAATaGCCAGGATGCAGATCCCCAGCTCAAATTCCTGAGGAAGACACC | + |
Preference number: 5 (lower is better) Translates to: PPARSGRGEDAKGLQ*PGCRSPAQIPEEDT Trigger: GGTGTCTTCCTCAGGAATTTGAGCTGGGGATCTGCATCCTGGCCATTGCAGTCCTTTAGCATCCTCGCCGCGCCCTGAGCGCGCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517335.2 ENST00000523301.1 |
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CDS CCA 90 bp | AATGAAAGTGCATGGAAAACCAGTAAGTGTGGGACCCTGGGGGCTTaGACCAGAAAGGGCCAGCCTTCCGTGGCCATGAGGGAGGGAAGC | + |
Preference number: 5 (lower is better) Translates to: NESAWKTSKCGTLGA*TRKGQPSVAMREGS Trigger: GCTTCCCTCCCTCATGGCCACGGAAGGCTGGCCCTTTCTGGTCCAAGCCCCCAGGGTCCCACACTTACTGGTTTTCCATGCACTTTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS TCA 90 bp | TTCCACATGGTTTCCAACAGCCACAATGAAGCCAGCATTGGGTGCTaGGTGAGTGTCATGTGGGTTTTCCAGGGCCCAGGGCAGCTGTGC | + |
Preference number: 5 (lower is better) Translates to: FHMVSNSHNEASIGC*VSVMWVFQGPGQLC Trigger: GCACAGCTGCCCTGGGCCCTGGAAAACCCACATGACACTCACTCAGCACCCAATGCTGGCTTCATTGTGGCTGTTGGAAACCATGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS TCA 90 bp | GTAGGTAAGATTCTAGAGGCCTCGGAATTCAATGCTGGGGTAGAATaGTGTTTAGGACTCAGGCAGCCCAGATTACTAGTGTTGCCAGCC | + |
Preference number: 5 (lower is better) Translates to: VGKILEASEFNAGVE*CLGLRQPRLLVLPA Trigger: GGCTGGCAACACTAGTAATCTGGGCTGCCTGAGTCCTAAACATCATTCTACCCCAGCATTGAATTCCGAGGCCTCTAGAATCTTACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 90 bp | CTCCAGCCTGCAGATAAATGCGCTGAATCAATTAAGTCAGATGACTaGACCGAACTTCTAGAAGAGGAGCATAGTCCTCAGGTATGGCCA | + |
Preference number: 5 (lower is better) Translates to: LQPADKCAESIKSDD*TELLEEEHSPQVWP Trigger: TGGCCATACCTGAGGACTATGCTCCTCTTCTAGAAGTTCGGTGCAGTCATCTGACTTAATTGATTCAGCGCATTTATCTGCAGGCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 90 bp | ACAAAGAAGTCAAACTCTGTCTCTCCTGATCCCATAACCTCTACATaGTCCACCTTGATTTCCAGAGGCTTGAGACCCCAGATGTCCCTT | + |
Preference number: 5 (lower is better) Translates to: TKKSNSVSPDPITST*STLISRGLRPQMSL Trigger: AAGGGACATCTGGGGTCTCAAGCCTCTGGAAATCAAGGTGGAGCATGTAGAGGTTATGGGATCAGGAGAGACAGAGTTTGACTTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS TCA 90 bp | TGTTTAGGACTCAGGCAGCCCAGATTACTAGTGTTGCCAGCCATATaGTTTTGGAAAAGCTCTTTAATCCCTCTGGGTCTCAGGCTTCCT | + |
Preference number: 5 (lower is better) Translates to: CLGLRQPRLLVLPAI*FWKSSLIPLGLRLP Trigger: AGGAAGCCTGAGACCCAGAGGGATTAAAGAGCTTTTCCAAAATCATATGGCTGGCAACACTAGTAATCTGGGCTGCCTGAGTCCTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 90 bp | CCCTTCTGTAGCTTAATCAAGTCATCTGGGTTGGTTTCTTCACATTaGTTTGGCACATGTACTTATAAATGGATATCTCAAAGGGGAAAC | + |
Preference number: 5 (lower is better) Translates to: PFCSLIKSSGLVSSH*FGTCTYKWISQRGN Trigger: GTTTCCCCTTTGAGATATCCATTTATAAGTACATGTGCCAAAGCAATGTGAAGAAACCAACCCAGATGACTTGATTAAGCTACAGAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS CCA 72 bp | GTCCCAGAACGGCGGAGCAGGACGCGGCATCAGCCCTaGGAGGGCGCAGCCTGCGAGCCTCCAGCGCGCTCA | + |
Preference number: 6 (lower is better) Translates to: VPERRSRTRHQP*EGAACEPPARS Trigger: TGAGCGCGCTGGAGGCTCGCAGGCTGCGCCCTCCCAGGGCTGATGCCGCGTCCTGCTCCGCCGTTCTGGGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499583.1 ENST00000517335.2 ENST00000523301.1 |
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CDS CAA 90 bp | TCCCCAGCCCAGACGTCAGTGCTCAGCGCTCCTTCGCTCGCCACTTaGCGAGGAACTTTGGCCGGCTCCCCTGCGCCACCGGGAGCGGGA | + |
Preference number: 6 (lower is better) Translates to: SPAQTSVLSAPSLAT*RGTLAGSPAPPGAG Trigger: TCCCGCTCCCGGTGGCGCAGGGGAGCCGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAGCACTGACGTCTGGGCTGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CAA 90 bp | ACCCGCACTCCCAGGACAGCCTCGGAGAGGTGGGGCAGCGCAGTCTaGGTGGGTTTGGCATCTTCACGGCAGCTGGGACGCGCGTCCTGC | + |
Preference number: 6 (lower is better) Translates to: TRTPRTASERWGSAV*VGLASSRQLGRASC Trigger: GCAGGACGCGCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGGCTGTCCTGGGAGTGCGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CAA 72 bp | CTCAGCGCTCCTTCGCTCGCCACTTTGCGAGGAACTTaGGCCGGCTCCCCTGCGCCACCGGGAGCGGGATGT | + |
Preference number: 6 (lower is better) Translates to: LSAPSLATLRGT*AGSPAPPGAGC Trigger: ACATCCCGCTCCCGGTGGCGCAGGGGAGCCGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CAA 72 bp | GCCTCGGAGAGGTGGGGCAGCGCAGTCTTGGTGGGTTaGGCATCTTCACGGCAGCTGGGACGCGCGTCCTGC | + |
Preference number: 6 (lower is better) Translates to: ASERWGSAVLVG*ASSRQLGRASC Trigger: GCAGGACGCGCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CAA 90 bp | GCGCGTCCTGCTTTTTCTGCCCGGGCTCTCCCGTCTCCTCCACTTTaGTCCCCGACGTCCCAGAACGGCGGAGCAGGACGCGGCATCAGC | + |
Preference number: 6 (lower is better) Translates to: ARPAFSARALPSPPL*SPTSQNGGAGRGIS Trigger: GCTGATGCCGCGTCCTGCTCCGCCGTTCTGGGACGTCGGGGACAAAAGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGCAGGACGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000499583.1 ENST00000517335.2 ENST00000523301.1 |
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CDS GCA 72 bp | AGACGTCAGTGCTCAGCGCTCCTTCGCTCGCCACTTTaGGAGGAACTTTGGCCGGCTCCCCTGCGCCACCGG | + |
Preference number: 6 (lower is better) Translates to: RRQCSALLRSPL*EELWPAPLRHR Trigger: CCGGTGGCGCAGGGGAGCCGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAGCACTGACGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS GCA 72 bp | TCGCTCGGACCCGCTCCTCCCCAGCCCAGACGTCAGTaGTCAGCGCTCCTTCGCTCGCCACTTTGCGAGGAA | + |
Preference number: 6 (lower is better) Translates to: SLGPAPPQPRRQ*SALLRSPLCEE Trigger: TTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAGCACTGACGTCTGGGCTGGGGAGGAGCGGGTCCGAGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CCA 72 bp | TCAGCGCTCCTTCGCTCGCCACTTTGCGAGGAACTTTaGCCGGCTCCCCTGCGCCACCGGGAGCGGGATGTT | + |
Preference number: 6 (lower is better) Translates to: SALLRSPLCEEL*PAPLRHRERDV Trigger: AACATCCCGCTCCCGGTGGCGCAGGGGAGCCGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CCA 72 bp | CCTCGGAGAGGTGGGGCAGCGCAGTCTTGGTGGGTTTaGCATCTTCACGGCAGCTGGGACGCGCGTCCTGCT | + |
Preference number: 6 (lower is better) Translates to: PRRGGAAQSWWV*HLHGSWDARPA Trigger: AGCAGGACGCGCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CCA 72 bp | GGACAGCCTCGGAGAGGTGGGGCAGCGCAGTCTTGGTaGGTTTGGCATCTTCACGGCAGCTGGGACGCGCGT | + |
Preference number: 6 (lower is better) Translates to: GQPRRGGAAQSW*VWHLHGSWDAR Trigger: ACGCGCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGGCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CCA 72 bp | CCAGGACAGCCTCGGAGAGGTGGGGCAGCGCAGTCTTaGTGGGTTTGGCATCTTCACGGCAGCTGGGACGCG | + |
Preference number: 6 (lower is better) Translates to: PGQPRRGGAAQS*WVWHLHGSWDA Trigger: CGCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGGCTGTCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CAA 72 bp | CAGACGTCAGTGCTCAGCGCTCCTTCGCTCGCCACTTaGCGAGGAACTTTGGCCGGCTCCCCTGCGCCACCG | + |
Preference number: 6 (lower is better) Translates to: QTSVLSAPSLAT*RGTLAGSPAPP Trigger: CGGTGGCGCAGGGGAGCCGGCCAAAGTTCCTCGCAAAGTGGCGAGCGAAGGAGCGCTGAGCACTGACGTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CAA 72 bp | CCCAGGACAGCCTCGGAGAGGTGGGGCAGCGCAGTCTaGGTGGGTTTGGCATCTTCACGGCAGCTGGGACGC | + |
Preference number: 6 (lower is better) Translates to: PRTASERWGSAV*VGLASSRQLGR Trigger: GCGTCCCAGCTGCCGTGAAGATGCCAAACCCACCAAGACTGCGCTGCCCCACCTCTCCGAGGCTGTCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CAA 72 bp | GCTTTTTCTGCCCGGGCTCTCCCGTCTCCTCCACTTTaGTCCCCGACGTCCCAGAACGGCGGAGCAGGACGC | + |
Preference number: 6 (lower is better) Translates to: AFSARALPSPPL*SPTSQNGGAGR Trigger: GCGTCCTGCTCCGCCGTTCTGGGACGTCGGGGACAAAAGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000499583.1 ENST00000517335.2 ENST00000523301.1 |
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CDS GCA 72 bp | GGTTTGGCATCTTCACGGCAGCTGGGACGCGCGTCCTaGTTTTTCTGCCCGGGCTCTCCCGTCTCCTCCACT | + |
Preference number: 6 (lower is better) Translates to: GLASSRQLGRAS*FFCPGSPVSST Trigger: AGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGCAGGACGCGCGTCCCAGCTGCCGTGAAGATGCCAAACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CCA 72 bp | GAGGTGGCGCTGTGGCTCCACCTTAAGGAAAGATTCTaGAGCTCGCGGGTCACCCGCACTCCCAGGACAGCC | + |
Preference number: 6 (lower is better) Translates to: EVALWLHLKERF*SSRVTRTPRTA Trigger: GGCTGTCCTGGGAGTGCGGGTGACCCGCGAGCTCCAGAATCTTTCCTTAAGGTGGAGCCACAGCGCCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS GCA 72 bp | CAGCGCGCTCAGGGCGCGGCGAGGATGCTAAAGGACTaGAATGGCCAGGATGCAGATCCCCAGCTCAAATTC | + |
Preference number: 6 (lower is better) Translates to: QRAQGAARMLKD*NGQDADPQLKF Trigger: GAATTTGAGCTGGGGATCTGCATCCTGGCCATTGCAGTCCTTTAGCATCCTCGCCGCGCCCTGAGCGCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517335.2 ENST00000523301.1 |
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CDS GCA 72 bp | ATGTCTGCAACAGAAAGCATCCTGGGACGCGCGTCCTaGTTTTTCTGCCCGGGCTCTCCCGTCTCCTCCACT | + |
Preference number: 6 (lower is better) Translates to: MSATESILGRAS*FFCPGSPVSST Trigger: AGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGCAGGACGCGCGTCCCAGGATGCTTTCTGTTGCAGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499583.1 |
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CDS GCA 72 bp | ATCTGTTACCAGCGATCATGTCTGGGACGCGCGTCCTaGTTTTTCTGCCCGGGCTCTCCCGTCTCCTCCACT | + |
Preference number: 6 (lower is better) Translates to: ICYQRSCLGRAS*FFCPGSPVSST Trigger: AGTGGAGGAGACGGGAGAGCCCGGGCAGAAAAAGCAGGACGCGCGTCCCAGACATGATCGCTGGTAACAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517335.2 |
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CDS CCA 72 bp | GTGGCCATGAGGGAGGGAAGCTGGAGGATCGCGAGGTaGCGCTGTGGCTCCACCTTAAGGAAAGATTCTGGA | + |
Preference number: 6 (lower is better) Translates to: VAMREGSWRIAR*RCGSTLRKDSG Trigger: TCCAGAATCTTTCCTTAAGGTGGAGCCACAGCGCCACCTCGCGATCCTCCAGCTTCCCTCCCTCATGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS GCA 72 bp | AGCTGTGCTCAGCAGCAAGGACATCATTCCTCAGGTTaGTTAAGAAGTCAAACCCAGGCCGGGCACGGTGGC | + |
Preference number: 6 (lower is better) Translates to: SCAQQQGHHSSG*LRSQTQAGHGG Trigger: GCCACCGTGCCCGGCCTGGGTTTGACTTCTTAAGCAACCTGAGGAATGATGTCCTTGCTGCTGAGCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 72 bp | CGCGGCGAGGATGCTAAAGGACTGCAATGGCCAGGATaGAGATCCCCAGCTCAAATTCCTGAGGAAGACACC | + |
Preference number: 6 (lower is better) Translates to: RGEDAKGLQWPG*RSPAQIPEEDT Trigger: GGTGTCTTCCTCAGGAATTTGAGCTGGGGATCTGCATCCTGGCCATTGCAGTCCTTTAGCATCCTCGCCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517335.2 ENST00000523301.1 |
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CDS CCA 72 bp | AGGCAGCATGGTGGAGTGATGGCCTCGGGCTTGGCCTaGGATCCAATGCTGACTTCACCACCTAATGCCTTA | + |
Preference number: 6 (lower is better) Translates to: RQHGGVMASGLA*DPMLTSPPNAL Trigger: TAAGGCATTAGGTGGTGAAGTCAGCATTGGATCCCAGGCCAAGCCCGAGGCCATCACTCCACCATGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS CCA 72 bp | ATGAAAGTGCATGGAAAACCAGTAAGTGTGGGACCCTaGGGGCTTGGACCAGAAAGGGCCAGCCTTCCGTGG | + |
Preference number: 6 (lower is better) Translates to: MKVHGKPVSVGP*GLGPERASLPW Trigger: CCACGGAAGGCTGGCCCTTTCTGGTCCAAGCCCCCAGGGTCCCACACTTACTGGTTTTCCATGCACTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523301.1 |
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CDS CAA 72 bp | CTTGAGAGGCAGCATGGTGGAGTGATGGCCTCGGGCTaGGCCTGGGATCCAATGCTGACTTCACCACCTAAT | + |
Preference number: 6 (lower is better) Translates to: LERQHGGVMASG*AWDPMLTSPPN Trigger: ATTAGGTGGTGAAGTCAGCATTGGATCCCAGGCCAAGCCCGAGGCCATCACTCCACCATGCTGCCTCTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS CAA 72 bp | CAGCTGTGCTCAGCAGCAAGGACATCATTCCTCAGGTaGCTTAAGAAGTCAAACCCAGGCCGGGCACGGTGG | + |
Preference number: 6 (lower is better) Translates to: QLCSAARTSFLR*LKKSNPGRARW Trigger: CCACCGTGCCCGGCCTGGGTTTGACTTCTTAAGCAACCTGAGGAATGATGTCCTTGCTGCTGAGCACAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 72 bp | AGAGTGAACCAGGCATCTGTTACCAGCGATCATGTCTaGAACAGAAAGCATCCTGGGACGCGCGTCCTGCTT | + |
Preference number: 6 (lower is better) Translates to: RVNQASVTSDHV*NRKHPGTRVLL Trigger: AAGCAGGACGCGCGTCCCAGGATGCTTTCTGTTGCAGACATGATCGCTGGTAACAGATGCCTGGTTCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499583.1 |
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CDS CAA 90 bp | AATCTTTCTCTTGAGAGGCAGCATGGTGGAGTGATGGCCTCGGGCTaGGCCTGGGATCCAATGCTGACTTCACCACCTAATGCCTTACAA | + |
Preference number: 6 (lower is better) Translates to: NLSLERQHGGVMASG*AWDPMLTSPPNALQ Trigger: TTGTAAGGCATTAGGTGGTGAAGTCAGCATTGGATCCCAGGCCAAGCCCGAGGCCATCACTCCACCATGCTGCCTCTCAAGAGAAAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS CAA 72 bp | GTCTCTCCTGATCCCATAACCTCTACATGCTCCACCTaGATTTCCAGAGGCTTGAGACCCCAGATGTCCCTT | + |
Preference number: 6 (lower is better) Translates to: VSPDPITSTCST*ISRGLRPQMSL Trigger: AAGGGACATCTGGGGTCTCAAGCCTCTGGAAATCAAGGTGGAGCATGTAGAGGTTATGGGATCAGGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 72 bp | TCAAACTCTGTCTCTCCTGATCCCATAACCTCTACATaGTCCACCTTGATTTCCAGAGGCTTGAGACCCCAG | + |
Preference number: 6 (lower is better) Translates to: SNSVSPDPITST*STLISRGLRPQ Trigger: CTGGGGTCTCAAGCCTCTGGAAATCAAGGTGGAGCATGTAGAGGTTATGGGATCAGGAGAGACAGAGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS TCA 72 bp | CTCAGGCAGCCCAGATTACTAGTGTTGCCAGCCATATaGTTTTGGAAAAGCTCTTTAATCCCTCTGGGTCTC | + |
Preference number: 6 (lower is better) Translates to: LRQPRLLVLPAI*FWKSSLIPLGL Trigger: GAGACCCAGAGGGATTAAAGAGCTTTTCCAAAATCATATGGCTGGCAACACTAGTAATCTGGGCTGCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS TCA 72 bp | ATTCTAGAGGCCTCGGAATTCAATGCTGGGGTAGAATaGTGTTTAGGACTCAGGCAGCCCAGATTACTAGTG | + |
Preference number: 6 (lower is better) Translates to: ILEASEFNAGVE*CLGLRQPRLLV Trigger: CACTAGTAATCTGGGCTGCCTGAGTCCTAAACATCATTCTACCCCAGCATTGAATTCCGAGGCCTCTAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS GCA 72 bp | GCAGATAAATGCGCTGAATCAATTAAGTCAGATGACTaGACCGAACTTCTAGAAGAGGAGCATAGTCCTCAG | + |
Preference number: 6 (lower is better) Translates to: ADKCAESIKSDD*TELLEEEHSPQ Trigger: CTGAGGACTATGCTCCTCTTCTAGAAGTTCGGTGCAGTCATCTGACTTAATTGATTCAGCGCATTTATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS CAA 72 bp | AGATGTCCCTTCTGTAGCTTAATCAAGTCATCTGGGTaGGTTTCTTCACATTGCTTTGGCACATGTACTTAT | + |
Preference number: 6 (lower is better) Translates to: RCPFCSLIKSSG*VSSHCFGTCTY Trigger: ATAAGTACATGTGCCAAAGCAATGTGAAGAAACCAACCCAGATGACTTGATTAAGCTACAGAAGGGACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |
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CDS CAA 72 bp | CAGCTTTGGTTAACTCACCTGGGGAGAGTAATATTCTaGAGAGAGAGTTTTGAATGTAGTTCAGAAATAATT | + |
Preference number: 6 (lower is better) Translates to: QLWLTHLGRVIF*RESFECSSEII Trigger: AATTATTTCTGAACTACATTCAAAACTCTCTCTCAAGAATATTACTCTCCCCAGGTGAGTTAACCAAAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499583.1 ENST00000517335.2 |