Pregenerated sensors for LINC02200 (Homo sapiens)
Ensembl gene IDs: ENSG00000250358Ensembl transcript IDs: ENST00000507565.1, ENST00000508879.5, ENST00000513687.2, ENST00000653123.1, ENST00000663305.1, ENST00000667476.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCCAGGAGGATGGTGGCACGTTAACAGCCCTCTCAGCCCTGTTCTaGCCTGTGGCTCTGAGGCTGGCTCAGCCCCATCACTGTTACAGC | + |
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Preference number: 5 (lower is better) Translates to: AQEDGGTLTALSALF*PVALRLAQPHHCYS Trigger: GCTGTAACAGTGATGGGGCTGAGCCAGCCTCAGAGCCACAGGCCAGAACAGGGCTGAGAGGGCTGTTAACGTGCCACCATCCTCCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS GCA 90 bp | TGGAGACAGGTTTGTGAGCCTAAGCACACAGCTTCAGGTTGCCCCTaGCCCTTTCATTCTTGCTTACTGGGCACAGCCCTGTCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: WRQVCEPKHTASGCP*PFHSCLLGTALSAA Trigger: TGCTGCAGACAGGGCTGTGCCCAGTAAGCAAGAATGAAAGGGGCAGGGGCAACCTGAAGCTGTGTGCTTAGGCTCACAAACCTGTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CCA 90 bp | CAGGAGCCCTGGCCTCCTACATGGGAGCTGAGTGGTAAAATTTCCTaGCAGGATGCAGTACACTTAGGAGGCATTCTGGGAGAAGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: QEPWPPTWELSGKIS*QDAVHLGGILGEEC Trigger: GCACTCTTCTCCCAGAATGCCTCCTAAGTGTACTGCATCCTGCCAGGAAATTTTACCACTCAGCTCCCATGTAGGAGGCCAGGGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 90 bp | CACTTGGCAGAGGATTGCTGGGGGAGAGATACAATCCTCACAGCCTaGACCTCAACTCTCAAAACTCCTCACTTCAGCCCTGACCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HLAEDCWGRDTILTA*TSTLKTPHFSPDLQ Trigger: CTGGAGGTCAGGGCTGAAGTGAGGAGTTTTGAGAGTTGAGGTTCAGGCTGTGAGGATTGTATCTCTCCCCCAGCAATCCTCTGCCAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000513687.2 ENST00000667476.1 |
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| CDS CCA 90 bp | GTCCCACTCCGAAGGAGGGGCAGCCCAGCAGGGCTAGTTGTTTCCTaGGGTCTTGGACTTCAACTCACCAGACTTTCTCTGATAAATACT | + |
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Preference number: 5 (lower is better) Translates to: VPLRRRGSPAGLVVS*GLGLQLTRLSLINT Trigger: AGTATTTATCAGAGAAAGTCTGGTGAGTTGAAGTCCAAGACCCCAGGAAACAACTAGCCCTGCTGGGCTGCCCCTCCTTCGGAGTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS CCA 90 bp | GGTTGTAGACATGAGGGCAGCAGGAAGCCTGGGATGCCTGCAGCCTaGCAACCAGTAAAATGTCTCAGCAATGACCTTCATTGGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GCRHEGSRKPGMPAA*QPVKCLSNDLHWLR Trigger: TCTGAGCCAATGAAGGTCATTGCTGAGACATTTTACTGGTTGCCAGGCTGCAGGCATCCCAGGCTTCCTGCTGCCCTCATGTCTACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS TCA 90 bp | GCCTGGGATGCCTGCAGCCTGGCAACCAGTAAAATGTCTCAGCAATaGCCTTCATTGGCTCAGATTGAGGCACTCATCCAATGCCTAGAC | + |
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Preference number: 5 (lower is better) Translates to: AWDACSLATSKMSQQ*PSLAQIEALIQCLD Trigger: GTCTAGGCATTGGATGAGTGCCTCAATCTGAGCCAATGAAGGTCATTGCTGAGACATTTTACTGGTTGCCAGGCTGCAGGCATCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS GCA 90 bp | TTTCTTTGGAGACAGGTTTGTGAGCCTAAGCACACAGCTTCAGGTTaGCCCTGCCCCTTTCATTCTTGCTTACTGGGCACAGCCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: FLWRQVCEPKHTASG*PCPFHSCLLGTALS Trigger: AGACAGGGCTGTGCCCAGTAAGCAAGAATGAAAGGGGCAGGGGCAACCTGAAGCTGTGTGCTTAGGCTCACAAACCTGTCTCCAAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS TCA 90 bp | AGTTCTGTTGTGGGCTGCATGTTGCAGAAATCCCATCTCTCCAGATaGCAGTGCCATGTTCTTGGACTTCCCAGTCTCCAGAACCATGAG | + |
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Preference number: 5 (lower is better) Translates to: SSVVGCMLQKSHLSR*QCHVLGLPSLQNHE Trigger: CTCATGGTTCTGGAGACTGGGAAGTCCAAGAACATGGCACTGTCATCTGGAGAGATGGGATTTCTGCAACATGCAGCCCACAACAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CCA 90 bp | CCGAAGGAGGGGCAGCCCAGCAGGGCTAGTTGTTTCCTGGGGTCTTaGACTTCAACTCACCAGACTTTCTCTGATAAATACTATTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: PKEGQPSRASCFLGS*TSTHQTFSDKYYSL Trigger: AAGAGAATAGTATTTATCAGAGAAAGTCTGGTGAGTTGAAGTCCAAGACCCCAGGAAACAACTAGCCCTGCTGGGCTGCCCCTCCTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS CCA 90 bp | GCTCAGCCCCATCACTGTTACAGCCTTCTTTGTACCCATGTTCGGTaGGTCCTGAGCTCTTGTCCTTTGTCTAAGAAGAAGGAGGATATG | + |
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Preference number: 5 (lower is better) Translates to: AQPHHCYSLLCTHVR*VLSSCPLSKKKEDM Trigger: CATATCCTCCTTCTTCTTAGACAAAGGACAAGAGCTCAGGACCCACCGAACATGGGTACAAAGAAGGCTGTAACAGTGATGGGGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS GCA 90 bp | AACCTGGATGGCAATGACATTCTGATTCCCCTGGGAACCAAGGTCTaGACCTGCCACTTCAGTGCAAGAAGCAAAGAAGTACAAAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: NLDGNDILIPLGTKV*TCHFSARSKEVQKS Trigger: GCTCTTTTGTACTTCTTTGCTTCTTGCACTGAAGTGGCAGGTGCAGACCTTGGTTCCCAGGGGAATCAGAATGTCATTGCCATCCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513687.2 |
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| CDS CCA 90 bp | AATGTTTCTTGTTCATTAGCTATGCTTGTGCCCAGAATAAAACTGTaGAGCCTGAGTTCAGGAGCCCTGGCCTCCTACATGGGAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NVSCSLAMLVPRIKL*SLSSGALASYMGAE Trigger: CTCAGCTCCCATGTAGGAGGCCAGGGCTCCTGAACTCAGGCTCCACAGTTTTATTCTGGGCACAAGCATAGCTAATGAACAAGAAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 90 bp | CAAACAGTAAGAATCAGGACTAATGGCCATAAACCTGGATGGCAATaGCATTCTGATTCCCCTGGGAACCAAGGTCTGCACCTGCCACTT | + |
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Preference number: 5 (lower is better) Translates to: QTVRIRTNGHKPGWQ*HSDSPGNQGLHLPL Trigger: AAGTGGCAGGTGCAGACCTTGGTTCCCAGGGGAATCAGAATGTCATTGCCATCCAGGTTTATGGCCATTAGTCCTGATTCTTACTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513687.2 |
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| CDS CCA 90 bp | AAAATAGGTGAAGGGTGGGGATCAATCAGAGGAAAGCACACCAAATaGGAAGACAGGGTCTCAACCCAGTTGGTGGATTTGACTTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: KIGEGWGSIRGKHTK*EDRVSTQLVDLTCS Trigger: GCTACAAGTCAAATCCACCAACTGGGTTGAGACCCTGTCTTCCCATTTGGTGTGCTTTCCTCTGATTGATCCCCACCCTTCACCTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS GCA 90 bp | AGGGTCCTCGACAAATCAGTTTCCATCTTTGCAGCCACAGACTCTTaGCCAGAAAGTTGTAGTGTGCCTTTGTGTACTGTCTGTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RVLDKSVSIFAATDS*PESCSVPLCTVCSV Trigger: AACTGAACAGACAGTACACAAAGGCACACTACAACTTTCTGGGCAAGAGTCTGTGGCTGCAAAGATGGAAACTGATTTGTCGAGGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS TCA 90 bp | TTTACTCCTGGGGAGTTAAAAACAGAAGGTGCACAGAGAGGTGTGTaGGATATAAACTGCCTTGCATATAAAGGGCTCACTTGGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FTPGELKTEGAQRGV*DINCLAYKGLTWQR Trigger: CCTCTGCCAAGTGAGCCCTTTATATGCAAGGCAGTTTATATCTCACACACCTCTCTGTGCACCTTCTGTTTTTAACTCCCCAGGAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000513687.2 ENST00000667476.1 |
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| CDS TCA 90 bp | AGCACACCAAATGGGAAGACAGGGTCTCAACCCAGTTGGTGGATTTaGCTTGTAGCTTGGCTTTCAGGATTTAAAATGTCTTTGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: STPNGKTGSQPSWWI*LVAWLSGFKMSLAW Trigger: CCAAGCCAAAGACATTTTAAATCCTGAAAGCCAAGCTACAAGTCAAATCCACCAACTGGGTTGAGACCCTGTCTTCCCATTTGGTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 90 bp | CATGTCCTCAACCCCATTACTCATTTCCCACAAAGTGGGAAATTTTaGGTTGACTGTAAGGAAATGTCGAGTTCTCACCGAGAGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: HVLNPITHFPQSGKF*VDCKEMSSSHRETQ Trigger: CTGAGTCTCTCGGTGAGAACTCGACATTTCCTTACAGTCAACTCAAAATTTCCCACTTTGTGGGAAATGAGTAATGGGGTTGAGGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CCA 90 bp | CTTGTAAACCTCATTCTCCTCAATTGCAAAATGATGGGGCTGGATTaGGTAATCTCTAGAGCGCCCTTCACAGCAATTAAATTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LVNLILLNCKMMGLD*VISRAPFTAIKFSG Trigger: ACCAGAGAATTTAATTGCTGTGAAGGGCGCTCTAGAGATTACCCAATCCAGCCCCATCATTTTGCAATTGAGGAGAATGAGGTTTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 90 bp | ACTTTCTCTTTCATCTGCTTCAATGCTCAGAGTTTTCAGCGGCATTaGCAAACAGTAAGAATCAGGACTAATGGCCATAAACCTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: TFSFICFNAQSFQRH*QTVRIRTNGHKPGW Trigger: CCATCCAGGTTTATGGCCATTAGTCCTGATTCTTACTGTTTGTCAATGCCGCTGAAAACTCTGAGCATTGAAGCAGATGAAAGAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513687.2 |
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| CDS TCA 90 bp | TTTATGTTTCACAGCTATTGGAACTGGGTTGTTCAAAGAAGTACCTaGCCTTGTTTGTCAGATGAGAAACAGAAAATGCTGACACTGAAT | + |
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Preference number: 5 (lower is better) Translates to: FMFHSYWNWVVQRST*PCLSDEKQKMLTLN Trigger: ATTCAGTGTCAGCATTTTCTGTTTCTCATCTGACAAACAAGGTCAGGTACTTCTTTGAACAACCCAGTTCCAATAGCTGTGAAACATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508879.5 ENST00000663305.1 |
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| CDS TCA 90 bp | CCAAATAAACTTCCATCATTTATAAATTGCCCAGTCTGTGGTATTTaGAGAAGATTGCTGCAAGTGATAAAAGTGGCTCCTGGAATGTTC | + |
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Preference number: 5 (lower is better) Translates to: PNKLPSFINCPVCGI*RRLLQVIKVAPGMF Trigger: GAACATTCCAGGAGCCACTTTTATCACTTGCAGCAATCTTCTTCAAATACCACAGACTGGGCAATTTATAAATGATGGAAGTTTATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508879.5 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS TCA 90 bp | CATCTGCTACTGAAAATGCTTTCTCAAGACATGAATTCTGTGAACTaGAAGGGTGATTATAATAGTGCTCCACTGCAATGTTTCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: HLLLKMLSQDMNSVN*KGDYNSAPLQCFLF Trigger: GAACAAGAAACATTGCAGTGGAGCACTATTATAATCACCCTTTCAGTTCACAGAATTCATGTCTTGAGAAAGCATTTTCAGTAGCAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 72 bp | TCTTGGTCATTCTGCCAGCTGGAGACCCCTGGCTGGTaGCAACCCTGCCCAGGAGGATGGTGGCACGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: SWSFCQLETPGW*QPCPGGWWHVN Trigger: GTTAACGTGCCACCATCCTCCTGGGCAGGGTTGTCACCAGCCAGGGGTCTCCAGCTGGCAGAATGACCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CCA 72 bp | GGATTCTTCTTGGTCATTCTGCCAGCTGGAGACCCCTaGCTGGTGACAACCCTGCCCAGGAGGATGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GFFLVILPAGDP*LVTTLPRRMVA Trigger: TGCCACCATCCTCCTGGGCAGGGTTGTCACCAGCCAGGGGTCTCCAGCTGGCAGAATGACCAAGAAGAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CCA 72 bp | CGAAGGAGGGGCAGCCCAGCAGGGCTAGTTGTTTCCTaGGGTCTTGGACTTCAACTCACCAGACTTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RRRGSPAGLVVS*GLGLQLTRLSL Trigger: CAGAGAAAGTCTGGTGAGTTGAAGTCCAAGACCCCAGGAAACAACTAGCCCTGCTGGGCTGCCCCTCCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS CAA 72 bp | GAGGCTGGCTCAGCCCCATCACTGTTACAGCCTTCTTaGTACCCATGTTCGGTGGGTCCTGAGCTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: EAGSAPSLLQPS*YPCSVGPELLS Trigger: GGACAAGAGCTCAGGACCCACCGAACATGGGTACAAAGAAGGCTGTAACAGTGATGGGGCTGAGCCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS GCA 72 bp | GTTTGTGAGCCTAAGCACACAGCTTCAGGTTGCCCCTaGCCCTTTCATTCTTGCTTACTGGGCACAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VCEPKHTASGCP*PFHSCLLGTAL Trigger: CAGGGCTGTGCCCAGTAAGCAAGAATGAAAGGGGCAGGGGCAACCTGAAGCTGTGTGCTTAGGCTCACAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS TCA 72 bp | GTGGGCTGCATGTTGCAGAAATCCCATCTCTCCAGATaGCAGTGCCATGTTCTTGGACTTCCCAGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VGCMLQKSHLSR*QCHVLGLPSLQ Trigger: CTGGAGACTGGGAAGTCCAAGAACATGGCACTGTCATCTGGAGAGATGGGATTTCTGCAACATGCAGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS GCA 72 bp | AGACAGGTTTGTGAGCCTAAGCACACAGCTTCAGGTTaGCCCTGCCCCTTTCATTCTTGCTTACTGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: RQVCEPKHTASG*PCPFHSCLLGT Trigger: TGTGCCCAGTAAGCAAGAATGAAAGGGGCAGGGGCAACCTGAAGCTGTGTGCTTAGGCTCACAAACCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS TCA 72 bp | CTGAACCTCAACTCTCAAAACTCCTCACTTCAGCCCTaGCCTCCAGAGCACCCATTTCTTCCAACCGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LNLNSQNSSLQP*PPEHPFLPTAC Trigger: ACAAGCGGTTGGAAGAAATGGGTGCTCTGGAGGTCAGGGCTGAAGTGAGGAGTTTTGAGAGTTGAGGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513687.2 ENST00000667476.1 |
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| CDS TCA 72 bp | GAGGATTGCTGGGGGAGAGATACAATCCTCACAGCCTaGACCTCAACTCTCAAAACTCCTCACTTCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: EDCWGRDTILTA*TSTLKTPHFSP Trigger: AGGGCTGAAGTGAGGAGTTTTGAGAGTTGAGGTTCAGGCTGTGAGGATTGTATCTCTCCCCCAGCAATCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000513687.2 ENST00000667476.1 |
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| CDS CCA 72 bp | GGGCAGCCCAGCAGGGCTAGTTGTTTCCTGGGGTCTTaGACTTCAACTCACCAGACTTTCTCTGATAAATAC | + |
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Preference number: 6 (lower is better) Translates to: GQPSRASCFLGS*TSTHQTFSDKY Trigger: GTATTTATCAGAGAAAGTCTGGTGAGTTGAAGTCCAAGACCCCAGGAAACAACTAGCCCTGCTGGGCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS CCA 72 bp | TGGCCTCCTACATGGGAGCTGAGTGGTAAAATTTCCTaGCAGGATGCAGTACACTTAGGAGGCATTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: WPPTWELSGKIS*QDAVHLGGILG Trigger: TCCCAGAATGCCTCCTAAGTGTACTGCATCCTGCCAGGAAATTTTACCACTCAGCTCCCATGTAGGAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 72 bp | GCCTGCAGCCTGGCAACCAGTAAAATGTCTCAGCAATaGCCTTCATTGGCTCAGATTGAGGCACTCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: ACSLATSKMSQQ*PSLAQIEALIQ Trigger: TTGGATGAGTGCCTCAATCTGAGCCAATGAAGGTCATTGCTGAGACATTTTACTGGTTGCCAGGCTGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507565.1 ENST00000508879.5 ENST00000513687.2 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS GCA 72 bp | GGCAATGACATTCTGATTCCCCTGGGAACCAAGGTCTaGACCTGCCACTTCAGTGCAAGAAGCAAAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: GNDILIPLGTKV*TCHFSARSKEV Trigger: TACTTCTTTGCTTCTTGCACTGAAGTGGCAGGTGCAGACCTTGGTTCCCAGGGGAATCAGAATGTCATTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513687.2 |
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| CDS CCA 72 bp | TGTTCATTAGCTATGCTTGTGCCCAGAATAAAACTGTaGAGCCTGAGTTCAGGAGCCCTGGCCTCCTACATG | + |
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Preference number: 6 (lower is better) Translates to: CSLAMLVPRIKL*SLSSGALASYM Trigger: CATGTAGGAGGCCAGGGCTCCTGAACTCAGGCTCCACAGTTTTATTCTGGGCACAAGCATAGCTAATGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 72 bp | GCCACAGACTCTTGCCCAGAAAGTTGTAGTGTGCCTTaGTGTACTGTCTGTTCAGTTTCAGGGGCCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: ATDSCPESCSVP*CTVCSVSGAIH Trigger: ATGGATGGCCCCTGAAACTGAACAGACAGTACACAAAGGCACACTACAACTTTCTGGGCAAGAGTCTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 72 bp | CACCTCCTAGGGTCCTCGACAAATCAGTTTCCATCTTaGCAGCCACAGACTCTTGCCCAGAAAGTTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: HLLGSSTNQFPS*QPQTLAQKVVV Trigger: CACTACAACTTTCTGGGCAAGAGTCTGTGGCTGCAAAGATGGAAACTGATTTGTCGAGGACCCTAGGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS TCA 72 bp | AGAATCAGGACTAATGGCCATAAACCTGGATGGCAATaGCATTCTGATTCCCCTGGGAACCAAGGTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RIRTNGHKPGWQ*HSDSPGNQGLH Trigger: GTGCAGACCTTGGTTCCCAGGGGAATCAGAATGTCATTGCCATCCAGGTTTATGGCCATTAGTCCTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513687.2 |
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| CDS CAA 90 bp | GTTTCAGTTCACCTCCTAGGGTCCTCGACAAATCAGTTTCCATCTTaGCAGCCACAGACTCTTGCCCAGAAAGTTGTAGTGTGCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: VSVHLLGSSTNQFPS*QPQTLAQKVVVCLC Trigger: ACAAAGGCACACTACAACTTTCTGGGCAAGAGTCTGTGGCTGCAAAGATGGAAACTGATTTGTCGAGGACCCTAGGAGGTGAACTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 90 bp | GCATGTTGCAGAAATCCCATCTCTCCAGATGACAGTGCCATGTTCTaGGACTTCCCAGTCTCCAGAACCATGAGCCAAATAAACTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ACCRNPISPDDSAMF*DFPVSRTMSQINFH Trigger: ATGGAAGTTTATTTGGCTCATGGTTCTGGAGACTGGGAAGTCCAAGAACATGGCACTGTCATCTGGAGAGATGGGATTTCTGCAACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 90 bp | ATCTTTGCAGCCACAGACTCTTGCCCAGAAAGTTGTAGTGTGCCTTaGTGTACTGTCTGTTCAGTTTCAGGGGCCATCCATTTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: IFAATDSCPESCSVP*CTVCSVSGAIHLKM Trigger: CATCTTCAAATGGATGGCCCCTGAAACTGAACAGACAGTACACAAAGGCACACTACAACTTTCTGGGCAAGAGTCTGTGGCTGCAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CCA 72 bp | CATCACTGTTACAGCCTTCTTTGTACCCATGTTCGGTaGGTCCTGAGCTCTTGTCCTTTGTCTAAGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HHCYSLLCTHVR*VLSSCPLSKKK Trigger: CTTCTTCTTAGACAAAGGACAAGAGCTCAGGACCCACCGAACATGGGTACAAAGAAGGCTGTAACAGTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 72 bp | AGAAATCCCATCTCTCCAGATGACAGTGCCATGTTCTaGGACTTCCCAGTCTCCAGAACCATGAGCCAAATA | + |
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Preference number: 6 (lower is better) Translates to: RNPISPDDSAMF*DFPVSRTMSQI Trigger: TATTTGGCTCATGGTTCTGGAGACTGGGAAGTCCAAGAACATGGCACTGTCATCTGGAGAGATGGGATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 72 bp | AAGCACACCAAATGGGAAGACAGGGTCTCAACCCAGTaGGTGGATTTGACTTGTAGCTTGGCTTTCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: KHTKWEDRVSTQ*VDLTCSLAFRI Trigger: AATCCTGAAAGCCAAGCTACAAGTCAAATCCACCAACTGGGTTGAGACCCTGTCTTCCCATTTGGTGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS GCA 72 bp | GACAAATCAGTTTCCATCTTTGCAGCCACAGACTCTTaGCCAGAAAGTTGTAGTGTGCCTTTGTGTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: DKSVSIFAATDS*PESCSVPLCTV Trigger: GACAGTACACAAAGGCACACTACAACTTTCTGGGCAAGAGTCTGTGGCTGCAAAGATGGAAACTGATTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 90 bp | TCCATGCAAGCATTTAGAAGGCAAGAATGGCATAACCTATTTTCTTaGAAACTCCCAAACACCCACACCTGCACACAGAGGGATCATGAC | + |
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Preference number: 6 (lower is better) Translates to: SMQAFRRQEWHNLFS*KLPNTHTCTQRDHD Trigger: GTCATGATCCCTCTGTGTGCAGGTGTGGGTGTTTGGGAGTTTCAAAGAAAATAGGTTATGCCATTCTTGCCTTCTAAATGCTTGCATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 72 bp | GGGGAGTTAAAAACAGAAGGTGCACAGAGAGGTGTGTaGGATATAAACTGCCTTGCATATAAAGGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: GELKTEGAQRGV*DINCLAYKGLT Trigger: AGTGAGCCCTTTATATGCAAGGCAGTTTATATCTCACACACCTCTCTGTGCACCTTCTGTTTTTAACTCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000513687.2 ENST00000667476.1 |
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| CDS CAA 72 bp | TTGTGTACTGTCTGTTCAGTTTCAGGGGCCATCCATTaGAAGATGTGCTGGAGTTCTGCTTCTTTCCTACTT | + |
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Preference number: 6 (lower is better) Translates to: LCTVCSVSGAIH*KMCWSSASFLL Trigger: AAGTAGGAAAGAAGCAGAACTCCAGCACATCTTCAAATGGATGGCCCCTGAAACTGAACAGACAGTACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 72 bp | GCATTTAGAAGGCAAGAATGGCATAACCTATTTTCTTaGAAACTCCCAAACACCCACACCTGCACACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: AFRRQEWHNLFS*KLPNTHTCTQR Trigger: CCTCTGTGTGCAGGTGTGGGTGTTTGGGAGTTTCAAAGAAAATAGGTTATGCCATTCTTGCCTTCTAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 90 bp | TCCTCAACCCCATTACTCATTTCCCACAAAGTGGGAAATTTTGAGTaGACTGTAAGGAAATGTCGAGTTCTCACCGAGAGACTCAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SSTPLLISHKVGNFE*TVRKCRVLTERLSH Trigger: ATGACTGAGTCTCTCGGTGAGAACTCGACATTTCCTTACAGTCAACTCAAAATTTCCCACTTTGTGGGAAATGAGTAATGGGGTTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS TCA 72 bp | TCTCTTGCACTCATTTGCTCTTTTACTCTTAGGCCATaGGATAACTCACCAGATGACAGTGCCATGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLALICSFTLRP*DNSPDDSAMFL Trigger: CAAGAACATGGCACTGTCATCTGGTGAGTTATCTCATGGCCTAAGAGTAAAAGAGCAAATGAGTGCAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 72 bp | AATGGGAAGACAGGGTCTCAACCCAGTTGGTGGATTTaGCTTGTAGCTTGGCTTTCAGGATTTAAAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: NGKTGSQPSWWI*LVAWLSGFKMS Trigger: AGACATTTTAAATCCTGAAAGCCAAGCTACAAGTCAAATCCACCAACTGGGTTGAGACCCTGTCTTCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 72 bp | ATCTTCCCCTGCTTGTCTCTTTATGTTTCACAGCTATaGGAACTGGGTTGTTCAAAGAAGTACCTGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: IFPCLSLYVSQL*ELGCSKKYLTL Trigger: CAAGGTCAGGTACTTCTTTGAACAACCCAGTTCCAATAGCTGTGAAACATAAAGAGACAAGCAGGGGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508879.5 ENST00000663305.1 |
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| CDS CAA 72 bp | AAGTGGTTGCTGGTCTCACTTCTGCCTCTTAACTACTaGTGTAACTGTAGTTCAGCTACCATTTCTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KWLLVSLLPLNY*CNCSSATISLL Trigger: CAAGAGAGAAATGGTAGCTGAACTACAGTTACACAAGTAGTTAAGAGGCAGAAGTGAGACCAGCAACCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 90 bp | CTTCCCCTGCTTGTCTCTTTATGTTTCACAGCTATTGGAACTGGGTaGTTCAAAGAAGTACCTGACCTTGTTTGTCAGATGAGAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: LPLLVSLCFTAIGTG*FKEVPDLVCQMRNR Trigger: TCTGTTTCTCATCTGACAAACAAGGTCAGGTACTTCTTTGAACAACCCAGTTCCAATAGCTGTGAAACATAAAGAGACAAGCAGGGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508879.5 ENST00000663305.1 |
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| CDS CAA 72 bp | CCATTACTCATTTCCCACAAAGTGGGAAATTTTGAGTaGACTGTAAGGAAATGTCGAGTTCTCACCGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PLLISHKVGNFE*TVRKCRVLTER Trigger: TCTCTCGGTGAGAACTCGACATTTCCTTACAGTCAACTCAAAATTTCCCACTTTGTGGGAAATGAGTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653123.1 |
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| CDS CAA 90 bp | TTCTGGAAAATCTTCCCCTGCTTGTCTCTTTATGTTTCACAGCTATaGGAACTGGGTTGTTCAAAGAAGTACCTGACCTTGTTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: FWKIFPCLSLYVSQL*ELGCSKKYLTLFVR Trigger: TCTGACAAACAAGGTCAGGTACTTCTTTGAACAACCCAGTTCCAATAGCTGTGAAACATAAAGAGACAAGCAGGGGAAGATTTTCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508879.5 ENST00000663305.1 |
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| CDS TCA 72 bp | TTCATCTGCTTCAATGCTCAGAGTTTTCAGCGGCATTaGCAAACAGTAAGAATCAGGACTAATGGCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: FICFNAQSFQRH*QTVRIRTNGHK Trigger: TTTATGGCCATTAGTCCTGATTCTTACTGTTTGTCAATGCCGCTGAAAACTCTGAGCATTGAAGCAGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513687.2 |
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| CDS CAA 72 bp | CTTGTCTCTTTATGTTTCACAGCTATTGGAACTGGGTaGTTCAAAGAAGTACCTGACCTTGTTTGTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LVSLCFTAIGTG*FKEVPDLVCQM Trigger: CATCTGACAAACAAGGTCAGGTACTTCTTTGAACAACCCAGTTCCAATAGCTGTGAAACATAAAGAGACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508879.5 ENST00000663305.1 |
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| CDS TCA 72 bp | CTAGAAGGCAATTTGTATGTTAGGAAGTACTGTCTCTaGGAGCTCAGAAAGCAAGGGCTCTTCTATAATTTT | + |
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Preference number: 6 (lower is better) Translates to: LEGNLYVRKYCL*ELRKQGLFYNF Trigger: AAAATTATAGAAGAGCCCTTGCTTTCTGAGCTCTCAGAGACAGTACTTCCTAACATACAAATTGCCTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CCA 72 bp | TCAAGTCATTCCATGCAAGCATTTAGAAGGCAAGAATaGCATAACCTATTTTCTTTGAAACTCCCAAACACC | + |
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Preference number: 6 (lower is better) Translates to: SSHSMQAFRRQE*HNLFSLKLPNT Trigger: GGTGTTTGGGAGTTTCAAAGAAAATAGGTTATGCCATTCTTGCCTTCTAAATGCTTGCATGGAATGACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 72 bp | ACTTCCATCATTTATAAATTGCCCAGTCTGTGGTATTaGAAGAAGATTGCTGCAAGTGATAAAAGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSIIYKLPSLWY*KKIAASDKSGS Trigger: GGAGCCACTTTTATCACTTGCAGCAATCTTCTTCAAATACCACAGACTGGGCAATTTATAAATGATGGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508879.5 ENST00000653123.1 ENST00000663305.1 ENST00000667476.1 |
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| CDS CAA 72 bp | AAGGGTGATTATAATAGTGCTCCACTGCAATGTTTCTaGTTCATTAGCTATGCTTGTGCCCAGAATAAAACT | + |
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Preference number: 6 (lower is better) Translates to: KGDYNSAPLQCF*FISYACAQNKT Trigger: AGTTTTATTCTGGGCACAAGCATAGCTAATGAACAAGAAACATTGCAGTGGAGCACTATTATAATCACCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS TCA 72 bp | AAAAATGTAAGTACATCAGGTGTTCTCTATTGTCAGTaGCCAAAGGTTACTTCAGTAAACTATCTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KNVSTSGVLYCQ*PKVTSVNYLLR Trigger: CCTCAGAAGATAGTTTACTGAAGTAACCTTTGGTCACTGACAATAGAGAACACCTGATGTACTTACATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667476.1 |
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| CDS CAA 72 bp | TATATATACATCTTAGGTTTAGTGAAGAGTGGACAGTaGTGGAGAAATATGATTGGGCAAAACAGTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: YIYILGLVKSGQ*WRNMIGQNSVI Trigger: GATCACACTGTTTTGCCCAATCATATTTCTCCACAACTGTCCACTCTTCACTAAACCTAAGATGTATATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653123.1 ENST00000663305.1 |
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