Pregenerated sensors for LINC02194 (Homo sapiens)
Ensembl gene IDs: ENSG00000260264Ensembl transcript IDs: ENST00000567127.1, ENST00000567624.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 72 bp | TTTCAAGGAACCACAGGGCAGAGGTTCAATCAGGCCTaGGCAGGGAGCTTTTGTCAGAAGAGAATGGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FQGTTGQRFNQA*AGSFCQKRMEH Trigger: ATGCTCCATTCTCTTCTGACAAAAGCTCCCTGCCAAGGCCTGATTGAACCTCTGCCCTGTGGTTCCTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567127.1 |
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| CDS CAA 90 bp | ATGACGATGTTTCAAGGAACCACAGGGCAGAGGTTCAATCAGGCCTaGGCAGGGAGCTTTTGTCAGAAGAGAATGGAGCATCATCAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: MTMFQGTTGQRFNQA*AGSFCQKRMEHHQL Trigger: TAACTGATGATGCTCCATTCTCTTCTGACAAAAGCTCCCTGCCAAGGCCTGATTGAACCTCTGCCCTGTGGTTCCTTGAAACATCGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567127.1 |
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| CDS TCA 72 bp | GCTTTCCTTATTTCTTCTTACATAAGACTCCAATTGTaGCTGGGGACACTCTCTCTAGCTGGGTCACCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AFLISSYIRLQL*LGTLSLAGSPV Trigger: CACAGGTGACCCAGCTAGAGAGAGTGTCCCCAGTCACAATTGGAGTCTTATGTAAGAAGAAATAAGGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567127.1 |
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| CDS CAA 72 bp | GGCACACATGGACTAAAGAGTGTCATCCCCGCCATCTaGAATTCTCTCTTGATGTTCACACATAGCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GTHGLKSVIPAI*NSLLMFTHSLV Trigger: AACAAGGCTATGTGTGAACATCAAGAGAGAATTCAAGATGGCGGGGATGACACTCTTTAGTCCATGTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567127.1 |
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| CDS CAA 72 bp | CTAGGACTTAATGGTGGAGTCAGATCAGCCATGTTGTaGCATAAGGTAACAAGCACATGTTTAGGATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGLNGGVRSAML*HKVTSTCLGYL Trigger: CAGGTATCCTAAACATGTGCTTGTTACCTTATGCAACAACATGGCTGATCTGACTCCACCATTAAGTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567624.1 |
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