Pregenerated sensors for LINC02144 (Homo sapiens)

Ensembl gene IDs: ENSG00000248708

Ensembl transcript IDs: ENST00000511417.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CACAGTAGTCACACTTCTGGATATACAGTGGTCTCTTGGTATCTGTaGGAGACGGCTTCCAGGACTTCTCATGGAAATGATAGAATTGGA	+
Preference number: 5 (lower is better) Translates to: HSSHTSGYTVVSWYL*ETASRTSHGNDRIG Trigger: TCCAATTCTATCATTTCCATGAGAAGTCCTGGAAGCCGTCTCCCACAGATACCAAGAGACCACTGTATATCCAGAAGTGTGACTACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511417.2
CDS CCA 72 bp	TTTCACAGGTCGGGAAACTTGTACAAGGACTCTGTGTaGACAAGGTATGAGACCAGATTCCCCAACAGGGCT	+
Preference number: 6 (lower is better) Translates to: FHRSGNLYKDSV*TRYETRFPNRA Trigger: AGCCCTGTTGGGGAATCTGGTCTCATACCTTGTCCACACAGAGTCCTTGTACAAGTTTCCCGACCTGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511417.2
CDS CCA 72 bp	CACAGTAGTCACACTTCTGGATATACAGTGGTCTCTTaGTATCTGTGGGAGACGGCTTCCAGGACTTCTCAT	+
Preference number: 6 (lower is better) Translates to: HSSHTSGYTVVS*YLWETASRTSH Trigger: ATGAGAAGTCCTGGAAGCCGTCTCCCACAGATACCAAGAGACCACTGTATATCCAGAAGTGTGACTACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511417.2
CDS CCA 72 bp	CACACTTCTGGATATACAGTGGTCTCTTGGTATCTGTaGGAGACGGCTTCCAGGACTTCTCATGGAAATGAT	+
Preference number: 6 (lower is better) Translates to: HTSGYTVVSWYL*ETASRTSHGND Trigger: ATCATTTCCATGAGAAGTCCTGGAAGCCGTCTCCCACAGATACCAAGAGACCACTGTATATCCAGAAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511417.2
CDS CAA 90 bp	ATCTGTGGGAGACGGCTTCCAGGACTTCTCATGGAAATGATAGAATaGGAGTCTAGAAAACGTCTTTATTTCATGCTTCTCAACTGTGCT	+
Preference number: 6 (lower is better) Translates to: ICGRRLPGLLMEMIE*ESRKRLYFMLLNCA Trigger: AGCACAGTTGAGAAGCATGAAATAAAGACGTTTTCTAGACTCCAATTCTATCATTTCCATGAGAAGTCCTGGAAGCCGTCTCCCACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511417.2
CDS CCA 72 bp	GTCATTGTTCTGAATGGATACTGTTTAAACCTGCTGTaGAAAGCAGTATGGTGGTTCCTGAAGAAATTAAAG	+
Preference number: 6 (lower is better) Translates to: VIVLNGYCLNLL*KAVWWFLKKLK Trigger: CTTTAATTTCTTCAGGAACCACCATACTGCTTTCCACAGCAGGTTTAAACAGTATCCATTCAGAACAATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511417.2

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