Pregenerated sensors for LINC02132 (Homo sapiens)
Ensembl gene IDs: ENSG00000268804Ensembl transcript IDs: ENST00000598933.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGAAGATGGCCGTGAGCCAGGGACTGCAGGTGGCCTCTAAAGGCTaGAGAAGCGAGGAAACAGATTCTCCCCTAAAGCCTCCAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LKMAVSQGLQVASKG*RSEETDSPLKPPER Trigger: CCTTTCTGGAGGCTTTAGGGGAGAATCTGTTTCCTCGCTTCTCCAGCCTTTAGAGGCCACCTGCAGTCCCTGGCTCACGGCCATCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS TCA 90 bp | AGAGATTTTTCCTTTCACAGCCCCACGTCATCGCAGGAGTCGTTGTaGGAGGGAGGCAGGAGGGTCAGGGTCAGCAAGGAGATGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: RDFSFHSPTSSQESL*EGGRRVRVSKEMVD Trigger: ATCAACCATCTCCTTGCTGACCCTGACCCTCCTGCCTCCCTCTCACAACGACTCCTGCGATGACGTGGGGCTGTGAAAGGAAAAATCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS TCA 72 bp | GGGAGGCAGGAGGGTCAGGGTCAGCAAGGAGATGGTTaGTGGAGGCGGAGGTCAGGGCGATGCGACCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRQEGQGQQGDG*WRRRSGRCDRW Trigger: CCAGCGGTCGCATCGCCCTGACCTCCGCCTCCATCAACCATCTCCTTGCTGACCCTGACCCTCCTGCCTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS CAA 72 bp | ATGGAGGCGGAGGTCAGGGCGATGCGACCGCTGGCTTaGAAGATGGCCGTGAGCCAGGGACTGCAGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: MEAEVRAMRPLA*KMAVSQGLQVA Trigger: GGCCACCTGCAGTCCCTGGCTCACGGCCATCTTCAAAGCCAGCGGTCGCATCGCCCTGACCTCCGCCTCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS CAA 72 bp | AGGGAGGCAGGAGGGTCAGGGTCAGCAAGGAGATGGTaGATGGAGGCGGAGGTCAGGGCGATGCGACCGCTG | + |
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Preference number: 6 (lower is better) Translates to: REAGGSGSARRW*MEAEVRAMRPL Trigger: CAGCGGTCGCATCGCCCTGACCTCCGCCTCCATCAACCATCTCCTTGCTGACCCTGACCCTCCTGCCTCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS CAA 90 bp | AGATGGTTGATGGAGGCGGAGGTCAGGGCGATGCGACCGCTGGCTTaGAAGATGGCCGTGAGCCAGGGACTGCAGGTGGCCTCTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RWLMEAEVRAMRPLA*KMAVSQGLQVASKG Trigger: GCCTTTAGAGGCCACCTGCAGTCCCTGGCTCACGGCCATCTTCAAAGCCAGCGGTCGCATCGCCCTGACCTCCGCCTCCATCAACCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS CCA 72 bp | GCCGTGAGCCAGGGACTGCAGGTGGCCTCTAAAGGCTaGAGAAGCGAGGAAACAGATTCTCCCCTAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AVSQGLQVASKG*RSEETDSPLKP Trigger: AGGCTTTAGGGGAGAATCTGTTTCCTCGCTTCTCCAGCCTTTAGAGGCCACCTGCAGTCCCTGGCTCACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS TCA 72 bp | TCCAAGCAGGAAAGGGGTTTCCAGGTCACAGGTAGGTaGGACAACTGGTTGCATTCTTTTGAGTTTAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SKQERGFQVTGR*DNWLHSFEFRD Trigger: GTCTCTAAACTCAAAAGAATGCAACCAGTTGTCTCACCTACCTGTGACCTGGAAACCCCTTTCCTGCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS GCA 72 bp | AGATTCTCCCCTAAAGCCTCCAGAAAGGAACCGTTCTaGCCACACTTTGACTTCTCAAAACTGGCTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RFSPKASRKEPF*PHFDFSKLASL Trigger: AAGAGAAGCCAGTTTTGAGAAGTCAAAGTGTGGGCAGAACGGTTCCTTTCTGGAGGCTTTAGGGGAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS GCA 72 bp | GGGGTTTCCAGGTCACAGGTAGGTGAGACAACTGGTTaGATTCTTTTGAGTTTAGAGACAACCGGTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: GVSRSQVGETTG*ILLSLETTGCI Trigger: AATGCAACCGGTTGTCTCTAAACTCAAAAGAATGCAACCAGTTGTCTCACCTACCTGTGACCTGGAAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS GCA 72 bp | TCTTTTGAGTTTCTGGTAAGCGAGGCAATCAGAATATaGATCTATCTCAGTGAGCAGAGGGATGAGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SFEFLVSEAIRI*IYLSEQRDEFE Trigger: TTCAAACTCATCCCTCTGCTCACTGAGATAGATGCATATTCTGATTGCCTCGCTTACCAGAAACTCAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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| CDS CAA 72 bp | AACTGGTTGCATTCTTTTGAGTTTAGAGACAACCGGTaGCATTCTTTTGAGTTTCTGGTAAGCGAGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: NWLHSFEFRDNR*HSFEFLVSEAI Trigger: GATTGCCTCGCTTACCAGAAACTCAAAAGAATGCAACCGGTTGTCTCTAAACTCAAAAGAATGCAACCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598933.1 |
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