Pregenerated sensors for LINC02131 (Homo sapiens)
Ensembl gene IDs: ENSG00000261154Ensembl transcript IDs: ENST00000563289.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCAATCTGTGTGCTGCCATTTCCTTCTCAGAGTCCTCAAATAGCTaGTTTGTGTGTTGTGTCCATGTTTTATTGCTCTATTCAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: PNLCAAISFSESSNS*FVCCVHVLLLYSMG Trigger: TCCCATTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGAGGACTCTGAGAAGGAAATGGCAGCACACAGATTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS GCA 90 bp | CAGAGTCCTCAAATAGCTGCTTTGTGTGTTGTGTCCATGTTTTATTaGTCTATTCAATGGGAGAGGCAGAATCGAGTGTGTTTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: QSPQIAALCVVSMFY*SIQWERQNRVCFFM Trigger: CATGAAGAAACACACTCGATTCTGCCTCTCCCATTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGAGGACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 90 bp | GTAGTTAGCTTTCCAGCTCTCTCACGTTCATTTCGTGCTTTGACTTaGATCTTCAGAGCTTGGGGCTCAGTGGAGGTTAGCGAAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: VVSFPALSRSFRALT*IFRAWGSVEVSEMG Trigger: CCCCATTTCGCTAACCTCCACTGAGCCCCAAGCTCTGAAGATCAAAGTCAAAGCACGAAATGAACGTGAGAGAGCTGGAAAGCTAACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 72 bp | TTTCCAGCTCTCTCACGTTCATTTCGTGCTTTGACTTaGATCTTCAGAGCTTGGGGCTCAGTGGAGGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: FPALSRSFRALT*IFRAWGSVEVS Trigger: GCTAACCTCCACTGAGCCCCAAGCTCTGAAGATCAAAGTCAAAGCACGAAATGAACGTGAGAGAGCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 72 bp | GTTAGCTTTCCAGCTCTCTCACGTTCATTTCGTGCTTaGACTTTGATCTTCAGAGCTTGGGGCTCAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VSFPALSRSFRA*TLIFRAWGSVE Trigger: CTCCACTGAGCCCCAAGCTCTGAAGATCAAAGTCAAAGCACGAAATGAACGTGAGAGAGCTGGAAAGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 90 bp | GGCTTTGTAGTTAGCTTTCCAGCTCTCTCACGTTCATTTCGTGCTTaGACTTTGATCTTCAGAGCTTGGGGCTCAGTGGAGGTTAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: GFVVSFPALSRSFRA*TLIFRAWGSVEVSE Trigger: TTCGCTAACCTCCACTGAGCCCCAAGCTCTGAAGATCAAAGTCAAAGCACGAAATGAACGTGAGAGAGCTGGAAAGCTAACTACAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CCA 72 bp | CGTTCATTTCGTGCTTTGACTTTGATCTTCAGAGCTTaGGGCTCAGTGGAGGTTAGCGAAATGGGGCATATT | + |
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Preference number: 6 (lower is better) Translates to: RSFRALTLIFRA*GSVEVSEMGHI Trigger: AATATGCCCCATTTCGCTAACCTCCACTGAGCCCCAAGCTCTGAAGATCAAAGTCAAAGCACGAAATGAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CCA 72 bp | CATTCTTCAACGGTCACATCTTGTATCACTCTACTGTaGTTCAGCAGCATTTCAAATTCTGGTCTTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HSSTVTSCITLL*FSSISNSGLLP Trigger: GGGGAGAAGACCAGAATTTGAAATGCTGCTGAACCACAGTAGAGTGATACAAGATGTGACCGTTGAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 90 bp | ATCTGTGTGCTGCCATTTCCTTCTCAGAGTCCTCAAATAGCTGCTTaGTGTGTTGTGTCCATGTTTTATTGCTCTATTCAATGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ICVLPFPSQSPQIAA*CVVSMFYCSIQWER Trigger: CCTCTCCCATTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGAGGACTCTGAGAAGGAAATGGCAGCACACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS GCA 72 bp | CAAATAGCTGCTTTGTGTGTTGTGTCCATGTTTTATTaGTCTATTCAATGGGAGAGGCAGAATCGAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: QIAALCVVSMFY*SIQWERQNRVC Trigger: ACACACTCGATTCTGCCTCTCCCATTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS GCA 72 bp | TGTGCTGCCATTTCCTTCTCAGAGTCCTCAAATAGCTaGTTTGTGTGTTGTGTCCATGTTTTATTGCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: CAAISFSESSNS*FVCCVHVLLLY Trigger: ATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGAGGACTCTGAGAAGGAAATGGCAGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 72 bp | TCAAATAGCTGCTTTGTGTGTTGTGTCCATGTTTTATaGCTCTATTCAATGGGAGAGGCAGAATCGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SNSCFVCCVHVL*LYSMGEAESSV Trigger: CACACTCGATTCTGCCTCTCCCATTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 90 bp | TCAGAGTCCTCAAATAGCTGCTTTGTGTGTTGTGTCCATGTTTTATaGCTCTATTCAATGGGAGAGGCAGAATCGAGTGTGTTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SESSNSCFVCCVHVL*LYSMGEAESSVFLH Trigger: ATGAAGAAACACACTCGATTCTGCCTCTCCCATTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGAGGACTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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| CDS CAA 72 bp | CTGCCATTTCCTTCTCAGAGTCCTCAAATAGCTGCTTaGTGTGTTGTGTCCATGTTTTATTGCTCTATTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPFPSQSPQIAA*CVVSMFYCSIQ Trigger: TTGAATAGAGCAATAAAACATGGACACAACACACAAAGCAGCTATTTGAGGACTCTGAGAAGGAAATGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563289.1 |
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