Pregenerated sensors for LINC02130 (Homo sapiens)

Ensembl gene IDs: ENSG00000260009

Ensembl transcript IDs: ENST00000566054.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	GCAGAGCTGGGGTCCCCGTTCCCAGTCTTGGCGGTCTaGGCTTTGTGCTGCATTAGATGTACCAGTTGGCTG	+
Preference number: 6 (lower is better) Translates to: AELGSPFPVLAV*ALCCIRCTSWL Trigger: CAGCCAACTGGTACATCTAATGCAGCACAAAGCTCAGACCGCCAAGACTGGGAACGGGGACCCCAGCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566054.1
CDS GCA 72 bp	TCTCAAGGGTGTTTATGCTGCATGGTGCTTCCTGTATaGCACACCCTGCTCCAAGCGCGTTTCTACTTCAGC	+
Preference number: 6 (lower is better) Translates to: SQGCLCCMVLPV*HTLLQARFYFS Trigger: GCTGAAGTAGAAACGCGCTTGGAGCAGGGTGTGGCATACAGGAAGCACCATGCAGCATAAACACCCTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566054.1
CDS CCA 72 bp	AAACCTGTAGCAGCTTTATTCATAACAGCTCCAAATTaGAAACAGCGCAGATGCCTCTCGATAGTCGACCGG	+
Preference number: 6 (lower is better) Translates to: KPVAALFITAPN*KQRRCLSIVDR Trigger: CCGGTCGACTATCGAGAGGCATCTGCGCTGTTTCCAATTTGGAGCTGTTATGAATAAAGCTGCTACAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566054.1
CDS CAA 72 bp	GAAACCTGTAGCAGCTTTATTCATAACAGCTCCAAATaGGAAACAGCGCAGATGCCTCTCGATAGTCGACCG	+
Preference number: 6 (lower is better) Translates to: ETCSSFIHNSSK*ETAQMPLDSRP Trigger: CGGTCGACTATCGAGAGGCATCTGCGCTGTTTCCAATTTGGAGCTGTTATGAATAAAGCTGCTACAGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566054.1

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