Pregenerated sensors for LINC02121 (Homo sapiens)
Ensembl gene IDs: ENSG00000250529Ensembl transcript IDs: ENST00000507950.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGATCCTTGGAGACAGCGACATCTGCGAAGCTTCCAAGCCACGGTaGTTCCACCTTCACAAGTATCCTTCAAAGGCATCCTGCAACCAC | + |
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Preference number: 5 (lower is better) Translates to: LILGDSDICEASKPR*FHLHKYPSKASCNH Trigger: GTGGTTGCAGGATGCCTTTGAAGGATACTTGTGAAGGTGGAACCACCGTGGCTTGGAAGCTTCGCAGATGTCGCTGTCTCCAAGGATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS TCA 90 bp | TCTAAGATGGGATTTCTCTGCTCATCAGGTCATTGTGTTTGCAATTaGTCCTTGGAGACAGCGACATCTGCGAAGCTTCCAAGCCACGGT | + |
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Preference number: 5 (lower is better) Translates to: SKMGFLCSSGHCVCN*SLETATSAKLPSHG Trigger: ACCGTGGCTTGGAAGCTTCGCAGATGTCGCTGTCTCCAAGGATCAATTGCAAACACAATGACCTGATGAGCAGAGAAATCCCATCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS TCA 90 bp | GTTTGCTGCCTTGCTCGGTCCAATCCTGCATTTCTGGAACTTGTTTaGTCACAGATATCTTCGATCAAGAAACAACTGTTAGCATGCCGT | + |
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Preference number: 5 (lower is better) Translates to: VCCLARSNPAFLELV*SQISSIKKQLLACR Trigger: ACGGCATGCTAACAGTTGTTTCTTGATCGAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAGGCAGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS CCA 90 bp | CAAATTGCAGGGTTTGCTGCCTTGCTCGGTCCAATCCTGCATTTCTaGAACTTGTTTGATCACAGATATCTTCGATCAAGAAACAACTGT | + |
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Preference number: 5 (lower is better) Translates to: QIAGFAALLGPILHF*NLFDHRYLRSRNNC Trigger: ACAGTTGTTTCTTGATCGAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAGGCAGCAAACCCTGCAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS CAA 72 bp | CCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATaGCAGGGTTTGCTGCCTTGCTCGGTCCAATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSKYSVVGFKSK*QGLLPCSVQSC Trigger: GCAGGATTGGACCGAGCAAGGCAGCAAACCCTGCAATTTGCTTTTGAATCCTACAACGGAGTACTTGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS TCA 72 bp | GGATTTCTCTGCTCATCAGGTCATTGTGTTTGCAATTaGTCCTTGGAGACAGCGACATCTGCGAAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GFLCSSGHCVCN*SLETATSAKLP Trigger: TGGAAGCTTCGCAGATGTCGCTGTCTCCAAGGATCAATTGCAAACACAATGACCTGATGAGCAGAGAAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS CAA 90 bp | GGTTTGCTGCCTTGCTCGGTCCAATCCTGCATTTCTGGAACTTGTTaGATCACAGATATCTTCGATCAAGAAACAACTGTTAGCATGCCG | + |
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Preference number: 6 (lower is better) Translates to: GLLPCSVQSCISGTC*ITDIFDQETTVSMP Trigger: CGGCATGCTAACAGTTGTTTCTTGATCGAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAGGCAGCAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS CCA 72 bp | GGGTTTGCTGCCTTGCTCGGTCCAATCCTGCATTTCTaGAACTTGTTTGATCACAGATATCTTCGATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GFAALLGPILHF*NLFDHRYLRSR Trigger: TCTTGATCGAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAGGCAGCAAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS GCA 72 bp | AAATTGCAGGGTTTGCTGCCTTGCTCGGTCCAATCCTaGATTTCTGGAACTTGTTTGATCACAGATATCTTC | + |
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Preference number: 6 (lower is better) Translates to: KLQGLLPCSVQS*ISGTCLITDIF Trigger: GAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAGGCAGCAAACCCTGCAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS CAA 72 bp | CCTTGCTCGGTCCAATCCTGCATTTCTGGAACTTGTTaGATCACAGATATCTTCGATCAAGAAACAACTGTT | + |
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Preference number: 6 (lower is better) Translates to: PCSVQSCISGTC*ITDIFDQETTV Trigger: AACAGTTGTTTCTTGATCGAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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| CDS TCA 72 bp | CTTGCTCGGTCCAATCCTGCATTTCTGGAACTTGTTTaGTCACAGATATCTTCGATCAAGAAACAACTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LARSNPAFLELV*SQISSIKKQLL Trigger: TAACAGTTGTTTCTTGATCGAAGATATCTGTGATCAAACAAGTTCCAGAAATGCAGGATTGGACCGAGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507950.1 |
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