Pregenerated sensors for LINC02116 (Homo sapiens)

Ensembl gene IDs: ENSG00000250417

Ensembl transcript IDs: ENST00000509455.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTCCCAGGTCTAGGGCCACCCCAGAGCTCCCGGTCACCCTCAAGCTaGAATGTTAGACGCGGAGGGCTGGCTTCCCATGACATTTTCACC	+
Preference number: 5 (lower is better) Translates to: FPGLGPPQSSRSPSS*NVRRGGLASHDIFT Trigger: GGTGAAAATGTCATGGGAAGCCAGCCCTCCGCGTCTAACATTTCAGCTTGAGGGTGACCGGGAGCTCTGGGGTGGCCCTAGACCTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509455.1
CDS CAA 72 bp	AGCAGGTCTCCCTCTAAGTGCCACGGGACAAGCGCGTaGGTGGTAAACGGAGCCGCGGGGAAGAGTGGGGCC	+
Preference number: 6 (lower is better) Translates to: SRSPSKCHGTSA*VVNGAAGKSGA Trigger: GGCCCCACTCTTCCCCGCGGCTCCGTTTACCACCAACGCGCTTGTCCCGTGGCACTTAGAGGGAGACCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509455.1
CDS CAA 90 bp	CTCAGGAGGAGCAGGTCTCCCTCTAAGTGCCACGGGACAAGCGCGTaGGTGGTAAACGGAGCCGCGGGGAAGAGTGGGGCCTTTGAGAAC	+
Preference number: 6 (lower is better) Translates to: LRRSRSPSKCHGTSA*VVNGAAGKSGAFEN Trigger: GTTCTCAAAGGCCCCACTCTTCCCCGCGGCTCCGTTTACCACCAACGCGCTTGTCCCGTGGCACTTAGAGGGAGACCTGCTCCTCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509455.1
CDS TCA 72 bp	CTAGGGCCACCCCAGAGCTCCCGGTCACCCTCAAGCTaGAATGTTAGACGCGGAGGGCTGGCTTCCCATGAC	+
Preference number: 6 (lower is better) Translates to: LGPPQSSRSPSS*NVRRGGLASHD Trigger: GTCATGGGAAGCCAGCCCTCCGCGTCTAACATTTCAGCTTGAGGGTGACCGGGAGCTCTGGGGTGGCCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509455.1
CDS GCA 72 bp	TCCTGGATTCTCAGGAGGAGCAGGTCTCCCTCTAAGTaGCACGGGACAAGCGCGTTGGTGGTAAACGGAGCC	+
Preference number: 6 (lower is better) Translates to: SWILRRSRSPSK*HGTSALVVNGA Trigger: GGCTCCGTTTACCACCAACGCGCTTGTCCCGTGGCACTTAGAGGGAGACCTGCTCCTCCTGAGAATCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509455.1
CDS CCA 72 bp	GGTCACCCTCAAGCTGAAATGTTAGACGCGGAGGGCTaGCTTCCCATGACATTTTCACCGGAGCCCCTGGCA	+
Preference number: 6 (lower is better) Translates to: GHPQAEMLDAEG*LPMTFSPEPLA Trigger: TGCCAGGGGCTCCGGTGAAAATGTCATGGGAAGCCAGCCCTCCGCGTCTAACATTTCAGCTTGAGGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509455.1
CDS CCA 72 bp	AGATCAGAAAGCAACGTCGTCTCTTCAGTTCCTTCCTaGATTCTCAGGAGGAGCAGGTCTCCCTCTAAGTGC	+
Preference number: 6 (lower is better) Translates to: RSESNVVSSVPS*ILRRSRSPSKC Trigger: GCACTTAGAGGGAGACCTGCTCCTCCTGAGAATCCAGGAAGGAACTGAAGAGACGACGTTGCTTTCTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509455.1

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