Pregenerated sensors for LINC02103 (Homo sapiens)
Ensembl gene IDs: ENSG00000249785Ensembl transcript IDs: ENST00000512849.1, ENST00000650976.1, ENST00000664667.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGCACAGAAGTTCCCAGCTGGACCCGAGTTTAGCCCAGTTGGACTaGATGCTGACGTTGCTACAGCTCATGCTTAGGAGGGCACAACAG | + |
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Preference number: 5 (lower is better) Translates to: GHRSSQLDPSLAQLD*MLTLLQLMLRRAQQ Trigger: CTGTTGTGCCCTCCTAAGCATGAGCTGTAGCAACGTCAGCATCCAGTCCAACTGGGCTAAACTCGGGTCCAGCTGGGAACTTCTGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CCA 90 bp | TGGATGCTGACGTTGCTACAGCTCATGCTTAGGAGGGCACAACAGTaGCCTTGCCTGAGACCCATTTCTGGGTCCATGACTACTCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: WMLTLLQLMLRRAQQ*PCLRPISGSMTTPR Trigger: TCTCGGAGTAGTCATGGACCCAGAAATGGGTCTCAGGCAAGGCCACTGTTGTGCCCTCCTAAGCATGAGCTGTAGCAACGTCAGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS TCA 90 bp | CCTCTTGGTGAGTTAGACTTCAAGTATCTTGCCCTCCTTAAGCTCTaGTTGATGATACTGAAAGGAGGGGCCATCTGGGCTTCCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PLGELDFKYLALLKL*LMILKGGAIWASWV Trigger: AACCCAGGAAGCCCAGATGGCCCCTCCTTTCAGTATCATCAATCAGAGCTTAAGGAGGGCAAGATACTTGAAGTCTAACTCACCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512849.1 ENST00000650976.1 ENST00000664667.1 |
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| CDS CCA 90 bp | TCCTTTATCAGTCATTCTAGATTTGACTCACCTTTGGCCAGCACTTaGCTAGTTCTCGCTTGTTCGTCAGATGGAATGATGAGAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: SFISHSRFDSPLAST*LVLACSSDGMMRTS Trigger: TGAAGTTCTCATCATTCCATCTGACGAACAAGCGAGAACTAGCCAAGTGCTGGCCAAAGGTGAGTCAAATCTAGAATGACTGATAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512849.1 ENST00000664667.1 |
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| CDS TCA 90 bp | ATGTCTATGAGTTTACTCAGAACCACAGATAGCAGATCAGTTCCTTaGGGGAAGAAGAGAAAGACGCATCTATGTAGTATCTCCAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: MSMSLLRTTDSRSVP*GKKRKTHLCSISSL Trigger: GAGACTGGAGATACTACATAGATGCGTCTTTCTCTTCTTCCCTCAAGGAACTGATCTGCTATCTGTGGTTCTGAGTAAACTCATAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CAA 90 bp | TCCCAGCTGGACCCGAGTTTAGCCCAGTTGGACTGGATGCTGACGTaGCTACAGCTCATGCTTAGGAGGGCACAACAGTGGCCTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SQLDPSLAQLDWMLT*LQLMLRRAQQWPCL Trigger: CAGGCAAGGCCACTGTTGTGCCCTCCTAAGCATGAGCTGTAGCAACGTCAGCATCCAGTCCAACTGGGCTAAACTCGGGTCCAGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CCA 72 bp | GAGGGCACAACAGTGGCCTTGCCTGAGACCCATTTCTaGGTCCATGACTACTCCGAGACCGCTCCTCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: EGTTVALPETHF*VHDYSETAPRV Trigger: AACACGAGGAGCGGTCTCGGAGTAGTCATGGACCCAGAAATGGGTCTCAGGCAAGGCCACTGTTGTGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CCA 72 bp | AGTTCCCAGCTGGACCCGAGTTTAGCCCAGTTGGACTaGATGCTGACGTTGCTACAGCTCATGCTTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSQLDPSLAQLD*MLTLLQLMLRR Trigger: CCTCCTAAGCATGAGCTGTAGCAACGTCAGCATCCAGTCCAACTGGGCTAAACTCGGGTCCAGCTGGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CAA 72 bp | GACCCGAGTTTAGCCCAGTTGGACTGGATGCTGACGTaGCTACAGCTCATGCTTAGGAGGGCACAACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: DPSLAQLDWMLT*LQLMLRRAQQW Trigger: CCACTGTTGTGCCCTCCTAAGCATGAGCTGTAGCAACGTCAGCATCCAGTCCAACTGGGCTAAACTCGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CCA 72 bp | ACGTTGCTACAGCTCATGCTTAGGAGGGCACAACAGTaGCCTTGCCTGAGACCCATTTCTGGGTCCATGACT | + |
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Preference number: 6 (lower is better) Translates to: TLLQLMLRRAQQ*PCLRPISGSMT Trigger: AGTCATGGACCCAGAAATGGGTCTCAGGCAAGGCCACTGTTGTGCCCTCCTAAGCATGAGCTGTAGCAACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CAA 72 bp | CACAGAAGTTCCCAGCTGGACCCGAGTTTAGCCCAGTaGGACTGGATGCTGACGTTGCTACAGCTCATGCTT | + |
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Preference number: 6 (lower is better) Translates to: HRSSQLDPSLAQ*DWMLTLLQLML Trigger: AAGCATGAGCTGTAGCAACGTCAGCATCCAGTCCAACTGGGCTAAACTCGGGTCCAGCTGGGAACTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS GCA 72 bp | GATACTGAAAGGAGGGGCCATCTGGGCTTCCTGGGTTaGGTAGTGGCTCAGAAAGCTGTGAAACTCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: DTERRGHLGFLG*VVAQKAVKLTD Trigger: ATCAGTGAGTTTCACAGCTTTCTGAGCCACTACGCAACCCAGGAAGCCCAGATGGCCCCTCCTTTCAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512849.1 ENST00000650976.1 ENST00000664667.1 |
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| CDS CAA 72 bp | GAGATGAGAGTCAGTCACTGCAGCTTTGGCCAGCACTaGGCTAGTTCTCGCTTGTTCGTCAGATGGAATGAT | + |
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Preference number: 6 (lower is better) Translates to: EMRVSHCSFGQH*ASSRLFVRWND Trigger: ATCATTCCATCTGACGAACAAGCGAGAACTAGCCAAGTGCTGGCCAAAGCTGCAGTGACTGACTCTCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650976.1 |
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| CDS CAA 90 bp | TCGTGTTCAGAGATGAGAGTCAGTCACTGCAGCTTTGGCCAGCACTaGGCTAGTTCTCGCTTGTTCGTCAGATGGAATGATGAGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SCSEMRVSHCSFGQH*ASSRLFVRWNDENF Trigger: GAAGTTCTCATCATTCCATCTGACGAACAAGCGAGAACTAGCCAAGTGCTGGCCAAAGCTGCAGTGACTGACTCTCATCTCTGAACACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650976.1 |
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| CDS TCA 72 bp | GAGTTAGACTTCAAGTATCTTGCCCTCCTTAAGCTCTaGTTGATGATACTGAAAGGAGGGGCCATCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ELDFKYLALLKL*LMILKGGAIWA Trigger: AGCCCAGATGGCCCCTCCTTTCAGTATCATCAATCAGAGCTTAAGGAGGGCAAGATACTTGAAGTCTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512849.1 ENST00000650976.1 ENST00000664667.1 |
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| CDS CAA 72 bp | TCTTCCTTTATCAGTCATTCTAGATTTGACTCACCTTaGGCCAGCACTTGGCTAGTTCTCGCTTGTTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSFISHSRFDSP*ASTWLVLACSS Trigger: TGACGAACAAGCGAGAACTAGCCAAGTGCTGGCCAAAGGTGAGTCAAATCTAGAATGACTGATAAAGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512849.1 ENST00000664667.1 |
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| CDS TCA 72 bp | AGTTTACTCAGAACCACAGATAGCAGATCAGTTCCTTaGGGGAAGAAGAGAAAGACGCATCTATGTAGTATC | + |
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Preference number: 6 (lower is better) Translates to: SLLRTTDSRSVP*GKKRKTHLCSI Trigger: GATACTACATAGATGCGTCTTTCTCTTCTTCCCTCAAGGAACTGATCTGCTATCTGTGGTTCTGAGTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS CAA 72 bp | GAACATATATTTATCTGTAGGTCAGGGAGAAAGATGTaGATAAGGACTATCCTACTTCCACCACTCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: EHIFICRSGRKM*IRTILLPPLSS Trigger: AGAACTGAGTGGTGGAAGTAGGATAGTCCTTATCAACATCTTTCTCCCTGACCTACAGATAAATATATGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650976.1 ENST00000664667.1 |
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| CDS TCA 72 bp | AAAATGAATGAGATCCAAGTTATTCTGGGTGGTACGTaGACTGAATCTTTATTAGTTTACCCTTCATACCAA | + |
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Preference number: 6 (lower is better) Translates to: KMNEIQVILGGT*TESLLVYPSYQ Trigger: TTGGTATGAAGGGTAAACTAATAAAGATTCAGTTCACGTACCACCCAGAATAACTTGGATCTCATTCATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664667.1 |
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| CDS CCA 72 bp | CCTTCATACCAATTAAATAGCACTTATGCCTTTATATaGTACCCAAAGCTGTTATTAGAAAAAGAGACCCTT | + |
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Preference number: 6 (lower is better) Translates to: PSYQLNSTYAFI*YPKLLLEKETL Trigger: AAGGGTCTCTTTTTCTAATAACAGCTTTGGGTACCATATAAAGGCATAAGTGCTATTTAATTGGTATGAAGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512849.1 ENST00000664667.1 |
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