Pregenerated sensors for LINC02053 (Homo sapiens)
Ensembl gene IDs: ENSG00000241696Ensembl transcript IDs: ENST00000464537.1, ENST00000488262.1, ENST00000653805.1, ENST00000654328.1, ENST00000668671.1, ENST00000670709.1, ENST00000670884.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACTCTCTGTGTTCCAACCTTGGTGGTCGTGCTGAGGTGGACCTCTaGTTCTGTGGTTCCACCTTGAGAAGTGAGATGTTTCTCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: HSLCSNLGGRAEVDL*FCGSTLRSEMFLSP Trigger: AGGGGAGAGAAACATCTCACTTCTCAAGGTGGAACCACAGAAGCAGAGGTCCACCTCAGCACGACCACCAAGGTTGGAACACAGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 90 bp | GATGTTTCTCTCCCCTTCTCTGAGGTTACTCCCAGTCTTCAAGAGTaGCTCTCCAGGAGTTCTATCCAATGGGAGGAAAGAAGAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: DVSLPFSEVTPSLQE*LSRSSIQWEERRKP Trigger: TGGCTTTCTTCTTTCCTCCCATTGGATAGAACTCCTGGAGAGCCACTCTTGAAGACTGGGAGTAACCTCAGAGAAGGGGAGAGAAACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS TCA 90 bp | TCTCAGATGCCTTCAATTTCCAGGGTAACATATCAGGTGTTTCCATaGACTCACTCTCTGTGTTCCAACCTTGGTGGTCGTGCTGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SQMPSISRVTYQVFP*THSLCSNLGGRAEV Trigger: CACCTCAGCACGACCACCAAGGTTGGAACACAGAGAGTGAGTTCATGGAAACACCTGATATGTTACCCTGGAAATTGAAGGCATCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 90 bp | GGGTTATATTCAAGAGACGAGGCCCCTGAAAGCAATCTTATGAGTTaGGAGTGGGGTCATAGAGGGACAAACTATTTGGGTGCCAAACAG | + |
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Preference number: 5 (lower is better) Translates to: GLYSRDEAPESNLMS*EWGHRGTNYLGAKQ Trigger: CTGTTTGGCACCCAAATAGTTTGTCCCTCTATGACCCCACTCCCAACTCATAAGATTGCTTTCAGGGGCCTCGTCTCTTGAATATAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS GCA 90 bp | CTGAGTATAGATGGCAGCTATTTTCAGATTTCTGTGAAATTCAGCTaGCCAGCATCTGGAGAACTTGAAGCCTGTGGGAAGTTTCACACC | + |
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Preference number: 5 (lower is better) Translates to: LSIDGSYFQISVKFS*PASGELEACGKFHT Trigger: GGTGTGAAACTTCCCACAGGCTTCAAGTTCTCCAGATGCTGGGCAGCTGAATTTCACAGAAATCTGAAAATAGCTGCCATCTATACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CCA 90 bp | GTTCTATCCAATGGGAGGAAAGAAGAAAGCCAATATGCTTTTCTTTaGATCCCCTTACCAAATGTTCTCCATGCCTCTGTCCTTTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: VLSNGRKEESQYAFL*IPLPNVLHASVLSR Trigger: GCGGGAAAGGACAGAGGCATGGAGAACATTTGGTAAGGGGATCCAAAGAAAAGCATATTGGCTTTCTTCTTTCCTCCCATTGGATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 90 bp | GTTACTCCCAGTCTTCAAGAGTGGCTCTCCAGGAGTTCTATCCAATaGGAGGAAAGAAGAAAGCCAATATGCTTTTCTTTGGATCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: VTPSLQEWLSRSSIQ*EERRKPICFSLDPL Trigger: AAGGGGATCCAAAGAAAAGCATATTGGCTTTCTTCTTTCCTCCCATTGGATAGAACTCCTGGAGAGCCACTCTTGAAGACTGGGAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 90 bp | TCTTATCACTTTGACCACACCTTGCTTGTAGACTCTTTTTGGTCGTaGACCTTGGGCATCTTTATCTTTTTCCACACTTCTGAAGATAAC | + |
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Preference number: 5 (lower is better) Translates to: SYHFDHTLLVDSFWS*TLGIFIFFHTSEDN Trigger: GTTATCTTCAGAAGTGTGGAAAAAGATAAAGATGCCCAAGGTCCACGACCAAAAAGAGTCTACAAGCAAGGTGTGGTCAAAGTGATAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS CCA 90 bp | TTAGACTCTTATCACTTTGACCACACCTTGCTTGTAGACTCTTTTTaGTCGTGGACCTTGGGCATCTTTATCTTTTTCCACACTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LDSYHFDHTLLVDSF*SWTLGIFIFFHTSE Trigger: TTCAGAAGTGTGGAAAAAGATAAAGATGCCCAAGGTCCACGACCAAAAAGAGTCTACAAGCAAGGTGTGGTCAAAGTGATAAGAGTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS TCA 90 bp | CATAAGTCTTCAAAGCGAACTCCAAAATTCCTTCACTGGCTTGGCTaGCATTCTTCTCTTATGAGGATTAGTGCCAATTTATATCATGCT | + |
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Preference number: 5 (lower is better) Translates to: HKSSKRTPKFLHWLG*HSSLMRISANLYHA Trigger: AGCATGATATAAATTGGCACTAATCCTCATAAGAGAAGAATGTCAGCCAAGCCAGTGAAGGAATTTTGGAGTTCGCTTTGAAGACTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488262.1 ENST00000653805.1 |
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| CDS TCA 72 bp | AACTCACTCTCTGTGTTCCAACCTTGGTGGTCGTGCTaGGGTGGACCTCTGCTTCTGTGGTTCCACCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: NSLSVFQPWWSC*GGPLLLWFHLE Trigger: CTCAAGGTGGAACCACAGAAGCAGAGGTCCACCTCAGCACGACCACCAAGGTTGGAACACAGAGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CAA 72 bp | CGTGCTGAGGTGGACCTCTGCTTCTGTGGTTCCACCTaGAGAAGTGAGATGTTTCTCTCCCCTTCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RAEVDLCFCGST*RSEMFLSPSLR Trigger: CCTCAGAGAAGGGGAGAGAAACATCTCACTTCTCAAGGTGGAACCACAGAAGCAGAGGTCCACCTCAGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CAA 90 bp | CTTGGTGGTCGTGCTGAGGTGGACCTCTGCTTCTGTGGTTCCACCTaGAGAAGTGAGATGTTTCTCTCCCCTTCTCTGAGGTTACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGGRAEVDLCFCGST*RSEMFLSPSLRLLP Trigger: TGGGAGTAACCTCAGAGAAGGGGAGAGAAACATCTCACTTCTCAAGGTGGAACCACAGAAGCAGAGGTCCACCTCAGCACGACCACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CAA 72 bp | AGGTGTTTCCATGAACTCACTCTCTGTGTTCCAACCTaGGTGGTCGTGCTGAGGTGGACCTCTGCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RCFHELTLCVPT*VVVLRWTSASV Trigger: CACAGAAGCAGAGGTCCACCTCAGCACGACCACCAAGGTTGGAACACAGAGAGTGAGTTCATGGAAACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS GCA 72 bp | TGTTCCAACCTTGGTGGTCGTGCTGAGGTGGACCTCTaGTTCTGTGGTTCCACCTTGAGAAGTGAGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: CSNLGGRAEVDL*FCGSTLRSEMF Trigger: AAACATCTCACTTCTCAAGGTGGAACCACAGAAGCAGAGGTCCACCTCAGCACGACCACCAAGGTTGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 72 bp | CTCCCCTTCTCTGAGGTTACTCCCAGTCTTCAAGAGTaGCTCTCCAGGAGTTCTATCCAATGGGAGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPFSEVTPSLQE*LSRSSIQWEER Trigger: TCTTTCCTCCCATTGGATAGAACTCCTGGAGAGCCACTCTTGAAGACTGGGAGTAACCTCAGAGAAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CAA 90 bp | CAGGTGCAAGGCCTGGGTAATCTGCTAGACATTCTGATAATCATCTaGACTCATGCTGGGGTCACAATGGTACCCACAGAAGCAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: QVQGLGNLLDILIII*THAGVTMVPTEAAM Trigger: CATGGCTGCTTCTGTGGGTACCATTGTGACCCCAGCATGAGTCAAGATGATTATCAGAATGTCTAGCAGATTACCCAGGCCTTGCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS TCA 72 bp | ATGCTGGGGTCACAATGGTACCCACAGAAGCAGCCATaGCATAGGGACAGCATAGCTATTTGCCAGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: MLGSQWYPQKQP*HRDSIAICQLS Trigger: TGACAACTGGCAAATAGCTATGCTGTCCCTATGTCATGGCTGCTTCTGTGGGTACCATTGTGACCCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS CAA 72 bp | CTCCTTCACCAGTATAGGCTGGCATCATCCAGTCCATaGAGGGCCCAAATAGAACAAAATGGCAGAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLHQYRLASSSP*RAQIEQNGRGK Trigger: CTTCCCTCTGCCATTTTGTTCTATTTGGGCCCTCAATGGACTGGATGATGCCAGCCTATACTGGTGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668671.1 |
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| CDS TCA 72 bp | TGTCACCTCAGAGAGAACTTTGCTGACTACCTTATCTaGAACGGCCCTCCCATTCTTCTGGTATCTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CHLRENFADYLI*NGPPILLVSEQ Trigger: CTGCTCAGATACCAGAAGAATGGGAGGGCCGTTTCAGATAAGGTAGTCAGCAAAGTTCTCTCTGAGGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 72 bp | TCAAGAGACGAGGCCCCTGAAAGCAATCTTATGAGTTaGGAGTGGGGTCATAGAGGGACAAACTATTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SRDEAPESNLMS*EWGHRGTNYLG Trigger: ACCCAAATAGTTTGTCCCTCTATGACCCCACTCCCAACTCATAAGATTGCTTTCAGGGGCCTCGTCTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CAA 90 bp | AGTAAAGATCTCCTTCACCAGTATAGGCTGGCATCATCCAGTCCATaGAGGGCCCAAATAGAACAAAATGGCAGAGGGAAGGCAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SKDLLHQYRLASSSP*RAQIEQNGRGKAED Trigger: ATCCTCTGCCTTCCCTCTGCCATTTTGTTCTATTTGGGCCCTCAATGGACTGGATGATGCCAGCCTATACTGGTGAAGGAGATCTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668671.1 |
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| CDS CCA 72 bp | TCTGCTAGACATTCTGATAATCATCTTGACTCATGCTaGGGTCACAATGGTACCCACAGAAGCAGCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: SARHSDNHLDSC*GHNGTHRSSHD Trigger: GTCATGGCTGCTTCTGTGGGTACCATTGTGACCCCAGCATGAGTCAAGATGATTATCAGAATGTCTAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS CAA 72 bp | ATGAGTTGGGAGTGGGGTCATAGAGGGACAAACTATTaGGGTGCCAAACAGTCTGAGTATAGATGGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: MSWEWGHRGTNY*GAKQSEYRWQL Trigger: TAGCTGCCATCTATACTCAGACTGTTTGGCACCCAAATAGTTTGTCCCTCTATGACCCCACTCCCAACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CAA 72 bp | GGCCTGGGTAATCTGCTAGACATTCTGATAATCATCTaGACTCATGCTGGGGTCACAATGGTACCCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLGNLLDILIII*THAGVTMVPTE Trigger: TTCTGTGGGTACCATTGTGACCCCAGCATGAGTCAAGATGATTATCAGAATGTCTAGCAGATTACCCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS TCA 72 bp | ACTTCAACTTGGATGTCACCTCAGAGAGAACTTTGCTaGCTACCTTATCTGAAACGGCCCTCCCATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSTWMSPQRELC*LPYLKRPSHSS Trigger: AGAAGAATGGGAGGGCCGTTTCAGATAAGGTAGTCAGCAAAGTTCTCTCTGAGGTGACATCCAAGTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS TCA 72 bp | CCTTCAATTTCCAGGGTAACATATCAGGTGTTTCCATaGACTCACTCTCTGTGTTCCAACCTTGGTGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: PSISRVTYQVFP*THSLCSNLGGR Trigger: ACGACCACCAAGGTTGGAACACAGAGAGTGAGTTCATGGAAACACCTGATATGTTACCCTGGAAATTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 72 bp | ACCCCTGTCCTCTCATCATCTTACAGAAAAGCAATCTaGGGCAAAGGGCCATATGTAGGAGGGTTATATTCA | + |
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Preference number: 6 (lower is better) Translates to: TPVLSSSYRKAI*GKGPYVGGLYS Trigger: TGAATATAACCCTCCTACATATGGCCCTTTGCCCCAGATTGCTTTTCTGTAAGATGATGAGAGGACAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CAA 72 bp | ATGTACTTCAACTTGGATGTCACCTCAGAGAGAACTTaGCTGACTACCTTATCTGAAACGGCCCTCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: MYFNLDVTSERT*LTTLSETALPF Trigger: GAATGGGAGGGCCGTTTCAGATAAGGTAGTCAGCAAAGTTCTCTCTGAGGTGACATCCAAGTTGAAGTACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS TCA 72 bp | TATATTCAAGAGACGAGGCCCCTGAAAGCAATCTTATaGGTTGGGAGTGGGGTCATAGAGGGACAAACTATT | + |
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Preference number: 6 (lower is better) Translates to: YIQETRPLKAIL*VGSGVIEGQTI Trigger: AATAGTTTGTCCCTCTATGACCCCACTCCCAACTCATAAGATTGCTTTCAGGGGCCTCGTCTCTTGAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CAA 90 bp | AGCAATCTTATGAGTTGGGAGTGGGGTCATAGAGGGACAAACTATTaGGGTGCCAAACAGTCTGAGTATAGATGGCAGCTATTTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SNLMSWEWGHRGTNY*GAKQSEYRWQLFSD Trigger: ATCTGAAAATAGCTGCCATCTATACTCAGACTGTTTGGCACCCAAATAGTTTGTCCCTCTATGACCCCACTCCCAACTCATAAGATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CAA 90 bp | CACTTTGACCACACCTTGCTTGTAGACTCTTTTTGGTCGTGGACCTaGGGCATCTTTATCTTTTTCCACACTTCTGAAGATAACTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: HFDHTLLVDSFWSWT*GIFIFFHTSEDNSS Trigger: ACTGGAGTTATCTTCAGAAGTGTGGAAAAAGATAAAGATGCCCAAGGTCCACGACCAAAAAGAGTCTACAAGCAAGGTGTGGTCAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS CAA 90 bp | TTCTCTCCCTTGGTCTTTTTAGACTCTTATCACTTTGACCACACCTaGCTTGTAGACTCTTTTTGGTCGTGGACCTTGGGCATCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: FSPLVFLDSYHFDHT*LVDSFWSWTLGIFI Trigger: GATAAAGATGCCCAAGGTCCACGACCAAAAAGAGTCTACAAGCAAGGTGTGGTCAAAGTGATAAGAGTCTAAAAAGACCAAGGGAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670709.1 |
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| CDS TCA 72 bp | ACATTCAAAGTTCTTATCATGGTCCATAATCTCCCTTaGTCTGCCCCGTCACTATTTCTCTGGCCACGTTAT | + |
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Preference number: 6 (lower is better) Translates to: TFKVLIMVHNLP*SAPSLFLWPRY Trigger: ATAACGTGGCCAGAGAAATAGTGACGGGGCAGATCAAGGGAGATTATGGACCATGATAAGAACTTTGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS TCA 72 bp | ACCATTTCAGGGGTGTTTCTGGAAAAGATTGGCATTTaGATCAGTAGGCTGAGTAAAGATCTCCTTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: TISGVFLEKIGI*ISRLSKDLLHQ Trigger: CTGGTGAAGGAGATCTTTACTCAGCCTACTGATTCAAATGCCAATCTTTTCCAGAAACACCCCTGAAATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668671.1 |
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| CDS CCA 72 bp | TTTACAAAATGGGTGAGTGTAGTGTCTGTGACCAGCTaGAGAGTGCATAAGTCTTCAAAGCGAACTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: FTKWVSVVSVTS*RVHKSSKRTPK Trigger: TTTTGGAGTTCGCTTTGAAGACTTATGCACTCTCCAGCTGGTCACAGACACTACACTCACCCATTTTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488262.1 ENST00000653805.1 |
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| CDS CAA 72 bp | GGTAGCTCTAGGCTGGTTACTTTCTGTAGTCTCGCATaGGCCTGTAGAAATTCATATTGTTACTTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSRLVTFCSLA*ACRNSYCYFSS Trigger: AGAGCTGAAGTAACAATATGAATTTCTACAGGCCAATGCGAGACTACAGAAAGTAACCAGCCTAGAGCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS TCA 72 bp | TGTTTCTGGAAAAGATTGGCATTTGAATCAGTAGGCTaGGTAAAGATCTCCTTCACCAGTATAGGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: CFWKRLAFESVG*VKISFTSIGWH Trigger: ATGCCAGCCTATACTGGTGAAGGAGATCTTTACTCAGCCTACTGATTCAAATGCCAATCTTTTCCAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668671.1 |
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| CDS CAA 90 bp | ATGCTCCTTCCCATATGCTTAGAATGCTCTTCCTCTGAATATCATTaGGCTACCTTCTTAATGTACTTCAACTTGGATGTCACCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: MLLPICLECSSSEYH*ATFLMYFNLDVTSE Trigger: CTCTGAGGTGACATCCAAGTTGAAGTACATTAAGAAGGTAGCCAAATGATATTCAGAGGAAGAGCATTCTAAGCATATGGGAAGGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS TCA 72 bp | TCAAAGCGAACTCCAAAATTCCTTCACTGGCTTGGCTaGCATTCTTCTCTTATGAGGATTAGTGCCAATTTA | + |
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Preference number: 6 (lower is better) Translates to: SKRTPKFLHWLG*HSSLMRISANL Trigger: TAAATTGGCACTAATCCTCATAAGAGAAGAATGTCAGCCAAGCCAGTGAAGGAATTTTGGAGTTCGCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488262.1 ENST00000653805.1 |
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| CDS TCA 72 bp | CATGCTCCTTCCCATATGCTTAGAATGCTCTTCCTCTaGATATCATTTGGCTACCTTCTTAATGTACTTCAA | + |
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Preference number: 6 (lower is better) Translates to: HAPSHMLRMLFL*ISFGYLLNVLQ Trigger: TTGAAGTACATTAAGAAGGTAGCCAAATGATATTCAGAGGAAGAGCATTCTAAGCATATGGGAAGGAGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654328.1 |
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| CDS CCA 72 bp | ACAAACTATTTGGGTGCCAAACAGTCTGAGTATAGATaGCAGCTATTTTCAGATTTCTGTGAAATTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TNYLGAKQSEYR*QLFSDFCEIQL Trigger: CAGCTGAATTTCACAGAAATCTGAAAATAGCTGCCATCTATACTCAGACTGTTTGGCACCCAAATAGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670884.1 |
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| CDS CAA 90 bp | TTCAGAGTGAGGATAGATCATGTTGATGCTAAAACCCAATACCCCTaGTTCATTAAAGCATTTAGAACTGGAATAGTCTTGTTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: FRVRIDHVDAKTQYP*FIKAFRTGIVLFLA Trigger: AGCAAGGAACAAGACTATTCCAGTTCTAAATGCTTTAATGAACAAGGGGTATTGGGTTTTAGCATCAACATGATCTATCCTCACTCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000464537.1 ENST00000488262.1 ENST00000653805.1 ENST00000670709.1 |
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| CDS CAA 72 bp | AGGATAGATCATGTTGATGCTAAAACCCAATACCCCTaGTTCATTAAAGCATTTAGAACTGGAATAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RIDHVDAKTQYP*FIKAFRTGIVL Trigger: CAAGACTATTCCAGTTCTAAATGCTTTAATGAACAAGGGGTATTGGGTTTTAGCATCAACATGATCTATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000464537.1 ENST00000488262.1 ENST00000653805.1 ENST00000670709.1 |
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