Pregenerated sensors for LINC02045 (Homo sapiens)
Ensembl gene IDs: ENSG00000243347Ensembl transcript IDs: ENST00000460324.2, ENST00000662134.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTGATGTTGGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCCCGCTaGCTCAGGAGTGAAGGTGCAGACCTCCACGGTGAGTGTTACAGC | + |
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Preference number: 5 (lower is better) Translates to: FDVGSFFLLVGSWSR*LRSEGADLHGECYS Trigger: GCTGTAACACTCACCGTGGAGGTCTGCACCTTCACTCCTGAGCCAGCGGGACCACGAACCCACCAGAAGGAAGAAACTCCCAACATCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS TCA 90 bp | AGTGTTACGGTTCTTAAAGGTGGCCTGTCCAGAGTTTGTTCGTTTTaGTGTTGGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SVTVLKGGLSRVCSF*CWEFLPSGGFVVPL Trigger: CAGCGGGACCACGAACCCACCAGAAGGAAGAAACTCCCAACATCAAAACGAACAAACTCTGGACAGGCCACCTTTAAGAACCGTAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS GCA 90 bp | GATGGGTGCATTTCATACCATATTAGCTTCTTCTCACATCAACTCTaGACTCGTGTCCGGAATTGGTGGGTTCTTGGTTTCACTGACTCC | + |
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Preference number: 5 (lower is better) Translates to: DGCISYHISFFSHQL*TRVRNWWVLGFTDS Trigger: GGAGTCAGTGAAACCAAGAACCCACCAATTCCGGACACGAGTGCAGAGTTGATGTGAGAAGAAGCTAATATGGTATGAAATGCACCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CCA 90 bp | GCTCACATGGCACCAAAATATGTAACCAGAGGCATATCCTCCATATaGATCTGCAGCAACCTGAGTTCTTGTCTCCTCATAAGAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: AHMAPKYVTRGISSI*ICSNLSSCLLIRKN Trigger: ATTCTTTCTTATGAGGAGACAAGAACTCAGGTTGCTGCAGATCCATATGGAGGATATGCCTCTGGTTACATATTTTGGTGCCATGTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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| CDS GCA 90 bp | ATGGCACCAAAATATGTAACCAGAGGCATATCCTCCATATGGATCTaGAGCAACCTGAGTTCTTGTCTCCTCATAAGAAAGAATATGACC | + |
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Preference number: 5 (lower is better) Translates to: MAPKYVTRGISSIWI*SNLSSCLLIRKNMT Trigger: GGTCATATTCTTTCTTATGAGGAGACAAGAACTCAGGTTGCTGCAGATCCATATGGAGGATATGCCTCTGGTTACATATTTTGGTGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CCA 90 bp | ACTCACATGGCACCAAAATATGTAACCAGAGGCATATCCTCCATATaGATCTGCAGCAACCTGAGTTCTTGTCTCCTCATAAGAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: THMAPKYVTRGISSI*ICSNLSSCLLIRKN Trigger: ATTCTTTCTTATGAGGAGACAAGAACTCAGGTTGCTGCAGATCCATATGGAGGATATGCCTCTGGTTACATATTTTGGTGCCATGTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460324.2 |
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| CDS CCA 90 bp | TTACTTTCCATTAAAAAGAGCTGGCAACTGATGCCCATAACAACTTaGATGAATCTCAAAAGCATCACGTTGAGTGAAGGAAGCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: LLSIKKSWQLMPITT*MNLKSITLSEGSHS Trigger: AGAATGGCTTCCTTCACTCAACGTGATGCTTTTGAGATTCATCCAAGTTGTTATGGGCATCAGTTGCCAGCTCTTTTTAATGGAAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460324.2 |
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| CDS CCA 90 bp | AGAGAGACTTGGAGGCTTACTCTCTTTTACCAAAGTCTCTTTCTTTaGTATTTTATCCTCAGGAGTTTGAACTCTGTAATGTACTCCACT | + |
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Preference number: 5 (lower is better) Translates to: RETWRLTLFYQSLFL*YFILRSLNSVMYST Trigger: AGTGGAGTACATTACAGAGTTCAAACTCCTGAGGATAAAATACCAAAGAAAGAGACTTTGGTAAAAGAGAGTAAGCCTCCAAGTCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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| CDS GCA 90 bp | TGGTATTTTATCCTCAGGAGTTTGAACTCTGTAATGTACTCCACTTaGTGCCATTTACAGAATCCATGTTTCCAAGTTGATTATTTGATG | + |
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Preference number: 5 (lower is better) Translates to: WYFILRSLNSVMYST*CHLQNPCFQVDYLM Trigger: CATCAAATAATCAACTTGGAAACATGGATTCTGTAAATGGCAGCAAGTGGAGTACATTACAGAGTTCAAACTCCTGAGGATAAAATACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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| CDS CCA 72 bp | GGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCCCGCTaGCTCAGGAGTGAAGGTGCAGACCTCCACGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSFFLLVGSWSR*LRSEGADLHGE Trigger: CTCACCGTGGAGGTCTGCACCTTCACTCCTGAGCCAGCGGGACCACGAACCCACCAGAAGGAAGAAACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CCA 72 bp | TTTGATGTTGGGAGTTTCTTCCTTCTGGTGGGTTCGTaGTCCCGCTGGCTCAGGAGTGAAGGTGCAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: FDVGSFFLLVGS*SRWLRSEGADL Trigger: GAGGTCTGCACCTTCACTCCTGAGCCAGCGGGACCACGAACCCACCAGAAGGAAGAAACTCCCAACATCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS TCA 72 bp | GTTCTTAAAGGTGGCCTGTCCAGAGTTTGTTCGTTTTaGTGTTGGGAGTTTCTTCCTTCTGGTGGGTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: VLKGGLSRVCSF*CWEFLPSGGFV Trigger: CACGAACCCACCAGAAGGAAGAAACTCCCAACATCAAAACGAACAAACTCTGGACAGGCCACCTTTAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CCA 72 bp | TTCTCACATCAACTCTGCACTCGTGTCCGGAATTGGTaGGTTCTTGGTTTCACTGACTCCAAGAATGAGACT | + |
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Preference number: 6 (lower is better) Translates to: FSHQLCTRVRNW*VLGFTDSKNET Trigger: AGTCTCATTCTTGGAGTCAGTGAAACCAAGAACCCACCAATTCCGGACACGAGTGCAGAGTTGATGTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CCA 72 bp | TTCTTCTCACATCAACTCTGCACTCGTGTCCGGAATTaGTGGGTTCTTGGTTTCACTGACTCCAAGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: FFSHQLCTRVRN*WVLGFTDSKNE Trigger: CTCATTCTTGGAGTCAGTGAAACCAAGAACCCACCAATTCCGGACACGAGTGCAGAGTTGATGTGAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CAA 72 bp | ATCAACTCTGCACTCGTGTCCGGAATTGGTGGGTTCTaGGTTTCACTGACTCCAAGAATGAGACTGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: INSALVSGIGGF*VSLTPRMRLQN Trigger: GTTTTGCAGTCTCATTCTTGGAGTCAGTGAAACCAAGAACCCACCAATTCCGGACACGAGTGCAGAGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS GCA 72 bp | ATTTCATACCATATTAGCTTCTTCTCACATCAACTCTaGACTCGTGTCCGGAATTGGTGGGTTCTTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISYHISFFSHQL*TRVRNWWVLGF Trigger: GAAACCAAGAACCCACCAATTCCGGACACGAGTGCAGAGTTGATGTGAGAAGAAGCTAATATGGTATGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS GCA 72 bp | AAATATGTAACCAGAGGCATATCCTCCATATGGATCTaGAGCAACCTGAGTTCTTGTCTCCTCATAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KYVTRGISSIWI*SNLSSCLLIRK Trigger: CTTTCTTATGAGGAGACAAGAACTCAGGTTGCTGCAGATCCATATGGAGGATATGCCTCTGGTTACATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CAA 72 bp | CATATCCTCCATATGGATCTGCAGCAACCTGAGTTCTaGTCTCCTCATAAGAAAGAATATGACCTTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HILHMDLQQPEF*SPHKKEYDLFH Trigger: GTGGAAAAGGTCATATTCTTTCTTATGAGGAGACAAGAACTCAGGTTGCTGCAGATCCATATGGAGGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460324.2 ENST00000662134.1 |
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| CDS CAA 72 bp | CCCATAACAACTTGGATGAATCTCAAAAGCATCACGTaGAGTGAAGGAAGCCATTCTCAAAAGGTTACGTAC | + |
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Preference number: 6 (lower is better) Translates to: PITTWMNLKSIT*SEGSHSQKVTY Trigger: GTACGTAACCTTTTGAGAATGGCTTCCTTCACTCAACGTGATGCTTTTGAGATTCATCCAAGTTGTTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460324.2 |
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| CDS CAA 90 bp | CAACTGATGCCCATAACAACTTGGATGAATCTCAAAAGCATCACGTaGAGTGAAGGAAGCCATTCTCAAAAGGTTACGTACTGTATTGTT | + |
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Preference number: 6 (lower is better) Translates to: QLMPITTWMNLKSIT*SEGSHSQKVTYCIV Trigger: AACAATACAGTACGTAACCTTTTGAGAATGGCTTCCTTCACTCAACGTGATGCTTTTGAGATTCATCCAAGTTGTTATGGGCATCAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460324.2 |
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| CDS GCA 72 bp | ATCCTCAGGAGTTTGAACTCTGTAATGTACTCCACTTaGTGCCATTTACAGAATCCATGTTTCCAAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ILRSLNSVMYST*CHLQNPCFQVD Trigger: ATCAACTTGGAAACATGGATTCTGTAAATGGCAGCAAGTGGAGTACATTACAGAGTTCAAACTCCTGAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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| CDS CCA 72 bp | ATTAAAAAGAGCTGGCAACTGATGCCCATAACAACTTaGATGAATCTCAAAAGCATCACGTTGAGTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IKKSWQLMPITT*MNLKSITLSEG Trigger: TCCTTCACTCAACGTGATGCTTTTGAGATTCATCCAAGTTGTTATGGGCATCAGTTGCCAGCTCTTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460324.2 |
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| CDS CAA 90 bp | TCCACTTGCTGCCATTTACAGAATCCATGTTTCCAAGTTGATTATTaGATGTTTCTTCAACTGAACACTCCACTTTTTCCCATCAGTACC | + |
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Preference number: 6 (lower is better) Translates to: STCCHLQNPCFQVDY*MFLQLNTPLFPIST Trigger: GGTACTGATGGGAAAAAGTGGAGTGTTCAGTTGAAGAAACATCAAATAATCAACTTGGAAACATGGATTCTGTAAATGGCAGCAAGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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| CDS TCA 72 bp | AACAACTTGGATGAATCTCAAAAGCATCACGTTGAGTaGAGGAAGCCATTCTCAAAAGGTTACGTACTGTAT | + |
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Preference number: 6 (lower is better) Translates to: NNLDESQKHHVE*RKPFSKGYVLY Trigger: ATACAGTACGTAACCTTTTGAGAATGGCTTCCTTCACTCAACGTGATGCTTTTGAGATTCATCCAAGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460324.2 |
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| CDS GCA 72 bp | CTCAGGAGTTTGAACTCTGTAATGTACTCCACTTGCTaGCATTTACAGAATCCATGTTTCCAAGTTGATTAT | + |
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Preference number: 6 (lower is better) Translates to: LRSLNSVMYSTC*HLQNPCFQVDY Trigger: ATAATCAACTTGGAAACATGGATTCTGTAAATGGCAGCAAGTGGAGTACATTACAGAGTTCAAACTCCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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| CDS CAA 72 bp | TTGGAGGCTTACTCTCTTTTACCAAAGTCTCTTTCTTaGGTATTTTATCCTCAGGAGTTTGAACTCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LEAYSLLPKSLS*VFYPQEFELCN Trigger: ATTACAGAGTTCAAACTCCTGAGGATAAAATACCAAAGAAAGAGACTTTGGTAAAAGAGAGTAAGCCTCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662134.1 |
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