Pregenerated sensors for LINC02030 (Homo sapiens)
Ensembl gene IDs: ENSG00000240708Ensembl transcript IDs: ENST00000492683.1, ENST00000654581.1, ENST00000662390.1, ENST00000670191.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCTTCCCGGCTCTCTTCTCCACAGTCATGTTGTCTTCACTTCCTaGTCAGGGCCACATTGGCTGGGCTGGTCCCAAACTTCTGACCTC | + |
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Preference number: 5 (lower is better) Translates to: SLPGSLLHSHVVFTS*SGPHWLGWSQTSDL Trigger: GAGGTCAGAAGTTTGGGACCAGCCCAGCCAATGTGGCCCTGATCAGGAAGTGAAGACAACATGACTGTGGAGAAGAGAGCCGGGAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS TCA 90 bp | GCAGAGCTTAGCTGGGTCCTCTGCTTAATGGTCTCTCACAGCACATaGAGATGTTGGCCAGGGCTGGGGACTCATCTGAGACTCGAATGG | + |
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Preference number: 5 (lower is better) Translates to: AELSWVLCLMVSHST*RCWPGLGTHLRLEW Trigger: CCATTCGAGTCTCAGATGAGTCCCCAGCCCTGGCCAACATCTTCATGTGCTGTGAGAGACCATTAAGCAGAGGACCCAGCTAAGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS TCA 90 bp | CTTGATGCTCTCACTGGGGAAGCTGGCCTAGAATGCACTCATTATTaGGCTTCTTCCCTTCCCGGCTCTCTTCTCCACAGTCATGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LDALTGEAGLECTHY*ASSLPGSLLHSHVV Trigger: GACAACATGACTGTGGAGAAGAGAGCCGGGAAGGGAAGAAGCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGTGAGAGCATCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662390.1 |
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| CDS TCA 90 bp | GGGCTTGCTCTCATGCCACTTCCCCTCATGTTCTTCCATCAACCTTaGTGCTCTCACTGGGGAAGCTGGCCTAGAATGCACTCATTATTG | + |
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Preference number: 5 (lower is better) Translates to: GLALMPLPLMFFHQP*CSHWGSWPRMHSLL Trigger: CAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGTGAGAGCATCAAGGTTGATGGAAGAACATGAGGGGAAGTGGCATGAGAGCAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662390.1 |
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| CDS CCA 90 bp | ACTTCCCCTCATGTTCTTCCATCAACCTTGATGCTCTGGGGAAGCTaGCCTAGAATGCACTCATTATTGAGCTTCTTCCCTTCCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TSPHVLPSTLMLWGS*PRMHSLLSFFPSRL Trigger: GAGCCGGGAAGGGAAGAAGCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGAGCATCAAGGTTGATGGAAGAACATGAGGGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS TCA 90 bp | TCTCTCACAGCACATGAAGATGTTGGCCAGGGCTGGGGACTCATCTaGGACTCGAATGGGGAAGGATCCACTTCCAAACTCATGGTTATT | + |
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Preference number: 5 (lower is better) Translates to: SLTAHEDVGQGWGLI*DSNGEGSTSKLMVI Trigger: AATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTCGAGTCTCAGATGAGTCCCCAGCCCTGGCCAACATCTTCATGTGCTGTGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 90 bp | AGGAAGAGCAGGACTGTGATGTCATGTGACCTACTAGCTGGGACTTaGAGATCAGCACATGGAAAAGGCATGTCTGGCTTCTGTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RKSRTVMSCDLLAGT*RSAHGKGMSGFCLC Trigger: ACAGAGACAGAAGCCAGACATGCCTTTTCCATGTGCTGATCTCCAAGTCCCAGCTAGTAGGTCACATGACATCACAGTCCTGCTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS TCA 90 bp | GGCCAGAGACTGCCCTTAGTTCCTTGCCACATGGGCCCTTCTTGCTaGTGGAAATATAGAATGTTGCAGCCATTTTGGAAACAGTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GQRLPLVPCHMGPSC*WKYRMLQPFWKQFG Trigger: GCCAAACTGTTTCCAAAATGGCTGCAACATTCTATATTTCCATCAGCAAGAAGGGCCCATGTGGCAAGGAACTAAGGGCAGTCTCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 90 bp | GATCCACTTCCAAACTCATGGTTATTGGCAGAATTCAGTTACTTGTaGGCTTTTGGCCAGAGACTGCCCTTAGTTCCTTGCCACATGGGC | + |
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Preference number: 5 (lower is better) Translates to: DPLPNSWLLAEFSYL*AFGQRLPLVPCHMG Trigger: GCCCATGTGGCAAGGAACTAAGGGCAGTCTCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 90 bp | CTGAGACTCGAATGGGGAAGGATCCACTTCCAAACTCATGGTTATTaGCAGAATTCAGTTACTTGTGGGCTTTTGGCCAGAGACTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LRLEWGRIHFQTHGY*QNSVTCGLLARDCP Trigger: AGGGCAGTCTCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTCGAGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 90 bp | TCTCATGCCACTTCCCCTCATGTTCTTCCATCAACCTTGATGCTCTaGGGAAGCTGGCCTAGAATGCACTCATTATTGAGCTTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: SHATSPHVLPSTLML*GSWPRMHSLLSFFP Trigger: AGGGAAGAAGCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGAGCATCAAGGTTGATGGAAGAACATGAGGGGAAGTGGCATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS TCA 90 bp | TGGATCCTTTGCATCATTGAGGAAGAGCAGGACTGTGATGTCATGTaGCCTACTAGCTGGGACTTGGAGATCAGCACATGGAAAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: WILCIIEEEQDCDVM*PTSWDLEISTWKRH Trigger: ATGCCTTTTCCATGTGCTGATCTCCAAGTCCCAGCTAGTAGGTCACATGACATCACAGTCCTGCTCTTCCTCAATGATGCAAAGGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS CCA 90 bp | GACTCATCTGAGACTCGAATGGGGAAGGATCCACTTCCAAACTCATaGTTATTGGCAGAATTCAGTTACTTGTGGGCTTTTGGCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: DSSETRMGKDPLPNS*LLAEFSYLWAFGQR Trigger: TCTCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTCGAGTCTCAGATGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 90 bp | GAACCAGCTTTCCTTTTTAAATCCATTCCTGGATTTCTTCTGGTCTaGAATCCAAACTGGGTGCCTCTCACGTTTACATGTAATCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: EPAFLFKSIPGFLLV*NPNWVPLTFTCNRL Trigger: CAAACGATTACATGTAAACGTGAGAGGCACCCAGTTTGGATTCCAGACCAGAAGAAATCCAGGAATGGATTTAAAAAGGAAAGCTGGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670191.1 |
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| CDS TCA 90 bp | AACAGTTTGGCAGCTCCTCAAAATGTTAAACATAGAATTACTGTATaGCTCAGCAATTCCACTCCTAAGTGTCTACCTTTCTTGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: NSLAAPQNVKHRITV*LSNSTPKCLPFLLV Trigger: CACAAGCAAGAAAGGTAGACACTTAGGAGTGGAATTGCTGAGTCATACAGTAATTCTATGTTTAACATTTTGAGGAGCTGCCAAACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 90 bp | AGAACAGGAAATCGTGAGTCCATACTAATAAAAACAATAAACATTTaGGAGAAAGGGGAGAGTCTTATCCACAAGAAGGCTGAATGTAGC | + |
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Preference number: 5 (lower is better) Translates to: RTGNRESILIKTINI*EKGESLIHKKAECS Trigger: GCTACATTCAGCCTTCTTGTGGATAAGACTCTCCCCTTTCTCCCAAATGTTTATTGTTTTTATTAGTATGGACTCACGATTTCCTGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS TCA 90 bp | AGGCTGCTAAATCCAGGGGGATATTTTAATGAGGTGCAGGATATTTaGATGGTCTCAAAGAATCTTCCCATAAATTGCTTATTAACTGCA | + |
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Preference number: 5 (lower is better) Translates to: RLLNPGGYFNEVQDI*MVSKNLPINCLLTA Trigger: TGCAGTTAATAAGCAATTTATGGGAAGATTCTTTGAGACCATTCAAATATCCTGCACCTCATTAAAATATCCCCCTGGATTTAGCAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS TCA 72 bp | GCACATGAAGATGTTGGCCAGGGCTGGGGACTCATCTaGGACTCGAATGGGGAAGGATCCACTTCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: AHEDVGQGWGLI*DSNGEGSTSKL Trigger: GAGTTTGGAAGTGGATCCTTCCCCATTCGAGTCTCAGATGAGTCCCCAGCCCTGGCCAACATCTTCATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS TCA 72 bp | GGCTCTCTTCTCCACAGTCATGTTGTCTTCACTTCCTaGTCAGGGCCACATTGGCTGGGCTGGTCCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: GSLLHSHVVFTS*SGPHWLGWSQT Trigger: AGTTTGGGACCAGCCCAGCCAATGTGGCCCTGATCAGGAAGTGAAGACAACATGACTGTGGAGAAGAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS CAA 72 bp | TGTCTGGCTTCTGTCTCTGTAGAGGAGAGCACGGGCTaGCTCTCATGCCACTTCCCCTCATGTTCTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: CLASVSVEESTG*LSCHFPSCSSI Trigger: GATGGAAGAACATGAGGGGAAGTGGCATGAGAGCAAGCCCGTGCTCTCCTCTACAGAGACAGAAGCCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS CAA 90 bp | ATTATTGAGCTTCTTCCCTTCCCGGCTCTCTTCTCCACAGTCATGTaGTCTTCACTTCCTGATCAGGGCCACATTGGCTGGGCTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: IIELLPFPALFSTVM*SSLPDQGHIGWAGP Trigger: GGGACCAGCCCAGCCAATGTGGCCCTGATCAGGAAGTGAAGACAACATGACTGTGGAGAAGAGAGCCGGGAAGGGAAGAAGCTCAATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS TCA 72 bp | CATTGGCTGGGCTGGTCCCAAACTTCTGACCTCAAGTaGTTCACCCATGTTGACCTCCCAAACTGCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HWLGWSQTSDLK*FTHVDLPNCWD Trigger: ATCCCAGCAGTTTGGGAGGTCAACATGGGTGAATCACTTGAGGTCAGAAGTTTGGGACCAGCCCAGCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS TCA 72 bp | TGCTCTGGGGAAGCTGGCCTAGAATGCACTCATTATTaGGCTTCTTCCCTTCCCGGCTCTCTTCTCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: CSGEAGLECTHY*ASSLPGSLLHS Trigger: ACTGTGGAGAAGAGAGCCGGGAAGGGAAGAAGCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS TCA 72 bp | CTCACTGGGGAAGCTGGCCTAGAATGCACTCATTATTaGGCTTCTTCCCTTCCCGGCTCTCTTCTCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: LTGEAGLECTHY*ASSLPGSLLHS Trigger: ACTGTGGAGAAGAGAGCCGGGAAGGGAAGAAGCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662390.1 |
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| CDS TCA 72 bp | CTCATGCCACTTCCCCTCATGTTCTTCCATCAACCTTaGTGCTCTCACTGGGGAAGCTGGCCTAGAATGCAC | + |
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Preference number: 6 (lower is better) Translates to: LMPLPLMFFHQP*CSHWGSWPRMH Trigger: GTGCATTCTAGGCCAGCTTCCCCAGTGAGAGCATCAAGGTTGATGGAAGAACATGAGGGGAAGTGGCATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662390.1 |
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| CDS CAA 90 bp | CGGGCTTGCTCTCATGCCACTTCCCCTCATGTTCTTCCATCAACCTaGATGCTCTGGGGAAGCTGGCCTAGAATGCACTCATTATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RACSHATSPHVLPST*MLWGSWPRMHSLLS Trigger: GCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGAGCATCAAGGTTGATGGAAGAACATGAGGGGAAGTGGCATGAGAGCAAGCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS CAA 90 bp | GAAAAGGCATGTCTGGCTTCTGTCTCTGTAGAGGAGAGCACGGGCTaGCTCTCATGCCACTTCCCCTCATGTTCTTCCATCAACCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: EKACLASVSVEESTG*LSCHFPSCSSINLD Trigger: ATCAAGGTTGATGGAAGAACATGAGGGGAAGTGGCATGAGAGCAAGCCCGTGCTCTCCTCTACAGAGACAGAAGCCAGACATGCCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS TCA 72 bp | CTACCTTTCTTGCTTGTGTCACAGTCCAATGTAGAGTaGGCTCCATGCAGTCATTCAGGGACCCAGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LPFLLVSQSNVE*APCSHSGTQAP Trigger: AGGTGCCTGGGTCCCTGAATGACTGCATGGAGCTCACTCTACATTGGACTGTGACACAAGCAAGAAAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS TCA 72 bp | TGCATCATTGAGGAAGAGCAGGACTGTGATGTCATGTaGCCTACTAGCTGGGACTTGGAGATCAGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: CIIEEEQDCDVM*PTSWDLEISTW Trigger: CCATGTGCTGATCTCCAAGTCCCAGCTAGTAGGTCACATGACATCACAGTCCTGCTCTTCCTCAATGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS CCA 72 bp | AGGACTGTGATGTCATGTGACCTACTAGCTGGGACTTaGAGATCAGCACATGGAAAAGGCATGTCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTVMSCDLLAGT*RSAHGKGMSGF Trigger: GAAGCCAGACATGCCTTTTCCATGTGCTGATCTCCAAGTCCCAGCTAGTAGGTCACATGACATCACAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654581.1 ENST00000662390.1 |
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| CDS CAA 90 bp | TCTGAGACTCGAATGGGGAAGGATCCACTTCCAAACTCATGGTTATaGGCAGAATTCAGTTACTTGTGGGCTTTTGGCCAGAGACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SETRMGKDPLPNSWL*AEFSYLWAFGQRLP Trigger: GGGCAGTCTCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTCGAGTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | ATGGTTATTGGCAGAATTCAGTTACTTGTGGGCTTTTaGCCAGAGACTGCCCTTAGTTCCTTGCCACATGGG | + |
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Preference number: 6 (lower is better) Translates to: MVIGRIQLLVGF*PETALSSLPHG Trigger: CCCATGTGGCAAGGAACTAAGGGCAGTCTCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | ACTTCCCCTCATGTTCTTCCATCAACCTTGATGCTCTaGGGAAGCTGGCCTAGAATGCACTCATTATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TSPHVLPSTLML*GSWPRMHSLLS Trigger: GCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGAGCATCAAGGTTGATGGAAGAACATGAGGGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS CCA 72 bp | CCAAACTCATGGTTATTGGCAGAATTCAGTTACTTGTaGGCTTTTGGCCAGAGACTGCCCTTAGTTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PNSWLLAEFSYL*AFGQRLPLVPC Trigger: GCAAGGAACTAAGGGCAGTCTCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | CACACACTTAGTATCTTTTTCTGTGGATTGAGCATCTaGGCAGAGCTTAGCTGGGTCCTCTGCTTAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: HTLSIFFCGLSI*AELSWVLCLMV Trigger: GACCATTAAGCAGAGGACCCAGCTAAGCTCTGCCCAGATGCTCAATCCACAGAAAAAGATACTAAGTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | CATGTTCTTCCATCAACCTTGATGCTCTGGGGAAGCTaGCCTAGAATGCACTCATTATTGAGCTTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HVLPSTLMLWGS*PRMHSLLSFFP Trigger: AGGGAAGAAGCTCAATAATGAGTGCATTCTAGGCCAGCTTCCCCAGAGCATCAAGGTTGATGGAAGAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654581.1 |
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| CDS CAA 72 bp | CGAATGGGGAAGGATCCACTTCCAAACTCATGGTTATaGGCAGAATTCAGTTACTTGTGGGCTTTTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RMGKDPLPNSWL*AEFSYLWAFGQ Trigger: CTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS TCA 72 bp | CTGCCCTTAGTTCCTTGCCACATGGGCCCTTCTTGCTaGTGGAAATATAGAATGTTGCAGCCATTTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LPLVPCHMGPSC*WKYRMLQPFWK Trigger: TTTCCAAAATGGCTGCAACATTCTATATTTCCATCAGCAAGAAGGGCCCATGTGGCAAGGAACTAAGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | GAATGGGGAAGGATCCACTTCCAAACTCATGGTTATTaGCAGAATTCAGTTACTTGTGGGCTTTTGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: EWGRIHFQTHGY*QNSVTCGLLAR Trigger: TCTGGCCAAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | GAGACTCGAATGGGGAAGGATCCACTTCCAAACTCATaGTTATTGGCAGAATTCAGTTACTTGTGGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ETRMGKDPLPNS*LLAEFSYLWAF Trigger: AAAAGCCCACAAGTAACTGAATTCTGCCAATAACCATGAGTTTGGAAGTGGATCCTTCCCCATTCGAGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS TCA 72 bp | CTTACCCTTAGACTGAACAATCTCAGGTCTGGGAATTaGTCCCAAAATACATCTCTGATTGTAGGCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LTLRLNNLRSGN*SQNTSLIVGTR Trigger: CCTTGTGCCTACAATCAGAGATGTATTTTGGGATCAATTCCCAGACCTGAGATTGTTCAGTCTAAGGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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| CDS CCA 72 bp | AGTAGTAAATACACAGGAAGAAATGGGATAGCACTTTaGGTAATCAACAGCAGCATCACCAATGGCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: SSKYTGRNGIAL*VINSSITNGHC Trigger: ACAATGGCCATTGGTGATGCTGCTGTTGATTACCCAAAGTGCTATCCCATTTCTTCCTGTGTATTTACTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS CAA 72 bp | GGGTCCTTGTTAAAGTGCATATCTTGTGCCCAAATTTaGGTCTCTAATACCTTTGTCCACTTGAAAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GSLLKCISCAQI*VSNTFVHLKEP Trigger: TGGTTCTTTCAAGTGGACAAAGGTATTAGAGACCAAAATTTGGGCACAAGATATGCACTTTAACAAGGACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS CAA 72 bp | TGTGCCCAAATTTTGGTCTCTAATACCTTTGTCCACTaGAAAGAACCACAGTTTTTCAGAGAAATGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CAQILVSNTFVH*KEPQFFREMAD Trigger: ATCAGCCATTTCTCTGAAAAACTGTGGTTCTTTCAAGTGGACAAAGGTATTAGAGACCAAAATTTGGGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS CCA 72 bp | AATCGTGAGTCCATACTAATAAAAACAATAAACATTTaGGAGAAAGGGGAGAGTCTTATCCACAAGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NRESILIKTINI*EKGESLIHKKA Trigger: AGCCTTCTTGTGGATAAGACTCTCCCCTTTCTCCCAAATGTTTATTGTTTTTATTAGTATGGACTCACGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS TCA 72 bp | AATCCAGGGGGATATTTTAATGAGGTGCAGGATATTTaGATGGTCTCAAAGAATCTTCCCATAAATTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: NPGGYFNEVQDI*MVSKNLPINCL Trigger: TAAGCAATTTATGGGAAGATTCTTTGAGACCATTCAAATATCCTGCACCTCATTAAAATATCCCCCTGGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492683.1 |
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| CDS CAA 72 bp | GGAAATATAGAATGTTGCAGCCATTTTGGAAACAGTTaGGCAGCTCCTCAAAATGTTAAACATAGAATTACT | + |
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Preference number: 6 (lower is better) Translates to: GNIECCSHFGNS*AAPQNVKHRIT Trigger: AGTAATTCTATGTTTAACATTTTGAGGAGCTGCCAAACTGTTTCCAAAATGGCTGCAACATTCTATATTTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000492683.1 ENST00000654581.1 ENST00000662390.1 ENST00000670191.1 |
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