Pregenerated sensors for LINC02022 (Homo sapiens)

Ensembl gene IDs: ENSG00000232746

Ensembl transcript IDs: ENST00000448129.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTTGGCATAGAGATCTGGGCTGAAGGGTACTGGCCAGCTGGCAAATaGCACGGAGTTCAGCCTTGTCCTCACACAGCGAGGGAAGGACGG	+
Preference number: 5 (lower is better) Translates to: LGIEIWAEGYWPAGK*HGVQPCPHTAREGR Trigger: CCGTCCTTCCCTCGCTGTGTGAGGACAAGGCTGAACTCCGTGTCATTTGCCAGCTGGCCAGTACCCTTCAGCCCAGATCTCTATGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448129.1
CDS TCA 72 bp	GAGATCTGGGCTGAAGGGTACTGGCCAGCTGGCAAATaGCACGGAGTTCAGCCTTGTCCTCACACAGCGAGG	+
Preference number: 6 (lower is better) Translates to: EIWAEGYWPAGK*HGVQPCPHTAR Trigger: CCTCGCTGTGTGAGGACAAGGCTGAACTCCGTGTCATTTGCCAGCTGGCCAGTACCCTTCAGCCCAGATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448129.1
CDS CAA 72 bp	GCAGGAAGTGGGGCAGCACACACAGCGCGAGTTGTTTaGTGTATGAACGGCCAGGCGACGGTGTCTGAACAT	+
Preference number: 6 (lower is better) Translates to: AGSGAAHTARVV*CMNGQATVSEH Trigger: ATGTTCAGACACCGTCGCCTGGCCGTTCATACACAAAACAACTCGCGCTGTGTGTGCTGCCCCACTTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448129.1
CDS TCA 72 bp	GTGGGGCAGCACACACAGCGCGAGTTGTTTTGTGTATaGACGGCCAGGCGACGGTGTCTGAACATCTTTCCT	+
Preference number: 6 (lower is better) Translates to: VGQHTQRELFCV*TARRRCLNIFP Trigger: AGGAAAGATGTTCAGACACCGTCGCCTGGCCGTTCATACACAAAACAACTCGCGCTGTGTGTGCTGCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448129.1
CDS CAA 72 bp	GGCCAGGCGACGGTGTCTGAACATCTTTCCTTAATTTaGCGAACGGAAACAGGGCACGATGAACCTGGGAAC	+
Preference number: 6 (lower is better) Translates to: GQATVSEHLSLI*RTETGHDEPGN Trigger: GTTCCCAGGTTCATCGTGCCCTGTTTCCGTTCGCAAAATTAAGGAAAGATGTTCAGACACCGTCGCCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448129.1
CDS TCA 72 bp	AGTTGTTTTGTGTATGAACGGCCAGGCGACGGTGTCTaGACATCTTTCCTTAATTTTGCGAACGGAAACAGG	+
Preference number: 6 (lower is better) Translates to: SCFVYERPGDGV*TSFLNFANGNR Trigger: CCTGTTTCCGTTCGCAAAATTAAGGAAAGATGTTCAGACACCGTCGCCTGGCCGTTCATACACAAAACAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448129.1

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