Pregenerated sensors for LINC02019 (Homo sapiens)
Ensembl gene IDs: ENSG00000273356Ensembl transcript IDs: ENST00000608605.1, ENST00000609204.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTCTTGCTACTGAAGTCGGCAAGCAGTGGATAAGTGGCACACGATaGTCATTCTCAAGAGTTTCTGGCAGCGGTGCCAACACAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: ALATEVGKQWISGTR*SFSRVSGSGANTAL Trigger: GAGTGCTGTGTTGGCACCGCTGCCAGAAACTCTTGAGAATGAGCATCGTGTGCCACTTATCCACTGCTTGCCGACTTCAGTAGCAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS GCA 90 bp | GATAAGTGGCACACGATGCTCATTCTCAAGAGTTTCTGGCAGCGGTaGCAACACAGCACTCACTTCCCTCTCTCAGCAGTTGATTTCATC | + |
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Preference number: 5 (lower is better) Translates to: DKWHTMLILKSFWQR*QHSTHFPLSAVDFI Trigger: GATGAAATCAACTGCTGAGAGAGGGAAGTGAGTGCTGTGTTGGCACCGCTGCCAGAAACTCTTGAGAATGAGCATCGTGTGCCACTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS GCA 90 bp | CCAGATGTTTCCAGATGTGTCAGAGAATTCCCAGCACTTGCTTGCTaGCCACTTGACTGTGAGCTACCTGGAGACAGCACCATGCTATAT | + |
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Preference number: 5 (lower is better) Translates to: PDVSRCVREFPALAC*PLDCELPGDSTMLY Trigger: ATATAGCATGGTGCTGTCTCCAGGTAGCTCACAGTCAAGTGGGCAGCAAGCAAGTGCTGGGAATTCTCTGACACATCTGGAAACATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS CCA 90 bp | AATGGAAGACTTAAGAACACGTTACCCAACTTACCTCTGCCCTTCTaGGTTCCTCAAGGAGGGGGTCTGCTGTGGTTAGTAAAACGTCTG | + |
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Preference number: 5 (lower is better) Translates to: NGRLKNTLPNLPLPF*VPQGGGLLWLVKRL Trigger: CAGACGTTTTACTAACCACAGCAGACCCCCTCCTTGAGGAACCCAGAAGGGCAGAGGTAAGTTGGGTAACGTGTTCTTAAGTCTTCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS GCA 90 bp | ATAGAGGCAAATCCAAACAAAGTGCAGGTGATAGTGGTGACATTCTaGCTTCTCTTGATCAGAAGGTGTCAGCAGCTGGAGCTTATCCCC | + |
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Preference number: 5 (lower is better) Translates to: IEANPNKVQVIVVTF*LLLIRRCQQLELIP Trigger: GGGGATAAGCTCCAGCTGCTGACACCTTCTGATCAAGAGAAGGCAGAATGTCACCACTATCACCTGCACTTTGTTTGGATTTGCCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS TCA 90 bp | TCAGCTCATAAAACAATGTGTGGCCACAAAGATGATGTTTATCCATaGGCATTCTGGAGGCTCTTGCTACTGAAGTCGGCAAGCAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SAHKTMCGHKDDVYP*AFWRLLLLKSASSG Trigger: TCCACTGCTTGCCGACTTCAGTAGCAAGAGCCTCCAGAATGCTCATGGATAAACATCATCTTTGTGGCCACACATTGTTTTATGAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS TCA 90 bp | ACAAGCAAACTCCATAATGGTAAATCCCCCATCACCTTTGGTGAATaGTACTGGCCCTCTACAAAGCTCGATGAGATACACTTCATATCT | + |
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Preference number: 5 (lower is better) Translates to: TSKLHNGKSPITFGE*YWPSTKLDEIHFIS Trigger: AGATATGAAGTGTATCTCATCGAGCTTTGTAGAGGGCCAGTATCATTCACCAAAGGTGATGGGGGATTTACCATTATGGAGTTTGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS GCA 72 bp | TCCAGATGTGTCAGAGAATTCCCAGCACTTGCTTGCTaGCCACTTGACTGTGAGCTACCTGGAGACAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SRCVREFPALAC*PLDCELPGDST Trigger: GGTGCTGTCTCCAGGTAGCTCACAGTCAAGTGGGCAGCAAGCAAGTGCTGGGAATTCTCTGACACATCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS GCA 72 bp | ACTGAAGTCGGCAAGCAGTGGATAAGTGGCACACGATaGTCATTCTCAAGAGTTTCTGGCAGCGGTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TEVGKQWISGTR*SFSRVSGSGAN Trigger: GTTGGCACCGCTGCCAGAAACTCTTGAGAATGAGCATCGTGTGCCACTTATCCACTGCTTGCCGACTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS CCA 72 bp | GATAAGTGGCACACGATGCTCATTCTCAAGAGTTTCTaGCAGCGGTGCCAACACAGCACTCACTTCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: DKWHTMLILKSF*QRCQHSTHFPL Trigger: GAGAGGGAAGTGAGTGCTGTGTTGGCACCGCTGCCAGAAACTCTTGAGAATGAGCATCGTGTGCCACTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS CCA 72 bp | CTTAAGAACACGTTACCCAACTTACCTCTGCCCTTCTaGGTTCCTCAAGGAGGGGGTCTGCTGTGGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: LKNTLPNLPLPF*VPQGGGLLWLV Trigger: TACTAACCACAGCAGACCCCCTCCTTGAGGAACCCAGAAGGGCAGAGGTAAGTTGGGTAACGTGTTCTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS CAA 72 bp | AAAGTGCAGGTGATAGTGGTGACATTCTGCCTTCTCTaGATCAGAAGGTGTCAGCAGCTGGAGCTTATCCCC | + |
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Preference number: 6 (lower is better) Translates to: KVQVIVVTFCLL*IRRCQQLELIP Trigger: GGGGATAAGCTCCAGCTGCTGACACCTTCTGATCAAGAGAAGGCAGAATGTCACCACTATCACCTGCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS CCA 72 bp | ATTCTGGAGGCTCTTGCTACTGAAGTCGGCAAGCAGTaGATAAGTGGCACACGATGCTCATTCTCAAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: ILEALATEVGKQ*ISGTRCSFSRV Trigger: AACTCTTGAGAATGAGCATCGTGTGCCACTTATCCACTGCTTGCCGACTTCAGTAGCAAGAGCCTCCAGAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS CAA 90 bp | TTTCCAGATGTGTCAGAGAATTCCCAGCACTTGCTTGCTGCCCACTaGACTGTGAGCTACCTGGAGACAGCACCATGCTATATTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FPDVSENSQHLLAAH*TVSYLETAPCYILF Trigger: AAAAAGAATATAGCATGGTGCTGTCTCCAGGTAGCTCACAGTCAAGTGGGCAGCAAGCAAGTGCTGGGAATTCTCTGACACATCTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS GCA 72 bp | AATCCAAACAAAGTGCAGGTGATAGTGGTGACATTCTaGCTTCTCTTGATCAGAAGGTGTCAGCAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: NPNKVQVIVVTF*LLLIRRCQQLE Trigger: CTCCAGCTGCTGACACCTTCTGATCAAGAGAAGGCAGAATGTCACCACTATCACCTGCACTTTGTTTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS TCA 72 bp | CTCCATAATGGTAAATCCCCCATCACCTTTGGTGAATaGTACTGGCCCTCTACAAAGCTCGATGAGATACAC | + |
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Preference number: 6 (lower is better) Translates to: LHNGKSPITFGE*YWPSTKLDEIH Trigger: GTGTATCTCATCGAGCTTTGTAGAGGGCCAGTATCATTCACCAAAGGTGATGGGGGATTTACCATTATGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS CAA 72 bp | CAAGCAAACTCCATAATGGTAAATCCCCCATCACCTTaGGTGAATGATACTGGCCCTCTACAAAGCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: QANSIMVNPPSP*VNDTGPLQSSM Trigger: CATCGAGCTTTGTAGAGGGCCAGTATCATTCACCAAAGGTGATGGGGGATTTACCATTATGGAGTTTGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS TCA 72 bp | AAAACAATGTGTGGCCACAAAGATGATGTTTATCCATaGGCATTCTGGAGGCTCTTGCTACTGAAGTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: KTMCGHKDDVYP*AFWRLLLLKSA Trigger: TGCCGACTTCAGTAGCAAGAGCCTCCAGAATGCTCATGGATAAACATCATCTTTGTGGCCACACATTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS TCA 72 bp | ATGGCCAAAGCTCTCCTGATTTTAATTCGTGGAGACTaGTGTGGCACTTCTGGATGGGCTCTAATGAATAAG | + |
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Preference number: 6 (lower is better) Translates to: MAKALLILIRGD*CGTSGWALMNK Trigger: CTTATTCATTAGAGCCCATCCAGAAGTGCCACATCAGTCTCCACGAATTAAAATCAGGAGAGCTTTGGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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| CDS CAA 90 bp | TTTTTATCACAAGCAAACTCCATAATGGTAAATCCCCCATCACCTTaGGTGAATGATACTGGCCCTCTACAAAGCTCGATGAGATACACT | + |
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Preference number: 6 (lower is better) Translates to: FLSQANSIMVNPPSP*VNDTGPLQSSMRYT Trigger: AGTGTATCTCATCGAGCTTTGTAGAGGGCCAGTATCATTCACCAAAGGTGATGGGGGATTTACCATTATGGAGTTTGCTTGTGATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000608605.1 ENST00000609204.1 |
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| CDS TCA 72 bp | AATGTGGATTTCTTTCAGTTAGCCAAGGTCTTCAAATaGGAAATGGCCAAAGCTCTCCTGATTTTAATTCGT | + |
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Preference number: 6 (lower is better) Translates to: NVDFFQLAKVFK*EMAKALLILIR Trigger: ACGAATTAAAATCAGGAGAGCTTTGGCCATTTCTCATTTGAAGACCTTGGCTAACTGAAAGAAATCCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608605.1 |
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