Pregenerated sensors for LINC01992 (Homo sapiens)
Ensembl gene IDs: ENSG00000260019Ensembl transcript IDs: ENST00000567574.1, ENST00000654644.1, ENST00000660253.1, ENST00000661257.1, ENST00000666961.1, ENST00000668365.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTGGCAAGGCAGCTGGGACCCCAGATTCAGACCGCCAAGAGTCTTaGGCCTTCAGTAGTCGGAGTCCTGGCTTTGAAGACAAGCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PGKAAGTPDSDRQES*AFSSRSPGFEDKQS Trigger: GGACTGCTTGTCTTCAAAGCCAGGACTCCGACTACTGAAGGCCCAAGACTCTTGGCGGTCTGAATCTGGGGTCCCAGCTGCCTTGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661257.1 |
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| CDS GCA 90 bp | CGGAGCTGGGCTGAGATTAGGGTGATGCGTCTGCAGGCCAAAGAATaGCAAAGACTGCCAGCACACCACCAGAAACTGGGGGAGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: RSWAEIRVMRLQAKE*QRLPAHHQKLGERH Trigger: ATGCCTCTCCCCCAGTTTCTGGTGGTGTGCTGGCAGTCTTTGGCATTCTTTGGCCTGCAGACGCATCACCCTAATCTCAGCCCAGCTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 90 bp | CACCAAACATGGGAAAGGCGTTCCGGAGCTGGGCTGAGATTAGGGTaGTGCGTCTGCAGGCCAAAGAATGCCAAAGACTGCCAGCACACC | + |
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Preference number: 5 (lower is better) Translates to: HQTWERRSGAGLRLG*CVCRPKNAKDCQHT Trigger: GGTGTGCTGGCAGTCTTTGGCATTCTTTGGCCTGCAGACGCATCACCCTAATCTCAGCCCAGCTCCGGAACGCCTTTCCCATGTTTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | GGAACTTCTAAGACACCTGCATTAGTGGAGAGATATCTGCCATCCTaGCAAGGCAGCTGGGACCCCAGATTCAGACCGCCAAGAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GTSKTPALVERYLPS*QGSWDPRFRPPRVL Trigger: CAAGACTCTTGGCGGTCTGAATCTGGGGTCCCAGCTGCCTTGCCAGGATGGCAGATATCTCTCCACTAATGCAGGTGTCTTAGAAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660253.1 ENST00000661257.1 |
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| CDS GCA 90 bp | TTCCTTCGTCAGCTCCGACAGACCAACCAGCATCCCCCTCCCACTTaGCACTTTGATAGGGGTGACTGGTATCTCCATCTCCTTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: FLRQLRQTNQHPPPT*HFDRGDWYLHLLIF Trigger: AAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAGTGGGAGGGGGATGCTGGTTGGTCTGTCGGAGCTGACGAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | TGCAGGCCAAAGAATGCCAAAGACTGCCAGCACACCACCAGAAACTaGGGGAGAGGCATGGAACGGATTCTTCTTCACAGCTCTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: CRPKNAKDCQHTTRN*GRGMERILLHSSQK Trigger: TTTCTGAGAGCTGTGAAGAAGAATCCGTTCCATGCCTCTCCCCCAGTTTCTGGTGGTGTGCTGGCAGTCTTTGGCATTCTTTGGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | TGGGCCTTCAGTAGTCGGAGTCCTGGCTTTGAAGACAAGCAGTCCTaGGTGCCAGAGTCAGCAGCGCTCCTGTTTATTAACTATTTGACT | + |
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Preference number: 5 (lower is better) Translates to: WAFSSRSPGFEDKQS*VPESAALLFINYLT Trigger: AGTCAAATAGTTAATAAACAGGAGCGCTGCTGACTCTGGCACCCAGGACTGCTTGTCTTCAAAGCCAGGACTCCGACTACTGAAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661257.1 |
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| CDS TCA 90 bp | ATTTCCACCTTGTTCGCTTGTAACCGCTCTCACCAGGCAAAGTTCTaGGCAAGTGAGATGGACTCATCTCGGAACTCCAGGCTGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: ISTLFACNRSHQAKF*ASEMDSSRNSRLCL Trigger: TAAACACAGCCTGGAGTTCCGAGATGAGTCCATCTCACTTGCTCAGAACTTTGCCTGGTGAGAGCGGTTACAAGCGAACAAGGTGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | AAAATTCTGGAGACCAGAAGTCCAAGATCAAGGTTTCAGCCAATTTaGTTTGTGGTGAGGGTTCTCTTCCCAGCTGGTAGATGGGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: KILETRSPRSRFQPI*FVVRVLFPAGRWAA Trigger: AGCGGCCCATCTACCAGCTGGGAAGAGAACCCTCACCACAAACCAAATTGGCTGAAACCTTGATCTTGGACTTCTGGTCTCCAGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567574.1 |
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| CDS CCA 90 bp | ACCAACCAGCATCCCCCTCCCACTTGCCACTTTGATAGGGGTGACTaGTATCTCCATCTCCTTATCTTTGTTGATCATGTTTCTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: TNQHPPPTCHFDRGD*YLHLLIFVDHVSGF Trigger: AAACCCAGAAACATGATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAGTGGGAGGGGGATGCTGGTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | CTTGGAATTCTAGCCACTGGAACTGGCTTTGAAGACAAGCAGTCCTaGGTGCCAGAGTCAGCAGCGCTCCTGTTTATTAACTATTTGACT | + |
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Preference number: 5 (lower is better) Translates to: LGILATGTGFEDKQS*VPESAALLFINYLT Trigger: AGTCAAATAGTTAATAAACAGGAGCGCTGCTGACTCTGGCACCCAGGACTGCTTGTCTTCAAAGCCAGTTCCAGTGGCTAGAATTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668365.1 |
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| CDS CCA 90 bp | TCGCTTGTAACCGCTCTCACCAGGCAAAGTTCTGAGCAAGTGAGATaGACTCATCTCGGAACTCCAGGCTGTGTTTACATAATTGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SLVTALTRQSSEQVR*THLGTPGCVYIIGK Trigger: TTTACCAATTATGTAAACACAGCCTGGAGTTCCGAGATGAGTCCATCTCACTTGCTCAGAACTTTGCCTGGTGAGAGCGGTTACAAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 90 bp | ATGGAACGGATTCTTCTTCACAGCTCTCAGAAAGAACCATGCTGCTaGCACCTTGATCTTGGAATTCTAGCCACTGGAACTGGCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: MERILLHSSQKEPCC*HLDLGILATGTGFE Trigger: TTCAAAGCCAGTTCCAGTGGCTAGAATTCCAAGATCAAGGTGTCAGCAGCATGGTTCTTTCTGAGAGCTGTGAAGAAGAATCCGTTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668365.1 |
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| CDS TCA 90 bp | ATGGAACGGATTCTTCTTCACAGCTCTCAGAAAGAACCATGCTGCTaGCACCTTGATCTTGGAATTCTAGCCACTGGAACTACATTTAGG | + |
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Preference number: 5 (lower is better) Translates to: MERILLHSSQKEPCC*HLDLGILATGTTFR Trigger: CCTAAATGTAGTTCCAGTGGCTAGAATTCCAAGATCAAGGTGTCAGCAGCATGGTTCTTTCTGAGAGCTGTGAAGAAGAATCCGTTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654644.1 |
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| CDS TCA 90 bp | AGTGAATCAGATCTTCAGGGAGGGGCTCAGAATCTGTATGCTGAATaGGTGTTCCAAGTGGTTCTTTTGACCTTATGGGAAATGCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SESDLQGGAQNLYAE*VFQVVLLTLWEMLS Trigger: ACTGAGCATTTCCCATAAGGTCAAAAGAACCACTTGGAACACTCATTCAGCATACAGATTCTGAGCCCCTCCCTGAAGATCTGATTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS CCA 90 bp | CTATTTCCCATAATATATGCCAGTGGAGGGCTCCTGTTAAATCTATaGGTTCCAGGACTTTACACCAAGCCTAGTGAATCAGATCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LFPIIYASGGLLLNL*VPGLYTKPSESDLQ Trigger: CTGAAGATCTGATTCACTAGGCTTGGTGTAAAGTCCTGGAACCCATAGATTTAACAGGAGCCCTCCACTGGCATATATTATGGGAAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS TCA 90 bp | TCAACACCTGAATTCTGGAGTGGACTCATTCAAACCATAGTCATCTaGGAGAATGAAGTCATCATGGAAAAAGGAGAAGCGACAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: STPEFWSGLIQTIVI*ENEVIMEKGEATKG Trigger: GCCTTTTGTCGCTTCTCCTTTTTCCATGATGACTTCATTCTCTCAGATGACTATGGTTTGAATGAGTCCACTCCAGAATTCAGGTGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666961.1 |
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| CDS CCA 90 bp | ACATGCAGATGTCCTATTGAGACTTTGCCCATAAGGGAGCGTCTTTaGTGCTTAAAATTCCATCTTTTGGACCTCATATCAGTTGATGTT | + |
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Preference number: 5 (lower is better) Translates to: TCRCPIETLPIRERL*CLKFHLLDLISVDV Trigger: AACATCAACTGATATGAGGTCCAAAAGATGGAATTTTAAGCACCAAAGACGCTCCCTTATGGGCAAAGTCTCAATAGGACATCTGCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | ACCTCTCTGGAGACACAGGATCTTATTCAACCTCACACAGATTCTTaGGTTTCTGCCATTCACATCTACATTGAAAATTCTCCCATAAAC | + |
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Preference number: 5 (lower is better) Translates to: TSLETQDLIQPHTDS*VSAIHIYIENSPIN Trigger: GTTTATGGGAGAATTTTCAATGTAGATGTGAATGGCAGAAACCCAAGAATCTGTGTGAGGTTGAATAAGATCCTGTGTCTCCAGAGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS GCA 90 bp | TGCAGATGTCCTATTGAGACTTTGCCCATAAGGGAGCGTCTTTGGTaGTTAAAATTCCATCTTTTGGACCTCATATCAGTTGATGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: CRCPIETLPIRERLW*LKFHLLDLISVDVF Trigger: AAAAACATCAACTGATATGAGGTCCAAAAGATGGAATTTTAAGCACCAAAGACGCTCCCTTATGGGCAAAGTCTCAATAGGACATCTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 90 bp | TGTTTGTTTAATAACAGCCTTCATTTAGATCTTTGCAAACAGCCTTaGATGAGGAATGTCCTTATGTTTCAGGGAACATATCAGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: CLFNNSLHLDLCKQP*MRNVLMFQGTYQAW Trigger: CCAGGCCTGATATGTTCCCTGAAACATAAGGACATTCCTCATTCAAGGCTGTTTGCAAAGATCTAAATGAAGGCTGTTATTAAACAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS CCA 90 bp | TCTTTGTTGATCATGTTTCTGGGTTTCCAATTGCGTCAATTTAACTaGTTGCCAATAATTCTGTCATCTGAGGGGAAAGCAGAATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SLLIMFLGFQLRQFN*LPIILSSEGKAESQ Trigger: TTGAGATTCTGCTTTCCCCTCAGATGACAGAATTATTGGCAACCAGTTAAATTGACGCAATTGGAAACCCAGAAACATGATCAACAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 90 bp | GAAGCCTCTTTTATAAGAGCCTTCATTTATAAGAAAGAAGCTTCATaGCCTATTCACCTCTTAAAGGCCCTATCTCTAATACTATCACAT | + |
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Preference number: 5 (lower is better) Translates to: EASFIRAFIYKKEAS*PIHLLKALSLILSH Trigger: ATGTGATAGTATTAGAGATAGGGCCTTTAAGAGGTGAATAGGCCATGAAGCTTCTTTCTTATAAATGAAGGCTCTTATAAAAGAGGCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666961.1 |
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| CDS CCA 72 bp | GCAGCTGGGACCCCAGATTCAGACCGCCAAGAGTCTTaGGCCTTCAGTAGTCGGAGTCCTGGCTTTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: AAGTPDSDRQES*AFSSRSPGFED Trigger: GTCTTCAAAGCCAGGACTCCGACTACTGAAGGCCCAAGACTCTTGGCGGTCTGAATCTGGGGTCCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661257.1 |
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| CDS TCA 72 bp | TGGGAAAGGCGTTCCGGAGCTGGGCTGAGATTAGGGTaGTGCGTCTGCAGGCCAAAGAATGCCAAAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: WERRSGAGLRLG*CVCRPKNAKDC Trigger: GCAGTCTTTGGCATTCTTTGGCCTGCAGACGCATCACCCTAATCTCAGCCCAGCTCCGGAACGCCTTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS GCA 72 bp | CAGCTCCGACAGACCAACCAGCATCCCCCTCCCACTTaGCACTTTGATAGGGGTGACTGGTATCTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: QLRQTNQHPPPT*HFDRGDWYLHL Trigger: GAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAGTGGGAGGGGGATGCTGGTTGGTCTGTCGGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 72 bp | TTAGTGGAGAGATATCTGCCATCCTGGCAAGGCAGCTaGGACCCCAGATTCAGACCGCCAAGAGTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVERYLPSWQGS*DPRFRPPRVLG Trigger: GCCCAAGACTCTTGGCGGTCTGAATCTGGGGTCCCAGCTGCCTTGCCAGGATGGCAGATATCTCTCCACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660253.1 ENST00000661257.1 |
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| CDS CCA 72 bp | GCATCCTCCAGAGAAGAGGAATCGTGTGTCCTCACATaGCAGAAGACAGAAGGGCAAGGGAGCCACATGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASSREEESCVLT*QKTEGQGSHMK Trigger: CTTCATGTGGCTCCCTTGCCCTTCTGTCTTCTGCCATGTGAGGACACACGATTCCTCTTCTCTGGAGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666961.1 |
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| CDS GCA 72 bp | GGGCCGCTCCGTAATTCCAAAATGATGCCTTGTTGCTaGATCCTCCAGAGAAGAGGAATCGTGTGTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GPLRNSKMMPCC*ILQRRGIVCPH Trigger: GTGAGGACACACGATTCCTCTTCTCTGGAGGATGCAGCAACAAGGCATCATTTTGGAATTACGGAGCGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666961.1 |
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| CDS CCA 72 bp | ACTGCCAGCACACCACCAGAAACTGGGGGAGAGGCATaGAACGGATTCTTCTTCACAGCTCTCAGAAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TASTPPETGGEA*NGFFFTALRKN Trigger: GTTCTTTCTGAGAGCTGTGAAGAAGAATCCGTTCCATGCCTCTCCCCCAGTTTCTGGTGGTGTGCTGGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 72 bp | AGTAGTCGGAGTCCTGGCTTTGAAGACAAGCAGTCCTaGGTGCCAGAGTCAGCAGCGCTCCTGTTTATTAAC | + |
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Preference number: 6 (lower is better) Translates to: SSRSPGFEDKQS*VPESAALLFIN Trigger: GTTAATAAACAGGAGCGCTGCTGACTCTGGCACCCAGGACTGCTTGTCTTCAAAGCCAGGACTCCGACTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661257.1 |
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| CDS CCA 72 bp | CTAGCCACTGGAACTGGCTTTGAAGACAAGCAGTCCTaGGTGCCAGAGTCAGCAGCGCTCCTGTTTATTAAC | + |
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Preference number: 6 (lower is better) Translates to: LATGTGFEDKQS*VPESAALLFIN Trigger: GTTAATAAACAGGAGCGCTGCTGACTCTGGCACCCAGGACTGCTTGTCTTCAAAGCCAGTTCCAGTGGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668365.1 |
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| CDS CAA 72 bp | GACAGACCAACCAGCATCCCCCTCCCACTTGCCACTTaGATAGGGGTGACTGGTATCTCCATCTCCTTATCT | + |
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Preference number: 6 (lower is better) Translates to: DRPTSIPLPLAT*IGVTGISISLS Trigger: AGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAGTGGGAGGGGGATGCTGGTTGGTCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 90 bp | GTCAGCTCCGACAGACCAACCAGCATCCCCCTCCCACTTGCCACTTaGATAGGGGTGACTGGTATCTCCATCTCCTTATCTTTGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: VSSDRPTSIPLPLAT*IGVTGISISLSLLI Trigger: GATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAGTGGGAGGGGGATGCTGGTTGGTCTGTCGGAGCTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 72 bp | GTCCAAGATCAAGGTTTCAGCCAATTTGGTTTGTGGTaGGGGTTCTCTTCCCAGCTGGTAGATGGGCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: VQDQGFSQFGLW*GFSSQLVDGPL Trigger: AAGCGGCCCATCTACCAGCTGGGAAGAGAACCCTCACCACAAACCAAATTGGCTGAAACCTTGATCTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567574.1 |
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| CDS TCA 72 bp | TTGTTCGCTTGTAACCGCTCTCACCAGGCAAAGTTCTaGGCAAGTGAGATGGACTCATCTCGGAACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LFACNRSHQAKF*ASEMDSSRNSR Trigger: CCTGGAGTTCCGAGATGAGTCCATCTCACTTGCTCAGAACTTTGCCTGGTGAGAGCGGTTACAAGCGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS GCA 72 bp | GTCGGAGTCCTGGCTTTGAAGACAAGCAGTCCTGGGTaGCAGAGTCAGCAGCGCTCCTGTTTATTAACTATT | + |
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Preference number: 6 (lower is better) Translates to: VGVLALKTSSPG*QSQQRSCLLTI Trigger: AATAGTTAATAAACAGGAGCGCTGCTGACTCTGGCACCCAGGACTGCTTGTCTTCAAAGCCAGGACTCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661257.1 |
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| CDS TCA 72 bp | CGCTATTCCACACACAGCCTTCCAAGAATTGCTTTGTaGTACACAGGTATCACAGAGAGGTCCTGTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RYSTHSLPRIAL*YTGITERSCAG Trigger: GCCAGCACAGGACCTCTCTGTGATACCTGTGTATCACAAAGCAATTCTTGGAAGGCTGTGTGTGGAATAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654644.1 |
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| CDS GCA 72 bp | CGAGACCCGCTATTCCACACACAGCCTTCCAAGAATTaGTTTGTGATACACAGGTATCACAGAGAGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RDPLFHTQPSKN*FVIHRYHREVL Trigger: CAGGACCTCTCTGTGATACCTGTGTATCACAAAGCAATTCTTGGAAGGCTGTGTGTGGAATAGCGGGTCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654644.1 |
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| CDS GCA 72 bp | CCACTGGAACTGGCTTTGAAGACAAGCAGTCCTGGGTaGCAGAGTCAGCAGCGCTCCTGTTTATTAACTATT | + |
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Preference number: 6 (lower is better) Translates to: PLELALKTSSPG*QSQQRSCLLTI Trigger: AATAGTTAATAAACAGGAGCGCTGCTGACTCTGGCACCCAGGACTGCTTGTCTTCAAAGCCAGTTCCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668365.1 |
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| CDS CCA 72 bp | ACCGCTCTCACCAGGCAAAGTTCTGAGCAAGTGAGATaGACTCATCTCGGAACTCCAGGCTGTGTTTACATA | + |
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Preference number: 6 (lower is better) Translates to: TALTRQSSEQVR*THLGTPGCVYI Trigger: TATGTAAACACAGCCTGGAGTTCCGAGATGAGTCCATCTCACTTGCTCAGAACTTTGCCTGGTGAGAGCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 72 bp | CCGAGACCCGCTATTCCACACACAGCCTTCCAAGAATaGCTTTGTGATACACAGGTATCACAGAGAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PRPAIPHTAFQE*LCDTQVSQRGP Trigger: AGGACCTCTCTGTGATACCTGTGTATCACAAAGCAATTCTTGGAAGGCTGTGTGTGGAATAGCGGGTCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654644.1 |
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| CDS TCA 72 bp | TCACAGCTCTCAGAAAGAACCATGCTGCTGACACCTTaGTCTTGGAATTCTAGCCACTGGAACTGCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SQLSERTMLLTP*SWNSSHWNCQF Trigger: AAACTGGCAGTTCCAGTGGCTAGAATTCCAAGATCAAGGTGTCAGCAGCATGGTTCTTTCTGAGAGCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666961.1 |
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| CDS CCA 72 bp | CATCCCCCTCCCACTTGCCACTTTGATAGGGGTGACTaGTATCTCCATCTCCTTATCTTTGTTGATCATGTT | + |
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Preference number: 6 (lower is better) Translates to: HPPPTCHFDRGD*YLHLLIFVDHV Trigger: AACATGATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAGTGGGAGGGGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 72 bp | TTAGTCAGAAATGGGGCACAGGTCTCAAGCAGGTCTTaGGACCTTGGGCTATTAATCTTTCTGGGCCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LVRNGAQVSSRS*DLGLLIFLGLN Trigger: ATTAAGGCCCAGAAAGATTAATAGCCCAAGGTCCCAAGACCTGCTTGAGACCTGTGCCCCATTTCTGACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 72 bp | TCACAGCTCTCAGAAAGAACCATGCTGCTGACACCTTaGTCTTGGAATTCTAGCCACTGGAAAATTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SQLSERTMLLTP*SWNSSHWKILE Trigger: CTCCAGAATTTTCCAGTGGCTAGAATTCCAAGATCAAGGTGTCAGCAGCATGGTTCTTTCTGAGAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567574.1 |
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| CDS TCA 72 bp | GATCTTCAGGGAGGGGCTCAGAATCTGTATGCTGAATaGGTGTTCCAAGTGGTTCTTTTGACCTTATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: DLQGGAQNLYAE*VFQVVLLTLWE Trigger: TTCCCATAAGGTCAAAAGAACCACTTGGAACACTCATTCAGCATACAGATTCTGAGCCCCTCCCTGAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS TCA 72 bp | ATTCTTCTTCACAGCTCTCAGAAAGAACCATGCTGCTaGCACCTTGATCTTGGAATTCTAGCCACTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: ILLHSSQKEPCC*HLDLGILATGT Trigger: AGTTCCAGTGGCTAGAATTCCAAGATCAAGGTGTCAGCAGCATGGTTCTTTCTGAGAGCTGTGAAGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 72 bp | ATTCTTCTTCACAGCTCTCAGAAAGAACCATGCTGCTaGCACCTTGATCTTGGAATTCTAGCCACTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ILLHSSQKEPCC*HLDLGILATGK Trigger: TTTTCCAGTGGCTAGAATTCCAAGATCAAGGTGTCAGCAGCATGGTTCTTTCTGAGAGCTGTGAAGAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567574.1 |
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| CDS TCA 72 bp | TCAGTTGATGTTTTTAGTTGCATCGGAAACCAACTCTaGGATGACCAGGGAGCTGGTATTTTTAGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SVDVFSCIGNQL*DDQGAGIFSFQ Trigger: CTGGAAGCTAAAAATACCAGCTCCCTGGTCATCTCAGAGTTGGTTTCCGATGCAACTAAAAACATCAACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 72 bp | ATAATATATGCCAGTGGAGGGCTCCTGTTAAATCTATaGGTTCCAGGACTTTACACCAAGCCTAGTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: IIYASGGLLLNL*VPGLYTKPSES Trigger: TGATTCACTAGGCTTGGTGTAAAGTCCTGGAACCCATAGATTTAACAGGAGCCCTCCACTGGCATATATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS CCA 72 bp | ACTACTTCCCAAACTATTTCCCATAATATATGCCAGTaGAGGGCTCCTGTTAAATCTATGGGTTCCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: TTSQTISHNICQ*RAPVKSMGSRT Trigger: AGTCCTGGAACCCATAGATTTAACAGGAGCCCTCCACTGGCATATATTATGGGAAATAGTTTGGGAAGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS CAA 90 bp | GCCACTTTGATAGGGGTGACTGGTATCTCCATCTCCTTATCTTTGTaGATCATGTTTCTGGGTTTCCAATTGCGTCAATTTAACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ATLIGVTGISISLSL*IMFLGFQLRQFNWL Trigger: CAACCAGTTAAATTGACGCAATTGGAAACCCAGAAACATGATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 90 bp | CTTGCCACTTTGATAGGGGTGACTGGTATCTCCATCTCCTTATCTTaGTTGATCATGTTTCTGGGTTTCCAATTGCGTCAATTTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LATLIGVTGISISLS*LIMFLGFQLRQFNW Trigger: CCAGTTAAATTGACGCAATTGGAAACCCAGAAACATGATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAAAGTGGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 72 bp | TGCCAGAGTCAGCAGCGCTCCTGTTTATTAACTATTTaGCTTAGGTATACCATATCTTATACTCTGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CQSQQRSCLLTI*LRYTISYTLSW Trigger: CCAGCTCAGAGTATAAGATATGGTATACCTAAGTCAAATAGTTAATAAACAGGAGCGCTGCTGACTCTGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS TCA 72 bp | GAGTGGACTCATTCAAACCATAGTCATCTGAGAGAATaGAGTCATCATGGAAAAAGGAGAAGCGACAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: EWTHSNHSHLRE*SHHGKRRSDKR Trigger: CCTTTTGTCGCTTCTCCTTTTTCCATGATGACTTCATTCTCTCAGATGACTATGGTTTGAATGAGTCCACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666961.1 |
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| CDS GCA 72 bp | CCTATTGAGACTTTGCCCATAAGGGAGCGTCTTTGGTaGTTAAAATTCCATCTTTTGGACCTCATATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PIETLPIRERLW*LKFHLLDLISV Trigger: AACTGATATGAGGTCCAAAAGATGGAATTTTAAGCACCAAAGACGCTCCCTTATGGGCAAAGTCTCAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 72 bp | TGTCCTATTGAGACTTTGCCCATAAGGGAGCGTCTTTaGTGCTTAAAATTCCATCTTTTGGACCTCATATCA | + |
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Preference number: 6 (lower is better) Translates to: CPIETLPIRERL*CLKFHLLDLIS Trigger: TGATATGAGGTCCAAAAGATGGAATTTTAAGCACCAAAGACGCTCCCTTATGGGCAAAGTCTCAATAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 72 bp | TTGATAGGGGTGACTGGTATCTCCATCTCCTTATCTTaGTTGATCATGTTTCTGGGTTTCCAATTGCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LIGVTGISISLS*LIMFLGFQLRQ Trigger: TTGACGCAATTGGAAACCCAGAAACATGATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 90 bp | ACTTTGCCCATAAGGGAGCGTCTTTGGTGCTTAAAATTCCATCTTTaGGACCTCATATCAGTTGATGTTTTTAGTTGCATCGGAAACCAA | + |
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Preference number: 6 (lower is better) Translates to: TLPIRERLWCLKFHL*DLISVDVFSCIGNQ Trigger: TTGGTTTCCGATGCAACTAAAAACATCAACTGATATGAGGTCCAAAAGATGGAATTTTAAGCACCAAAGACGCTCCCTTATGGGCAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 90 bp | TTGTTGATCATGTTTCTGGGTTTCCAATTGCGTCAATTTAACTGGTaGCCAATAATTCTGTCATCTGAGGGGAAAGCAGAATCTCAACTG | + |
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Preference number: 6 (lower is better) Translates to: LLIMFLGFQLRQFNW*PIILSSEGKAESQL Trigger: CAGTTGAGATTCTGCTTTCCCCTCAGATGACAGAATTATTGGCAACCAGTTAAATTGACGCAATTGGAAACCCAGAAACATGATCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 90 bp | ATCTCCATCTCCTTATCTTTGTTGATCATGTTTCTGGGTTTCCAATaGCGTCAATTTAACTGGTTGCCAATAATTCTGTCATCTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: ISISLSLLIMFLGFQ*RQFNWLPIILSSEG Trigger: CCCCTCAGATGACAGAATTATTGGCAACCAGTTAAATTGACGCAATTGGAAACCCAGAAACATGATCAACAAAGATAAGGAGATGGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CCA 72 bp | ATCATGTTTCTGGGTTTCCAATTGCGTCAATTTAACTaGTTGCCAATAATTCTGTCATCTGAGGGGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IMFLGFQLRQFN*LPIILSSEGKA Trigger: TGCTTTCCCCTCAGATGACAGAATTATTGGCAACCAGTTAAATTGACGCAATTGGAAACCCAGAAACATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 72 bp | ATGTTTCTGGGTTTCCAATTGCGTCAATTTAACTGGTaGCCAATAATTCTGTCATCTGAGGGGAAAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: MFLGFQLRQFNW*PIILSSEGKAE Trigger: TTCTGCTTTCCCCTCAGATGACAGAATTATTGGCAACCAGTTAAATTGACGCAATTGGAAACCCAGAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS CAA 72 bp | ATAGGGGTGACTGGTATCTCCATCTCCTTATCTTTGTaGATCATGTTTCTGGGTTTCCAATTGCGTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: IGVTGISISLSL*IMFLGFQLRQF Trigger: AAATTGACGCAATTGGAAACCCAGAAACATGATCAACAAAGATAAGGAGATGGAGATACCAGTCACCCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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| CDS TCA 72 bp | ATCTGTATGCTGAATGAGTGTTCCAAGTGGTTCTTTTaGCCTTATGGGAAATGCTCAGTAAATAGTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ICMLNECSKWFF*PYGKCSVNSSF Trigger: AAAGCTACTATTTACTGAGCATTTCCCATAAGGTCAAAAGAACCACTTGGAACACTCATTCAGCATACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661257.1 ENST00000668365.1 |
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| CDS CAA 72 bp | ATAAGGGAGCGTCTTTGGTGCTTAAAATTCCATCTTTaGGACCTCATATCAGTTGATGTTTTTAGTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: IRERLWCLKFHL*DLISVDVFSCI Trigger: GATGCAACTAAAAACATCAACTGATATGAGGTCCAAAAGATGGAATTTTAAGCACCAAAGACGCTCCCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000567574.1 ENST00000654644.1 ENST00000660253.1 ENST00000661257.1 ENST00000666961.1 ENST00000668365.1 |
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