Pregenerated sensors for LINC01941 (Homo sapiens)

Ensembl gene IDs: ENSG00000226813

Ensembl transcript IDs: ENST00000455174.2, ENST00000659902.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGTCAAGGCCCAGAAGCAATTTGGGAATTACTCTTAAATTCCTGGTaGGACTTGAGAGGAGAGGCTCATGCGACTTGCCCAGAGAAGGAG	+
Preference number: 5 (lower is better) Translates to: SQGPEAIWELLLNSW*DLRGEAHATCPEKE Trigger: CTCCTTCTCTGGGCAAGTCGCATGAGCCTCTCCTCTCAAGTCTCACCAGGAATTTAAGAGTAATTCCCAAATTGCTTCTGGGCCTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455174.2 ENST00000659902.1
CDS GCA 72 bp	CTTAAATTCCTGGTGAGACTTGAGAGGAGAGGCTCATaGGACTTGCCCAGAGAAGGAGCTGTCAGAGGTATG	+
Preference number: 6 (lower is better) Translates to: LKFLVRLERRGS*DLPREGAVRGM Trigger: CATACCTCTGACAGCTCCTTCTCTGGGCAAGTCGCATGAGCCTCTCCTCTCAAGTCTCACCAGGAATTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455174.2 ENST00000659902.1
CDS TCA 72 bp	CCAGAGAAGGAGCTGTCAGAGGTATGTTTTAAAGGGTaGGCAGGATTTTGTTGGGAGGACAGTTCAGGCAGA	+
Preference number: 6 (lower is better) Translates to: PEKELSEVCFKG*AGFCWEDSSGR Trigger: TCTGCCTGAACTGTCCTCCCAACAAAATCCTGCTCACCCTTTAAAACATACCTCTGACAGCTCCTTCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659902.1
CDS TCA 72 bp	CCAGAAGCAATTTGGGAATTACTCTTAAATTCCTGGTaGGACTTGAGAGGAGAGGCTCATGCGACTTGCCCA	+
Preference number: 6 (lower is better) Translates to: PEAIWELLLNSW*DLRGEAHATCP Trigger: TGGGCAAGTCGCATGAGCCTCTCCTCTCAAGTCTCACCAGGAATTTAAGAGTAATTCCCAAATTGCTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455174.2 ENST00000659902.1
CDS TCA 72 bp	TTAGTGCATTGTATTAGGAAACACATGATATTGGCTTaGCTGATTTTGGCAGTGTCTGTCAGACTTCTTTGC	+
Preference number: 6 (lower is better) Translates to: LVHCIRKHMILA*LILAVSVRLLC Trigger: GCAAAGAAGTCTGACAGACACTGCCAAAATCAGTCAAGCCAATATCATGTGTTTCCTAATACAATGCACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659902.1
CDS TCA 72 bp	ATTATAAACATCTTGTGGGAAGAGGCTTTGAGACCATaGAATATCCTGTTAGTGGTTAAACTTCCACCCATT	+
Preference number: 6 (lower is better) Translates to: IINILWEEALRP*NILLVVKLPPI Trigger: AATGGGTGGAAGTTTAACCACTAACAGGATATTTCATGGTCTCAAAGCCTCTTCCCACAAGATGTTTATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455174.2 ENST00000659902.1
CDS GCA 72 bp	AATAAAACTATCATTAGGTGTTTTTGGCAAGGATGCTaGAGAAGTGATATTGTGCCTCTCTTAGTGCATTGT	+
Preference number: 6 (lower is better) Translates to: NKTIIRCFWQGC*RSDIVPLLVHC Trigger: ACAATGCACTAAGAGAGGCACAATATCACTTCTGCAGCATCCTTGCCAAAAACACCTAATGATAGTTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659902.1
CDS GCA 72 bp	CATAATAAAACTATCATTAGGTGTTTTTGGCAAGGATaGTGCAGAAGTGATATTGTGCCTCTCTTAGTGCAT	+
Preference number: 6 (lower is better) Translates to: HNKTIIRCFWQG*CRSDIVPLLVH Trigger: ATGCACTAAGAGAGGCACAATATCACTTCTGCAGCATCCTTGCCAAAAACACCTAATGATAGTTTTATTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659902.1

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