Pregenerated sensors for LINC01905 (Homo sapiens)
Ensembl gene IDs: ENSG00000267057Ensembl transcript IDs: ENST00000585684.5, ENST00000588139.2, ENST00000589450.5, ENST00000589983.2, ENST00000592045.5, ENST00000593180.1, ENST00000652801.1, ENST00000652886.1, ENST00000654274.1, ENST00000654844.1, ENST00000654881.1, ENST00000655080.1, ENST00000655602.1, ENST00000656745.1, ENST00000657263.1, ENST00000657626.1, ENST00000658765.1, ENST00000659011.1, ENST00000659119.1, ENST00000660045.1, ENST00000660206.1, ENST00000660935.1, ENST00000661664.1, ENST00000662429.1, ENST00000662462.1, ENST00000662839.1, ENST00000663160.1, ENST00000663271.1, ENST00000663675.1, ENST00000663754.1, ENST00000664682.1, ENST00000665184.1, ENST00000665510.1, ENST00000665718.1, ENST00000666707.1, ENST00000667595.1, ENST00000667821.1, ENST00000668250.1, ENST00000668277.1, ENST00000668293.1, ENST00000669280.1, ENST00000669356.1, ENST00000670007.1, ENST00000670330.1, ENST00000670523.1, ENST00000670965.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCAGGGCTGAAGGCTGTATATTGCTGTCTTCAGCCACCTCACTGTaGACCTCTTGCCCTTGTCTGGGTAGAGCTTCTTCCCAGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CRAEGCILLSSATSL*TSCPCLGRASSQAL Trigger: GAGAGCCTGGGAAGAAGCTCTACCCAGACAAGGGCAAGAGGTGCACAGTGAGGTGGCTGAAGACAGCAATATACAGCCTTCAGCCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS TCA 90 bp | GCCACTGTGGCCATCACCTGGATGCTGCAGTTCCTTGACGGGGTATaGGGAAGCAGGTTCTTTGTACTAGGAGGAGTGGAAGATGCCATT | + |
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Preference number: 5 (lower is better) Translates to: ATVAITWMLQFLDGV*GSRFFVLGGVEDAI Trigger: AATGGCATCTTCCACTCCTCCTAGTACAAAGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGGTGATGGCCACAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000588139.2 ENST00000589983.2 ENST00000654844.1 ENST00000654881.1 ENST00000655080.1 ENST00000656745.1 ENST00000660045.1 ENST00000660935.1 ENST00000661664.1 ENST00000663271.1 ENST00000663675.1 ENST00000665718.1 ENST00000667821.1 ENST00000668250.1 ENST00000668277.1 ENST00000670007.1 ENST00000670330.1 |
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| CDS GCA 90 bp | TTCATCAAAGGTAGACCAGCCTGTGCAGGGCTGAAGGCTGTATATTaGTGTCTTCAGCCACCTCACTGTGCACCTCTTGCCCTTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FIKGRPACAGLKAVY*CLQPPHCAPLALVW Trigger: CCAGACAAGGGCAAGAGGTGCACAGTGAGGTGGCTGAAGACAGCAATATACAGCCTTCAGCCCTGCACAGGCTGGTCTACCTTTGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS TCA 90 bp | TGCAGACCTTTGAGGCAGAGAAAGTACCTGGATGCTGCAGTTCCTTaGCGGGGTATGAGGAAGCAGGTTCTTTGTACTAGGAGGAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: CRPLRQRKYLDAAVP*RGMRKQVLCTRRSG Trigger: TCCACTCCTCCTAGTACAAAGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGGTACTTTCTCTGCCTCAAAGGTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652801.1 ENST00000654274.1 ENST00000657263.1 ENST00000657626.1 ENST00000659119.1 ENST00000662429.1 ENST00000664682.1 ENST00000665184.1 ENST00000670523.1 ENST00000670965.1 |
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| CDS CCA 90 bp | CAGGATTGCTTTTCCCATATTTCCCATAGAGTTTCCATTCTTCCCTaGAGCTCCTGCAGTGCCTACCAGCACATTGCCTGTGACAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: QDCFSHISHRVSILP*SSCSAYQHIACDSA Trigger: GGCACTGTCACAGGCAATGTGCTGGTAGGCACTGCAGGAGCTCCAGGGAAGAATGGAAACTCTATGGGAAATATGGGAAAAGCAATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658765.1 ENST00000665184.1 |
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| CDS TCA 90 bp | ATGAAGCTGGGTCTGGTGTCTGTGCCTGAATATTCCTACAGCTTCTaGGTCCTTGAAGGCAGCAATGAGTTTCCCAATGGGCGTGACCAT | + |
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Preference number: 5 (lower is better) Translates to: MKLGLVSVPEYSYSF*VLEGSNEFPNGRDH Trigger: ATGGTCACGCCCATTGGGAAACTCATTGCTGCCTTCAAGGACTCAGAAGCTGTAGGAATATTCAGGCACAGACACCAGACCCAGCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000654844.1 ENST00000655602.1 ENST00000659119.1 ENST00000660206.1 ENST00000661664.1 ENST00000662462.1 ENST00000662839.1 ENST00000663675.1 ENST00000663754.1 ENST00000665510.1 ENST00000667595.1 ENST00000669280.1 ENST00000670330.1 ENST00000670523.1 |
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| CDS TCA 90 bp | AAGGGTGCTGTTGATGGTGCTTTCCTGTGCCTGAGATTAGAGATCTaGAAGACCAAGCTGATCCAGGCCTCCTTCCATGCAGATTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: KGAVDGAFLCLRLEI*KTKLIQASFHADCV Trigger: CACACAATCTGCATGGAAGGAGGCCTGGATCAGCTTGGTCTTTCAGATCTCTAATCTCAGGCACAGGAAAGCACCATCAACAGCACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000660045.1 ENST00000660935.1 ENST00000661664.1 ENST00000663271.1 |
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| CDS TCA 90 bp | GACCTGAAACAATGGGACTGGATGCTGCAGTTCCTTGACGGGGTATaGGGAAGCAGGTTCTTTGTACTAGGAGGAGTGGAAGATGCCATT | + |
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Preference number: 5 (lower is better) Translates to: DLKQWDWMLQFLDGV*GSRFFVLGGVEDAI Trigger: AATGGCATCTTCCACTCCTCCTAGTACAAAGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGTCCCATTGTTTCAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663160.1 ENST00000663754.1 |
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| CDS TCA 90 bp | AGGAAAAACAAACCTTCATCAAAGGTAGACCAGCCTGTGCAGGGCTaGAGGCTGTATATTGCTGTCTTCAGCCACCTCACTGTGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: RKNKPSSKVDQPVQG*RLYIAVFSHLTVHL Trigger: GAGGTGCACAGTGAGGTGGCTGAAGACAGCAATATACAGCCTTCAGCCCTGCACAGGCTGGTCTACCTTTGATGAAGGTTTGTTTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS GCA 90 bp | ATGGAGAATGGGATGCAGACCTTTGAGGCAGAGAAAGTACCTGGATaGTGCAGTTCCTTGACGGGGTATGAGGAAGCAGGTTCTTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: MENGMQTFEAEKVPG*CSSLTGYEEAGSLY Trigger: GTACAAAGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGGTACTTTCTCTGCCTCAAAGGTCTGCATCCCATTCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652801.1 ENST00000654274.1 ENST00000657263.1 ENST00000657626.1 ENST00000659119.1 ENST00000662429.1 ENST00000664682.1 ENST00000665184.1 ENST00000670523.1 ENST00000670965.1 |
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| CDS GCA 90 bp | ATGGCCCCCAAACATACAGCTGAAGTGCTGTGTAGTGTTTCTATGTaGAAGAAGGCTGGGATGTACCTGCTCCCAGATGTCCACAATGAG | + |
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Preference number: 5 (lower is better) Translates to: MAPKHTAEVLCSVSM*KKAGMYLLPDVHNE Trigger: CTCATTGTGGACATCTGGGAGCAGGTACATCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTTGGGGGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000657626.1 ENST00000660935.1 ENST00000668293.1 |
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| CDS GCA 90 bp | TCTTCCTGGACCAGTGTTCTTTGGGAAATCCTGGGTCTGATGACTTaGCATTGCTGCCATGTGTCTCCATTCTCTGGTTTCTTCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSWTSVLWEILGLMT*HCCHVSPFSGFFLA Trigger: AGCCAAGAAGAAACCAGAGAATGGAGACACATGGCAGCAATGGCAAGTCATCAGACCCAGGATTTCCCAAAGAACACTGGTCCAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 32 transcripts: ENST00000585684.5 ENST00000588139.2 ENST00000589450.5 ENST00000589983.2 ENST00000592045.5 ENST00000593180.1 ENST00000654844.1 ENST00000654881.1 ENST00000655080.1 ENST00000655602.1 ENST00000656745.1 ENST00000658765.1 ENST00000659011.1 ENST00000660045.1 ENST00000660206.1 ENST00000660935.1 ENST00000661664.1 ENST00000662839.1 ENST00000663160.1 ENST00000663271.1 ENST00000663675.1 ENST00000663754.1 ENST00000665510.1 ENST00000665718.1 ENST00000667821.1 ENST00000668250.1 ENST00000668277.1 ENST00000668293.1 ENST00000669280.1 ENST00000669356.1 ENST00000670007.1 ENST00000670330.1 |
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| CDS TCA 90 bp | CTATTGACAGAACCTAACTTTTTGACCTGTATTGCGAGATGTCAATaGGCTATGACATGTCTCAGAGTGCTCCACGGGGAAGGCCGATCC | + |
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Preference number: 5 (lower is better) Translates to: LLTEPNFLTCIARCQ*AMTCLRVLHGEGRS Trigger: GGATCGGCCTTCCCCGTGGAGCACTCTGAGACATGTCATAGCTCATTGACATCTCGCAATACAGGTCAAAAAGTTAGGTTCTGTCAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652801.1 |
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| CDS GCA 90 bp | ATGGCCCCCAAACATACAGCTGAAGTGCTGTGTAGTGTTTCTATGTaGAAGAAGGCTGGGATGTACCTGGTTGGTTTCTGCCATTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: MAPKHTAEVLCSVSM*KKAGMYLVGFCHLS Trigger: ACTCAAATGGCAGAAACCAACCAGGTACATCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTTGGGGGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589450.5 |
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| CDS GCA 90 bp | ATGGCCCCCAAACATACAGCTGAAGTGCTGTGTAGTGTTTCTATGTaGAAGAAGGCTGGGATGTACACAAAGGAGACCAGGAAGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: MAPKHTAEVLCSVSM*KKAGMYTKETRKKI Trigger: GATCTTCTTCCTGGTCTCCTTTGTGTACATCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTTGGGGGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655080.1 ENST00000669280.1 ENST00000670330.1 |
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| CDS GCA 90 bp | AAGGCTGAGCTCAAGTTTGCCTTGCTCCTTGAAGCTGTCCAGGATTaGTTTTCCCATATTTCCCATAGAGTTTCCATTCTTCCCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: KAELKFALLLEAVQD*FSHISHRVSILPWS Trigger: GCTCCAGGGAAGAATGGAAACTCTATGGGAAATATGGGAAAAGCAATCCTGGACAGCTTCAAGGAGCAAGGCAAACTTGAGCTCAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658765.1 ENST00000665184.1 |
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| CDS TCA 90 bp | CCTTTGCCACAAGTTAGAGATGAAGCTGGGTCTGGTGTCTGTGCCTaGATATTCCTACAGCTTCTGAGTCCTCTTAAAACTCTGAGATCC | + |
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Preference number: 5 (lower is better) Translates to: PLPQVRDEAGSGVCA*IFLQLLSPLKTLRS Trigger: GGATCTCAGAGTTTTAAGAGGACTCAGAAGCTGTAGGAATATTCAGGCACAGACACCAGACCCAGCTTCATCTCTAACTTGTGGCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670007.1 |
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| CDS GCA 90 bp | GTTTCTATGTGCAAGAAGGCTGGGATGTACCTTTTTGACCTGTATTaGGAGATGTCAATGAGCTATGACATGTCTCAGAGTGCTCCACGG | + |
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Preference number: 5 (lower is better) Translates to: VSMCKKAGMYLFDLY*EMSMSYDMSQSAPR Trigger: CCGTGGAGCACTCTGAGACATGTCATAGCTCATTGACATCTCGCAATACAGGTCAAAAAGGTACATCCCAGCCTTCTTGCACATAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000652886.1 ENST00000655602.1 ENST00000665184.1 ENST00000667821.1 |
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| CDS TCA 90 bp | TTAGGTATGAATGTATTCTGGATGCTGCAGTTCCTTGACGGGGTATaGGGAAGCAGGTTCTTTGTACTAGGAGGAGTGGAAGATGCCATT | + |
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Preference number: 5 (lower is better) Translates to: LGMNVFWMLQFLDGV*GSRFFVLGGVEDAI Trigger: AATGGCATCTTCCACTCCTCCTAGTACAAAGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGAATACATTCATACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000593180.1 ENST00000655602.1 ENST00000660206.1 ENST00000662839.1 ENST00000665510.1 ENST00000669280.1 ENST00000669356.1 |
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| CDS TCA 90 bp | ATGAAGCTGGGTCTGGTGTCTGTGCCTGAATATTCCTACAGCTTCTaGGTCTATAGTCTCTGCCCCAAAGAAGCTTCTCATCTTCTATGT | + |
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Preference number: 5 (lower is better) Translates to: MKLGLVSVPEYSYSF*VYSLCPKEASHLLC Trigger: ACATAGAAGATGAGAAGCTTCTTTGGGGCAGAGACTATAGACTCAGAAGCTGTAGGAATATTCAGGCACAGACACCAGACCCAGCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000652886.1 ENST00000657626.1 ENST00000662429.1 ENST00000665718.1 ENST00000666707.1 |
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| CDS GCA 90 bp | AAAGAAAAGAACTATGGTGGGTCAGATGAGAGACAAAAATCACTCTaGAGAGATACAGCATGCAGGAGACCACCTCTGAGACTGAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: KEKNYGGSDERQKSL*RDTACRRPPLRLRQ Trigger: TTGCCTCAGTCTCAGAGGTGGTCTCCTGCATGCTGTATCTCTGCAGAGTGATTTTTGTCTCTCATCTGACCCACCATAGTTCTTTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654881.1 ENST00000670007.1 |
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| CDS GCA 90 bp | ATGGCCCCCAAACATACAGCTGAAGTGCTGTGTAGTGTTTCTATGTaGAAGAAGGCTGGGATGTACCATTCACCACAGAACAAAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: MAPKHTAEVLCSVSM*KKAGMYHSPQNKIQ Trigger: TTGAATTTTGTTCTGTGGTGAATGGTACATCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTTGGGGGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657263.1 ENST00000660206.1 ENST00000662462.1 ENST00000665718.1 |
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| CDS GCA 90 bp | GAAGATCAGCATTCCATCATCGATTGTTACCCTTCAAATCCACAGTaGCCCATCTTTACTCAGTTGCCAGGGCTATTCGACTTTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: EDQHSIIDCYPSNPQ*PIFTQLPGLFDFSF Trigger: AAAAGAAAAGTCGAATAGCCCTGGCAACTGAGTAAAGATGGGGCACTGTGGATTTGAAGGGTAACAATCGATGATGGAATGCTGATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000669280.1 ENST00000670330.1 |
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| CDS TCA 90 bp | ATTCAATGCAGGTTCTCTTTCATTCAGGAAGTGTTTTGGGCCTCATaGTTATTTTATGTTCCAGACCCTGTGATAGCTGCTTCACTTGAT | + |
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Preference number: 5 (lower is better) Translates to: IQCRFSFIQEVFWAS*LFYVPDPVIAASLD Trigger: ATCAAGTGAAGCAGCTATCACAGGGTCTGGAACATAAAATAATCATGAGGCCCAAAACACTTCCTGAATGAAAGAGAACCTGCATTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657263.1 ENST00000660206.1 ENST00000665718.1 |
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| CDS TCA 90 bp | TTTGCAATTCCTTCATGCTTTATGTATATATACAAAGGGTGCTGTTaGTGGTGCTTTCCTGTGCCTGAGATTAGAGATCTGAAAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: FAIPSCFMYIYKGCC*WCFPVPEIRDLKDQ Trigger: TTGGTCTTTCAGATCTCTAATCTCAGGCACAGGAAAGCACCATCAACAGCACCCTTTGTATATATACATAAAGCATGAAGGAATTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663271.1 |
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| CDS TCA 72 bp | GCCACTGTGGCCATCACCTGGTTGGTTTCTGCCATTTaGGTAGAGAGAGGCATCAGAGTGACAGGCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ATVAITWLVSAI*VERGIRVTGHH Trigger: GTGATGGCCTGTCACTCTGATGCCTCTCTCTACTCAAATGGCAGAAACCAACCAGGTGATGGCCACAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592045.5 |
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| CDS GCA 72 bp | GGGATGCAGACCTTTGAGGCAGAGAAAGTACCTGGATaGTGCAGTTCCTTGACGGGGTATGAGGAAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GMQTFEAEKVPG*CSSLTGYEEAG Trigger: ACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGGTACTTTCTCTGCCTCAAAGGTCTGCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652801.1 ENST00000654274.1 ENST00000657263.1 ENST00000657626.1 ENST00000659119.1 ENST00000662429.1 ENST00000664682.1 ENST00000665184.1 ENST00000670523.1 ENST00000670965.1 |
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| CDS GCA 72 bp | ATATTGCTGTCTTCAGCCACCTCACTGTGCACCTCTTaGCCTTGTCTGGGTAGAGCTTCTTCCCAGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ILLSSATSLCTS*PCLGRASSQAL Trigger: GAGAGCCTGGGAAGAAGCTCTACCCAGACAAGGGCAAGAGGTGCACAGTGAGGTGGCTGAAGACAGCAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS CAA 72 bp | GGGAGCATAGGGTCCCATCCCAGGATGTACTGTCCTTaGCCACAAGTTAGAGATGAAGCTGGGTCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GSIGSHPRMYCP*PQVRDEAGSGV Trigger: GACACCAGACCCAGCTTCATCTCTAACTTGTGGCAAAGGACAGTACATCCTGGGATGGGACCCTATGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000652886.1 ENST00000654844.1 ENST00000655602.1 ENST00000657626.1 ENST00000659119.1 ENST00000660206.1 ENST00000661664.1 ENST00000662429.1 ENST00000662462.1 ENST00000662839.1 ENST00000663675.1 ENST00000663754.1 ENST00000665510.1 ENST00000665718.1 ENST00000666707.1 ENST00000667595.1 ENST00000669280.1 ENST00000670007.1 ENST00000670330.1 ENST00000670523.1 |
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| CDS TCA 72 bp | GAGCAGCCGCCTGAGTGTTGCTGGAATACCAGCACCTaGTATGTTCCAGACCCTGTGATAGCTGCTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: EQPPECCWNTST*YVPDPVIAASL Trigger: AAGTGAAGCAGCTATCACAGGGTCTGGAACATATCAGGTGCTGGTATTCCAGCAACACTCAGGCGGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670965.1 |
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| CDS GCA 72 bp | ATTTCCCATAGAGTTTCCATTCTTCCCTGGAGCTCCTaGAGTGCCTACCAGCACATTGCCTGTGACAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ISHRVSILPWSS*SAYQHIACDSA Trigger: GGCACTGTCACAGGCAATGTGCTGGTAGGCACTGCAGGAGCTCCAGGGAAGAATGGAAACTCTATGGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658765.1 ENST00000665184.1 |
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| CDS GCA 72 bp | GAAGGCTGTATATTGCTGTCTTCAGCCACCTCACTGTaGACCTCTTGCCCTTGTCTGGGTAGAGCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EGCILLSSATSL*TSCPCLGRASS Trigger: GGAAGAAGCTCTACCCAGACAAGGGCAAGAGGTGCACAGTGAGGTGGCTGAAGACAGCAATATACAGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS CAA 72 bp | TGCCACTGTGGCCATCACCTGGTTGGTTTCTGCCATTaGAGTAGAGAGAGGCATCAGAGTGACAGGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: CHCGHHLVGFCH*SRERHQSDRPS Trigger: TGATGGCCTGTCACTCTGATGCCTCTCTCTACTCAAATGGCAGAAACCAACCAGGTGATGGCCACAGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592045.5 |
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| CDS GCA 72 bp | ATGCAGACCTTTGAGGCAGAGAAAGTACCTGGATGCTaGAGTTCCTTGACGGGGTATGAGGAAGCAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: MQTFEAEKVPGC*SSLTGYEEAGS Trigger: AGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGGTACTTTCTCTGCCTCAAAGGTCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652801.1 ENST00000654274.1 ENST00000657263.1 ENST00000657626.1 ENST00000659119.1 ENST00000662429.1 ENST00000664682.1 ENST00000665184.1 ENST00000670523.1 ENST00000670965.1 |
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| CDS CAA 90 bp | CCAGGGAACACTTTTTCACAGAGCATCTTCCTGGACCAGTGTTCTTaGGGAAATCCTGGGTCTGATGACTTGCCATTGCTGCCATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: PGNTFSQSIFLDQCS*GNPGSDDLPLLPCV Trigger: GACACATGGCAGCAATGGCAAGTCATCAGACCCAGGATTTCCCAAAGAACACTGGTCCAGGAAGATGCTCTGTGAAAAAGTGTTCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 32 transcripts: ENST00000585684.5 ENST00000588139.2 ENST00000589450.5 ENST00000589983.2 ENST00000592045.5 ENST00000593180.1 ENST00000654844.1 ENST00000654881.1 ENST00000655080.1 ENST00000655602.1 ENST00000656745.1 ENST00000658765.1 ENST00000659011.1 ENST00000660045.1 ENST00000660206.1 ENST00000660935.1 ENST00000661664.1 ENST00000662839.1 ENST00000663160.1 ENST00000663271.1 ENST00000663675.1 ENST00000663754.1 ENST00000665510.1 ENST00000665718.1 ENST00000667821.1 ENST00000668250.1 ENST00000668277.1 ENST00000668293.1 ENST00000669280.1 ENST00000669356.1 ENST00000670007.1 ENST00000670330.1 |
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| CDS TCA 72 bp | TTGAGGCAGAGAAAGTACCTGGATGCTGCAGTTCCTTaGCGGGGTATGAGGAAGCAGGTTCTTTGTACTAGG | + |
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Preference number: 6 (lower is better) Translates to: LRQRKYLDAAVP*RGMRKQVLCTR Trigger: CCTAGTACAAAGAACCTGCTTCCTCATACCCCGTCAAGGAACTGCAGCATCCAGGTACTTTCTCTGCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652801.1 ENST00000654274.1 ENST00000657263.1 ENST00000657626.1 ENST00000659119.1 ENST00000662429.1 ENST00000664682.1 ENST00000665184.1 ENST00000670523.1 ENST00000670965.1 |
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| CDS TCA 72 bp | CTTCATGTCTCACCCACTGTCTGTTCACTTCTGACCTaGAACAATGGGACTGGATGCTGCAGTTCCTTGACG | + |
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Preference number: 6 (lower is better) Translates to: LHVSPTVCSLLT*NNGTGCCSSLT Trigger: CGTCAAGGAACTGCAGCATCCAGTCCCATTGTTTCAGGTCAGAAGTGAACAGACAGTGGGTGAGACATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663160.1 ENST00000663754.1 |
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| CDS TCA 72 bp | AAACCTTCATCAAAGGTAGACCAGCCTGTGCAGGGCTaGAGGCTGTATATTGCTGTCTTCAGCCACCTCACT | + |
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Preference number: 6 (lower is better) Translates to: KPSSKVDQPVQG*RLYIAVFSHLT Trigger: AGTGAGGTGGCTGAAGACAGCAATATACAGCCTTCAGCCCTGCACAGGCTGGTCTACCTTTGATGAAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS GCA 72 bp | ATGTGCAAGAAGGCTGGGATGTACCTGGTTGGTTTCTaGCATTTGAGTAGAGAGAGGCATCAGAGTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: MCKKAGMYLVGF*HLSRERHQSDR Trigger: CCTGTCACTCTGATGCCTCTCTCTACTCAAATGGCAGAAACCAACCAGGTACATCCCAGCCTTCTTGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589450.5 |
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| CDS CCA 72 bp | CCATTCTGGAGGATGAGAAGTTCAATATCAAGTTGCTaGCATCTGGCAAGGGCCTTCTTGCTGCATCATCCC | + |
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Preference number: 6 (lower is better) Translates to: PFWRMRSSISSC*HLARAFLLHHP Trigger: GGGATGATGCAGCAAGAAGGCCCTTGCCAGATGCCAGCAACTTGATATTGAACTTCTCATCCTCCAGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585684.5 ENST00000592045.5 |
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| CDS CAA 90 bp | ATCTTCCTGGACCAGTGTTCTTTGGGAAATCCTGGGTCTGATGACTaGCCATTGCTGCCATGTGTCTCCATTCTCTGGTTTCTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: IFLDQCSLGNPGSDD*PLLPCVSILWFLLG Trigger: GCCAAGAAGAAACCAGAGAATGGAGACACATGGCAGCAATGGCAAGTCATCAGACCCAGGATTTCCCAAAGAACACTGGTCCAGGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 32 transcripts: ENST00000585684.5 ENST00000588139.2 ENST00000589450.5 ENST00000589983.2 ENST00000592045.5 ENST00000593180.1 ENST00000654844.1 ENST00000654881.1 ENST00000655080.1 ENST00000655602.1 ENST00000656745.1 ENST00000658765.1 ENST00000659011.1 ENST00000660045.1 ENST00000660206.1 ENST00000660935.1 ENST00000661664.1 ENST00000662839.1 ENST00000663160.1 ENST00000663271.1 ENST00000663675.1 ENST00000663754.1 ENST00000665510.1 ENST00000665718.1 ENST00000667821.1 ENST00000668250.1 ENST00000668277.1 ENST00000668293.1 ENST00000669280.1 ENST00000669356.1 ENST00000670007.1 ENST00000670330.1 |
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| CDS GCA 72 bp | GATGAGAGACAAAAATCACTCTGCAGAGATACAGCATaGAGGAGACCACCTCTGAGACTGAGGCAAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: DERQKSLCRDTA*RRPPLRLRQEC Trigger: ACACTCTTGCCTCAGTCTCAGAGGTGGTCTCCTGCATGCTGTATCTCTGCAGAGTGATTTTTGTCTCTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654881.1 ENST00000670007.1 |
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| CDS CAA 72 bp | TTCTACCCATGCTTGAAGGCTGAGCTCAAGTTTGCCTaGCTCCTTGAAGCTGTCCAGGATTGCTTTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: FYPCLKAELKFA*LLEAVQDCFSH Trigger: ATGGGAAAAGCAATCCTGGACAGCTTCAAGGAGCAAGGCAAACTTGAGCTCAGCCTTCAAGCATGGGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000652801.1 ENST00000656745.1 ENST00000658765.1 ENST00000665184.1 |
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| CDS CAA 90 bp | AGAGAGAGGCATCAGAGTGACAGGCCATCACTCTTTGTGTTCCTCTaGAGGTATGACAGAGAGGAAAAACAAACCATTCTGGAGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: RERHQSDRPSLFVFL*RYDREEKQTILEDE Trigger: CTCATCCTCCAGAATGGTTTGTTTTTCCTCTCTGTCATACCTCAAGAGGAACACAAAGAGTGATGGCCTGTCACTCTGATGCCTCTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592045.5 |
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| CDS CAA 90 bp | TTAATATTCCCTGTGTCCTTCCTTGAGTCCAAATTCTACCCATGCTaGAAGGCTGAGCTCAAGTTTGCCTTGCTCCTTGAAGCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LIFPVSFLESKFYPC*KAELKFALLLEAVQ Trigger: CTGGACAGCTTCAAGGAGCAAGGCAAACTTGAGCTCAGCCTTCAAGCATGGGTAGAATTTGGACTCAAGGAAGGACACAGGGAATATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652801.1 ENST00000656745.1 ENST00000658765.1 ENST00000665184.1 |
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| CDS TCA 72 bp | GGTCTGGTGTCTGTGCCTGAATATTCCTACAGCTTCTaGGTCTATAGTCTCTGCCCCAAAGAAGCTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLVSVPEYSYSF*VYSLCPKEASH Trigger: ATGAGAAGCTTCTTTGGGGCAGAGACTATAGACTCAGAAGCTGTAGGAATATTCAGGCACAGACACCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000652886.1 ENST00000657626.1 ENST00000662429.1 ENST00000665718.1 ENST00000666707.1 |
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| CDS TCA 72 bp | GACAGAACCTTTTTGACCTGTATTGCGAGATGTCAATaGGCTATGACATGTCTCAGAGTGCTCCACGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DRTFLTCIARCQ*AMTCLRVLHGE Trigger: TTCCCCGTGGAGCACTCTGAGACATGTCATAGCTCATTGACATCTCGCAATACAGGTCAAAAAGGTTCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656745.1 |
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| CDS TCA 72 bp | CTATTGACAGAACCTAACTGGTTGGTTTCTGCCATTTaGGTAGAGAGAGGCATCAGAGTGACAGGCCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLTEPNWLVSAI*VERGIRVTGHH Trigger: GTGATGGCCTGTCACTCTGATGCCTCTCTCTACTCAAATGGCAGAAACCAACCAGTTAGGTTCTGTCAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS GCA 72 bp | AACTATGGTGGGTCAGATGAGAGACAAAAATCACTCTaGAGAGATACAGCATGCAGGAGACCACCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NYGGSDERQKSL*RDTACRRPPLR Trigger: TCTCAGAGGTGGTCTCCTGCATGCTGTATCTCTGCAGAGTGATTTTTGTCTCTCATCTGACCCACCATAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654881.1 ENST00000670007.1 |
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| CDS GCA 72 bp | CATTCCATCATCGATTGTTACCCTTCAAATCCACAGTaGCCCATCTTTACTCAGTTGCCAGGGCTATTCGAC | + |
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Preference number: 6 (lower is better) Translates to: HSIIDCYPSNPQ*PIFTQLPGLFD Trigger: GTCGAATAGCCCTGGCAACTGAGTAAAGATGGGGCACTGTGGATTTGAAGGGTAACAATCGATGATGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669280.1 ENST00000670330.1 |
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| CDS CAA 72 bp | TCAATATCAAGTTGCTGGCATCTGGCAAGGGCCTTCTaGCTGCATCATCCCATGAAAGAAGGGCAAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SISSCWHLARAF*LHHPMKEGQKE Trigger: CTCTTTTTGCCCTTCTTTCATGGGATGATGCAGCAAGAAGGCCCTTGCCAGATGCCAGCAACTTGATATTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000585684.5 ENST00000592045.5 |
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| CDS CAA 72 bp | ATCACCATTCTGGAGGATGAGAAGTTCAATATCAAGTaGCTGGCATCTGGCAAGGGCCTTCTTGCTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: ITILEDEKFNIK*LASGKGLLAAS Trigger: TGATGCAGCAAGAAGGCCCTTGCCAGATGCCAGCAACTTGATATTGAACTTCTCATCCTCCAGAATGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585684.5 |
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| CDS CAA 72 bp | CAAACCATTCTGGAGGATGAGAAGTTCAATATCAAGTaGCTGGCATCTGGCAAGGGCCTTCTTGCTGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: QTILEDEKFNIK*LASGKGLLAAS Trigger: TGATGCAGCAAGAAGGCCCTTGCCAGATGCCAGCAACTTGATATTGAACTTCTCATCCTCCAGAATGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592045.5 |
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| CDS CAA 90 bp | TGTACACAAAGGAGACCAGGAAGAAGATCAGCATTCCATCATCGATaGTTACCCTTCAAATCCACAGTGCCCCATCTTTACTCAGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CTQRRPGRRSAFHHR*LPFKSTVPHLYSVA Trigger: GGCAACTGAGTAAAGATGGGGCACTGTGGATTTGAAGGGTAACAATCGATGATGGAATGCTGATCTTCTTCCTGGTCTCCTTTGTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000669280.1 ENST00000670330.1 |
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| CDS TCA 72 bp | GAACCTAACTTTTTGACCTGTATTGCGAGATGTCAATaGGCTATGACATGTCTCAGAGTGCTCCACGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EPNFLTCIARCQ*AMTCLRVLHGE Trigger: TTCCCCGTGGAGCACTCTGAGACATGTCATAGCTCATTGACATCTCGCAATACAGGTCAAAAAGTTAGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652801.1 |
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| CDS GCA 72 bp | AAACATACAGCTGAAGTGCTGTGTAGTGTTTCTATGTaGAAGAAGGCTGGGATGTACCTGGTTGGTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KHTAEVLCSVSM*KKAGMYLVGFC Trigger: GCAGAAACCAACCAGGTACATCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589450.5 |
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| CDS GCA 72 bp | TGCTGTTTAAAATGGCCCCCAAACATACAGCTGAAGTaGTGTGTAGTGTTTCTATGTGCAAGAAGGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: CCLKWPPNIQLK*CVVFLCARRLG Trigger: TCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTTGGGGGCCATTTTAAACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 34 transcripts: ENST00000589450.5 ENST00000652886.1 ENST00000654274.1 ENST00000654844.1 ENST00000655080.1 ENST00000655602.1 ENST00000657263.1 ENST00000657626.1 ENST00000659011.1 ENST00000659119.1 ENST00000660045.1 ENST00000660206.1 ENST00000660935.1 ENST00000661664.1 ENST00000662429.1 ENST00000662462.1 ENST00000662839.1 ENST00000663160.1 ENST00000663271.1 ENST00000663675.1 ENST00000663754.1 ENST00000664682.1 ENST00000665184.1 ENST00000665510.1 ENST00000665718.1 ENST00000666707.1 ENST00000667595.1 ENST00000667821.1 ENST00000668250.1 ENST00000668293.1 ENST00000669280.1 ENST00000669356.1 ENST00000670330.1 ENST00000670523.1 |
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| CDS CCA 72 bp | GAAGAAGGCTTTCATCGAGTGCTGCAGCCAAGGAAATaGAAGATCAGTTTCAAATCCATCTCCCTGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: EEGFHRVLQPRK*KISFKSISLNN Trigger: GTTGTTCAGGGAGATGGATTTGAAACTGATCTTCCATTTCCTTGGCTGCAGCACTCGATGAAAGCCTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654881.1 ENST00000670007.1 |
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| CDS CAA 72 bp | AGGAGACCAGGAAGAAGATCAGCATTCCATCATCGATaGTTACCCTTCAAATCCACAGTGCCCCATCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: RRPGRRSAFHHR*LPFKSTVPHLY Trigger: GTAAAGATGGGGCACTGTGGATTTGAAGGGTAACAATCGATGATGGAATGCTGATCTTCTTCCTGGTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000669280.1 ENST00000670330.1 |
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| CDS CAA 90 bp | AGAGAGAGGCATCAGAGTGACAGGCCATCACTCTTTGTGTTCCTCTaGAGGTATGACAGAGAGGAAAAACAAACCTTCATCAAAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RERHQSDRPSLFVFL*RYDREEKQTFIKGR Trigger: TCTACCTTTGATGAAGGTTTGTTTTTCCTCTCTGTCATACCTCAAGAGGAACACAAAGAGTGATGGCCTGTCACTCTGATGCCTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS TCA 72 bp | CAAGTTAGAGATGAAGCTGGGTCTGGTGTCTGTGCCTaGATATTCCTACAGCTTCTGAGTCCTCTTAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: QVRDEAGSGVCA*IFLQLLSPLKT Trigger: AGTTTTAAGAGGACTCAGAAGCTGTAGGAATATTCAGGCACAGACACCAGACCCAGCTTCATCTCTAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670007.1 |
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| CDS CAA 72 bp | CATCAGAGTGACAGGCCATCACTCTTTGTGTTCCTCTaGAGGTATGACAGAGAGGAAAAACAAACCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: HQSDRPSLFVFL*RYDREEKQTFI Trigger: GATGAAGGTTTGTTTTTCCTCTCTGTCATACCTCAAGAGGAACACAAAGAGTGATGGCCTGTCACTCTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668277.1 |
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| CDS TCA 72 bp | CCTTCATGCTTTATGTATATATACAAAGGGTGCTGTTaGTGGTGCTTTCCTGTGCCTGAGATTAGAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSCFMYIYKGCC*WCFPVPEIRDL Trigger: CAGATCTCTAATCTCAGGCACAGGAAAGCACCATCAACAGCACCCTTTGTATATATACATAAAGCATGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663271.1 |
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| CDS CAA 90 bp | TCTCTCAGCTCTGTATCCTCCTCTCTGGTCAGGTTAATGTCTTCATaGGTAGTCATAAAGAGCTTCTTTGCTTTTAATATTCCCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSSVSSSLVRLMSS*VVIKSFFAFNIPCV Trigger: GACACAGGGAATATTAAAAGCAAAGAAGCTCTTTATGACTACCAATGAAGACATTAACCTGACCAGAGAGGAGGATACAGAGCTGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000652801.1 ENST00000656745.1 ENST00000658765.1 ENST00000665184.1 |
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| CDS CAA 90 bp | ACAGAACAAAATTCAATGCAGGTTCTCTTTCATTCAGGAAGTGTTTaGGGCCTCATGATTATTTTATGTTCCAGACCCTGTGATAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TEQNSMQVLFHSGSV*GLMIILCSRPCDSC Trigger: GCAGCTATCACAGGGTCTGGAACATAAAATAATCATGAGGCCCAAAACACTTCCTGAATGAAAGAGAACCTGCATTGAATTTTGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657263.1 ENST00000660206.1 ENST00000662462.1 ENST00000665718.1 |
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| CDS CAA 90 bp | AAGGATGAGGTTGACTTTATATGGGCCTCGGAGAATGACTTACATTaGAATAAGAATCAAATGAGAGATTCCAACATGGATACCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KDEVDFIWASENDLH*NKNQMRDSNMDTLG Trigger: TCCCAGGGTATCCATGTTGGAATCTCTCATTTGATTCTTATTCAAATGTAAGTCATTCTCCGAGGCCCATATAAAGTCAACCTCATCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662462.1 ENST00000666707.1 ENST00000667595.1 |
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| CDS CAA 72 bp | AAGGTGACACTCCCCCTTCTTGTTTCAGCTTTCTTATaGCAAACATGTGTCCTTTACATGGTCTATTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KVTLPLLVSAFL*QTCVLYMVYLV Trigger: CACTAAATAGACCATGTAAAGGACACATGTTTGCAATAAGAAAGCTGAAACAAGAAGGGGGAGTGTCACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 34 transcripts: ENST00000589450.5 ENST00000652886.1 ENST00000654274.1 ENST00000654844.1 ENST00000655080.1 ENST00000655602.1 ENST00000657263.1 ENST00000657626.1 ENST00000659011.1 ENST00000659119.1 ENST00000660045.1 ENST00000660206.1 ENST00000660935.1 ENST00000661664.1 ENST00000662429.1 ENST00000662462.1 ENST00000662839.1 ENST00000663160.1 ENST00000663271.1 ENST00000663675.1 ENST00000663754.1 ENST00000664682.1 ENST00000665184.1 ENST00000665510.1 ENST00000665718.1 ENST00000666707.1 ENST00000667595.1 ENST00000667821.1 ENST00000668250.1 ENST00000668293.1 ENST00000669280.1 ENST00000669356.1 ENST00000670330.1 ENST00000670523.1 |
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| CDS TCA 72 bp | GAAGTTAAATTACCTATAGGAGGCTGGATGCTCCTGTaGAGTACGTCTTTTATCTACTTGCTATCTTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: EVKLPIGGWMLL*STSFIYLLSLQ Trigger: TTGCAAAGATAGCAAGTAGATAAAAGACGTACTTCACAGGAGCATCCAGCCTCCTATAGGTAATTTAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663271.1 |
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| CDS TCA 72 bp | CAAGGAAATGGAAGATCAGTTTCAAATCCATCTCCCTaGACAACTAAAAATAGAGGTTTCTACAGCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGNGRSVSNPSP*TTKNRGFYSRE Trigger: TTCCCTGCTGTAGAAACCTCTATTTTTAGTTGTTCAGGGAGATGGATTTGAAACTGATCTTCCATTTCCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670007.1 |
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| CDS GCA 72 bp | AAACATACAGCTGAAGTGCTGTGTAGTGTTTCTATGTaGAAGAAGGCTGGGATGTACCTAATGAAGAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: KHTAEVLCSVSM*KKAGMYLMKKI Trigger: TATTTTCTTCATTAGGTACATCCCAGCCTTCTTGCACATAGAAACACTACACAGCACTTCAGCTGTATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659119.1 |
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| CDS CAA 72 bp | AATTCAATGCAGGTTCTCTTTCATTCAGGAAGTGTTTaGGGCCTCATGATTATTTTATGTTCCAGACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NSMQVLFHSGSV*GLMIILCSRPC Trigger: ACAGGGTCTGGAACATAAAATAATCATGAGGCCCAAAACACTTCCTGAATGAAAGAGAACCTGCATTGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657263.1 ENST00000660206.1 ENST00000662462.1 ENST00000665718.1 |
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| CDS GCA 72 bp | GCTGGATGCTCCTGTGAAGTACGTCTTTTATCTACTTaGTATCTTTGCAATTCCTTCATGCTTTATGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: AGCSCEVRLLST*YLCNSFMLYVY Trigger: ATATACATAAAGCATGAAGGAATTGCAAAGATAGCAAGTAGATAAAAGACGTACTTCACAGGAGCATCCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663271.1 |
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| CDS CCA 72 bp | AAAACCCAAAGCTTCAAGGATGAGGTTGACTTTATATaGGCCTCGGAGAATGACTTACATTTGAATAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KTQSFKDEVDFI*ASENDLHLNKN Trigger: ATTCTTATTCAAATGTAAGTCATTCTCCGAGGCCCATATAAAGTCAACCTCATCCTTGAAGCTTTGGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666707.1 |
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