Pregenerated sensors for LINC01882 (Homo sapiens)
Ensembl gene IDs: ENSG00000260302Ensembl transcript IDs: ENST00000563722.1, ENST00000589930.3, ENST00000652793.1, ENST00000657716.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACACGCTGGCCCTCTGGACTCGCTGGTGTCGGTCGCCTGCCCCGTaGCCACATCTCCTCGGATGCCGCTTCAAGGTCGCTGAGCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: HTLALWTRWCRSPAP*PHLLGCRFKVAELR Trigger: ACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCCACGGGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 90 bp | CTCTGGAGACACACAGTGGTGCACACGCTGGCCCTCTGGACTCGCTaGTGTCGGTCGCCTGCCCCGTGGCCACATCTCCTCGGATGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LWRHTVVHTLALWTR*CRSPAPWPHLLGCR Trigger: GCGGCATCCGAGGAGATGTGGCCACGGGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 90 bp | CGGGCGTGGTGGCTGCTTCCTGAAGTCTCTGGAGACACACAGTGGTaGACACGCTGGCCCTCTGGACTCGCTGGTGTCGGTCGCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RAWWLLPEVSGDTQW*TRWPSGLAGVGRLP Trigger: GGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCACCACGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 90 bp | TGGCTGCTTCCTGAAGTCTCTGGAGACACACAGTGGTGCACACGCTaGCCCTCTGGACTCGCTGGTGTCGGTCGCCTGCCCCGTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WLLPEVSGDTQWCTR*PSGLAGVGRLPRGH Trigger: GTGGCCACGGGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 90 bp | CCTCGGGCGTGGTGGCTGCTTCCTGAAGTCTCTGGAGACACACAGTaGTGCACACGCTGGCCCTCTGGACTCGCTGGTGTCGGTCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PRAWWLLPEVSGDTQ*CTRWPSGLAGVGRL Trigger: CAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCACCACGCCCGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 90 bp | ACTCGCTGGTGTCGGTCGCCTGCCCCGTGGCCACATCTCCTCGGATaGCGCTTCAAGGTCGCTGAGCTGCGTATGAACTATTTCCCCATC | + |
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Preference number: 5 (lower is better) Translates to: TRWCRSPAPWPHLLG*RFKVAELRMNYFPI Trigger: GATGGGGAAATAGTTCATACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCCACGGGGCAGGCGACCGACACCAGCGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS TCA 90 bp | GGACGGGGCGCTCTCTCTCCAGGTGCGCACAGAGTAGAGGCCATGTaGGGACACAGGGAGGAGACATTGTCCGTGAATCAGGAAACCACC | + |
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Preference number: 5 (lower is better) Translates to: GRGALSPGAHRVEAM*GHREETLSVNQETT Trigger: GGTGGTTTCCTGATTCACGGACAATGTCTCCTCCCTGTGTCCTCACATGGCCTCTACTCTGTGCGCACCTGGAGAGAGAGCGCCCCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS TCA 90 bp | GCCTGCCCCGTGGCCACATCTCCTCGGATGCCGCTTCAAGGTCGCTaGGCTGCGTATGAACTATTTCCCCATCCACATCATCTCCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: ACPVATSPRMPLQGR*AAYELFPHPHHLLG Trigger: CCCTAGGAGATGATGTGGATGGGGAAATAGTTCATACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCCACGGGGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 90 bp | CCACGTCTCACCTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTaGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PRLTSGPSDTRAFGL*EIEVVLCPGLGGFL Trigger: CAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGGTGAGACGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS TCA 90 bp | CACCTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTGGGAGATTaGGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTTGGTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: HLWSQRHQGFRSLGD*GGFVPGIRWVLGLT Trigger: AGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS TCA 90 bp | GGCCACATCTCCTCGGATGCCGCTTCAAGGTCGCTGAGCTGCGTATaGACTATTTCCCCATCCACATCATCTCCTAGGGGGACAGTCACC | + |
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Preference number: 5 (lower is better) Translates to: GHISSDAASRSLSCV*TISPSTSSPRGTVT Trigger: GGTGACTGTCCCCCTAGGAGATGATGTGGATGGGGAAATAGTTCATACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 90 bp | AGTTTTTACCTGATGTCATTTTCTGGTCTGGGAGCCGGCCCAGGATaGCCCGTTGCCGGTGGTGGTTGTAGTTACTCTCCGCAGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFYLMSFSGLGAGPG*PVAGGGCSYSPQAP Trigger: AGGAGCCTGCGGAGAGTAACTACAACCACCACCGGCAACGGGGCATCCTGGGCCGGCTCCCAGACCAGAAAATGACATCAGGTAAAAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CCA 90 bp | AGCCTCCAGAACTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTaGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLQNSGPSDTRAFGL*EIEVVLCPGLGGFL Trigger: CAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGTTCTGGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS TCA 90 bp | GAACTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTGGGAGATTaGGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTTGGTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: ELWSQRHQGFRSLGD*GGFVPGIRWVLGLT Trigger: AGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS TCA 90 bp | GTTCTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTGGGAGATTaGGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTTGGTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: VLWSQRHQGFRSLGD*GGFVPGIRWVLGLT Trigger: AGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652793.1 |
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| CDS GCA 90 bp | CTCGGGAATGAGTGTTCGTGGGGGACTGATCTGAGGAGAACAGGCTaGCTACTTGGCCTTTCATTGTACTTCCCCAGCCGTGTGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LGNECSWGTDLRRTG*LLGLSLYFPSRVSI Trigger: GATGGACACACGGCTGGGGAAGTACAATGAAAGGCCAAGTAGGCAGCCTGTTCTCCTCAGATCAGTCCCCCACGAACACTCATTCCCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS GCA 90 bp | GCTTTTCACACCCATGCAAAAGCACACACCACCAGCATGGCTCATTaGGTAGGTGCTAACTTTGGCTGCCTCGCTGAGGGATGGCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: AFHTHAKAHTTSMAH*VGANFGCLAEGWPD Trigger: ATCAGGCCATCCCTCAGCGAGGCAGCCAAAGTTAGCACCTACGCAATGAGCCATGCTGGTGGTGTGTGCTTTTGCATGGGTGTGAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS GCA 90 bp | TACTTGGCCTTTCATTGTACTTCCCCAGCCGTGTGTCCATCTTCCTaGATTCCTGATAGGGCTGGTGACCTCATCAGAAGAGGGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: YLAFHCTSPAVCPSS*IPDRAGDLIRRGRD Trigger: GTCCCTCCCTCTTCTGATGAGGTCACCAGCCCTATCAGGAATGCAGGAAGATGGACACACGGCTGGGGAAGTACAATGAAAGGCCAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657716.1 |
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| CDS CCA 90 bp | CACACTTTCCTTGTTGCTGATGAGCCCATCAGTTTTGAGGAGGCCTaGCCCGCTATCCTCTCAGCTGGCATGTGTCTGCTGTTTTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: HTFLVADEPISFEEA*PAILSAGMCLLFFS Trigger: CGAGAAAAACAGCAGACACATGCCAGCTGAGAGGATAGCGGGCCAGGCCTCCTCAAAACTGATGGGCTCATCAGCAACAAGGAAAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CCA 90 bp | CAGAAAAAGTTCTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTaGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QKKFSGPSDTRAFGL*EIEVVLCPGLGGFL Trigger: CAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGAACTTTTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652793.1 |
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| CDS GCA 90 bp | AGCGACACCAGGGCTTTCGGTCTTTGGGAGATTGAGGTGGTTTTGTaGCCGGGATTAGGTGGGTTCTTGGTCTCACTAACTTCAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: SDTRAFGLWEIEVVL*PGLGGFLVSLTSRM Trigger: CATTCTTGAAGTTAGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000563722.1 ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS GCA 90 bp | ATAAAGGTAGCACAGACCCAAACACTGAGCAGCAGTAAGATTTACTaGAGAGTGAAAGAACAAAACCTCCACACTATGAAACGGAATCTG | + |
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Preference number: 5 (lower is better) Translates to: IKVAQTQTLSSSKIY*RVKEQNLHTMKRNL Trigger: CAGATTCCGTTTCATAGTGTGGAGGTTTTGTTCTTTCACTCTGCAGTAAATCTTACTGCTGCTCAGTGTTTGGGTCTGTGCTACCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 72 bp | CACGCTGGCCCTCTGGACTCGCTGGTGTCGGTCGCCTaGCCCGTGGCCACATCTCCTCGGATGCCGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: HAGPLDSLVSVA*PVATSPRMPLQ Trigger: TTGAAGCGGCATCCGAGGAGATGTGGCCACGGGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 72 bp | GCCCTCTGGACTCGCTGGTGTCGGTCGCCTGCCCCGTaGCCACATCTCCTCGGATGCCGCTTCAAGGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: ALWTRWCRSPAP*PHLLGCRFKVA Trigger: AGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCCACGGGGCAGGCGACCGACACCAGCGAGTCCAGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 72 bp | CACACAGTGGTGCACACGCTGGCCCTCTGGACTCGCTaGTGTCGGTCGCCTGCCCCGTGGCCACATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HTVVHTLALWTR*CRSPAPWPHLL Trigger: GAGGAGATGTGGCCACGGGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 72 bp | CCTGAAGTCTCTGGAGACACACAGTGGTGCACACGCTaGCCCTCTGGACTCGCTGGTGTCGGTCGCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PEVSGDTQWCTR*PSGLAGVGRLP Trigger: GGGCAGGCGACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CAA 72 bp | CATTTTCTGGTCTGGGAGCCGGCCCAGGATGCCCCGTaGCCGGTGGTGGTTGTAGTTACTCTCCGCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HFLVWEPAQDAP*PVVVVVTLRRL Trigger: GAGCCTGCGGAGAGTAACTACAACCACCACCGGCAACGGGGCATCCTGGGCCGGCTCCCAGACCAGAAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS GCA 72 bp | TGTCGGTCGCCTGCCCCGTGGCCACATCTCCTCGGATaGCGCTTCAAGGTCGCTGAGCTGCGTATGAACTAT | + |
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Preference number: 6 (lower is better) Translates to: CRSPAPWPHLLG*RFKVAELRMNY Trigger: ATAGTTCATACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCCACGGGGCAGGCGACCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 72 bp | TGGCTGCTTCCTGAAGTCTCTGGAGACACACAGTGGTaGACACGCTGGCCCTCTGGACTCGCTGGTGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: WLLPEVSGDTQW*TRWPSGLAGVG Trigger: ACCGACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 72 bp | TGGTGGCTGCTTCCTGAAGTCTCTGGAGACACACAGTaGTGCACACGCTGGCCCTCTGGACTCGCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: WWLLPEVSGDTQ*CTRWPSGLAGV Trigger: GACACCAGCGAGTCCAGAGGGCCAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 72 bp | CTGATGTCATTTTCTGGTCTGGGAGCCGGCCCAGGATaGCCCGTTGCCGGTGGTGGTTGTAGTTACTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LMSFSGLGAGPG*PVAGGGCSYSP Trigger: CGGAGAGTAACTACAACCACCACCGGCAACGGGGCATCCTGGGCCGGCTCCCAGACCAGAAAATGACATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CAA 90 bp | ACCTTCGCGGTGAGTGTTACAGCTCTTAAGTCTGCGCCTCCGGAGTaGTTCATTCCTCCTGGTGGGTTCGTGGTCTCCCTGGCCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TFAVSVTALKSAPPE*FIPPGGFVVSLASG Trigger: TCCTGAGGCCAGGGAGACCACGAACCCACCAGGAGGAATGAACAACTCCGGAGGCGCAGACTTAAGAGCTGTAACACTCACCGCGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS TCA 72 bp | ATCTTCCTGCATTCCTCGGGCGTGGTGGCTGCTTCCTaGAGTCTCTGGAGACACACAGTGGTGCACACGCTG | + |
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Preference number: 6 (lower is better) Translates to: IFLHSSGVVAAS*SLWRHTVVHTL Trigger: CAGCGTGTGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCACCACGCCCGAGGAATGCAGGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 72 bp | CTTCTCATCTTCCCCACGTGTTCCACGTCTCACCTCTaGTCCCAGCGACACCAGGGCTTTCGGTCTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LLIFPTCSTSHL*SQRHQGFRSLG Trigger: TCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGGTGAGACGTGGAACACGTGGGGAAGATGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CAA 90 bp | AGGAAACCACCCTCTCCAGATGCAGAGTTTAGCAGTGCCTTCATCTaGGACATCCAGCCTCCAGAACTCTGGTCCCAGCGACACCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RKPPSPDAEFSSAFI*DIQPPELWSQRHQG Trigger: GCCCTGGTGTCGCTGGGACCAGAGTTCTGGAGGCTGGATGTCCAAGATGAAGGCACTGCTAAACTCTGCATCTGGAGAGGGTGGTTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS GCA 72 bp | TGTGTCCATCTTCCTGCATTCCTCGGGCGTGGTGGCTaGTTCCTGAAGTCTCTGGAGACACACAGTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CVHLPAFLGRGG*FLKSLETHSGA Trigger: TGCACCACTGTGTGTCTCCAGAGACTTCAGGAAGCAGCCACCACGCCCGAGGAATGCAGGAAGATGGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CCA 72 bp | ACCTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTaGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: TSGPSDTRAFGL*EIEVVLCPGLG Trigger: ACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CCA 72 bp | AGTGCCTTCATCTTGGACATCCAGCCTCCAGAACTCTaGTCCCAGCGACACCAGGGCTTTCGGTCTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SAFILDIQPPEL*SQRHQGFRSLG Trigger: TCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGTTCTGGAGGCTGGATGTCCAAGATGAAGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS TCA 72 bp | TCCCAGCGACACCAGGGCTTTCGGTCTTTGGGAGATTaGGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SQRHQGFRSLGD*GGFVPGIRWVL Trigger: AAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000563722.1 ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS TCA 72 bp | TCCTCGGATGCCGCTTCAAGGTCGCTGAGCTGCGTATaGACTATTTCCCCATCCACATCATCTCCTAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSDAASRSLSCV*TISPSTSSPRG Trigger: CCCCCTAGGAGATGATGTGGATGGGGAAATAGTTCATACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS GCA 72 bp | ACCCATGCAAAAGCACACACCACCAGCATGGCTCATTaGGTAGGTGCTAACTTTGGCTGCCTCGCTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: THAKAHTTSMAH*VGANFGCLAEG Trigger: TCCCTCAGCGAGGCAGCCAAAGTTAGCACCTACGCAATGAGCCATGCTGGTGGTGTGTGCTTTTGCATGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS GCA 72 bp | GAGTGTTCGTGGGGGACTGATCTGAGGAGAACAGGCTaGCTACTTGGCCTTTCATTGTACTTCCCCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: ECSWGTDLRRTG*LLGLSLYFPSR Trigger: ACGGCTGGGGAAGTACAATGAAAGGCCAAGTAGGCAGCCTGTTCTCCTCAGATCAGTCCCCCACGAACACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS CCA 72 bp | AACTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTaGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: NSGPSDTRAFGL*EIEVVLCPGLG Trigger: ACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS CCA 72 bp | CCTCTCCAGATGCAGAGTTTAGCAGTGCCTTCATCTTaGACATCCAGCCTCCAGAACTCTGGTCCCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: PLQMQSLAVPSS*TSSLQNSGPSD Trigger: GTCGCTGGGACCAGAGTTCTGGAGGCTGGATGTCCAAGATGAAGGCACTGCTAAACTCTGCATCTGGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS CCA 72 bp | TTCTCTGGTCCCAGCGACACCAGGGCTTTCGGTCTTTaGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: FSGPSDTRAFGL*EIEVVLCPGLG Trigger: ACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGGACCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652793.1 |
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| CDS CAA 72 bp | CTCACACTTTCCTTGTTGCTGATGAGCCCATCAGTTTaGAGGAGGCCTGGCCCGCTATCCTCTCAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LTLSLLLMSPSV*RRPGPLSSQLA Trigger: TGCCAGCTGAGAGGATAGCGGGCCAGGCCTCCTCAAAACTGATGGGCTCATCAGCAACAAGGAAAGTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CAA 72 bp | GTGAGTGTTACAGCTCTTAAGTCTGCGCCTCCGGAGTaGTTCATTCCTCCTGGTGGGTTCGTGGTCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSVTALKSAPPE*FIPPGGFVVSL Trigger: CAGGGAGACCACGAACCCACCAGGAGGAATGAACAACTCCGGAGGCGCAGACTTAAGAGCTGTAACACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CAA 72 bp | CCCTCTCCAGATGCAGAGTTTAGCAGTGCCTTCATCTaGGACATCCAGCCTCCAGAACTCTGGTCCCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: PSPDAEFSSAFI*DIQPPELWSQR Trigger: TCGCTGGGACCAGAGTTCTGGAGGCTGGATGTCCAAGATGAAGGCACTGCTAAACTCTGCATCTGGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000657716.1 |
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| CDS TCA 72 bp | GTGGCCACATCTCCTCGGATGCCGCTTCAAGGTCGCTaGGCTGCGTATGAACTATTTCCCCATCCACATCAT | + |
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Preference number: 6 (lower is better) Translates to: VATSPRMPLQGR*AAYELFPHPHH Trigger: ATGATGTGGATGGGGAAATAGTTCATACGCAGCTCAGCGACCTTGAAGCGGCATCCGAGGAGATGTGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589930.3 ENST00000652793.1 |
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| CDS CAA 90 bp | CCCAGCGACACCAGGGCTTTCGGTCTTTGGGAGATTGAGGTGGTTTaGTGCCCGGGATTAGGTGGGTTCTTGGTCTCACTAACTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PSDTRAFGLWEIEVV*CPGLGGFLVSLTSR Trigger: TCTTGAAGTTAGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGTGTCGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000563722.1 ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS CAA 72 bp | ACCAGGGCTTTCGGTCTTTGGGAGATTGAGGTGGTTTaGTGCCCGGGATTAGGTGGGTTCTTGGTCTCACTA | + |
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Preference number: 6 (lower is better) Translates to: TRAFGLWEIEVV*CPGLGGFLVSL Trigger: TAGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000563722.1 ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS CAA 72 bp | GATCTGAGGAGAACAGGCTGCCTACTTGGCCTTTCATaGTACTTCCCCAGCCGTGTGTCCATCTTCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: DLRRTGCLLGLS*YFPSRVSIFLH Trigger: ATGCAGGAAGATGGACACACGGCTGGGGAAGTACAATGAAAGGCCAAGTAGGCAGCCTGTTCTCCTCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS CAA 90 bp | CTTTGGGAGATTGAGGTGGTTTTGTGCCCGGGATTAGGTGGGTTCTaGGTCTCACTAACTTCAAGAATGAAGCCGTGGACCCTCACGGTG | + |
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Preference number: 6 (lower is better) Translates to: LWEIEVVLCPGLGGF*VSLTSRMKPWTLTV Trigger: CACCGTGAGGGTCCACGGCTTCATTCTTGAAGTTAGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000563722.1 ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS GCA 72 bp | AGGGCTTTCGGTCTTTGGGAGATTGAGGTGGTTTTGTaGCCGGGATTAGGTGGGTTCTTGGTCTCACTAACT | + |
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Preference number: 6 (lower is better) Translates to: RAFGLWEIEVVL*PGLGGFLVSLT Trigger: AGTTAGTGAGACCAAGAACCCACCTAATCCCGGGCACAAAACCACCTCAATCTCCCAAAGACCGAAAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000563722.1 ENST00000589930.3 ENST00000652793.1 ENST00000657716.1 |
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| CDS GCA 72 bp | TTTCATTGTACTTCCCCAGCCGTGTGTCCATCTTCCTaGATTCCTGATAGGGCTGGTGACCTCATCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FHCTSPAVCPSS*IPDRAGDLIRR Trigger: TCTTCTGATGAGGTCACCAGCCCTATCAGGAATGCAGGAAGATGGACACACGGCTGGGGAAGTACAATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657716.1 |
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| CDS CAA 72 bp | TCAATTTCTATCAACCATTTTTACCCGCACAGCTCATaGGCTCCACCACATTCCCATCTGCGACCACCACCC | + |
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Preference number: 6 (lower is better) Translates to: SISINHFYPHSS*APPHSHLRPPP Trigger: GGGTGGTGGTCGCAGATGGGAATGTGGTGGAGCCAATGAGCTGTGCGGGTAAAAATGGTTGATAGAAATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS CAA 90 bp | AAATATACATCAATTTCTATCAACCATTTTTACCCGCACAGCTCATaGGCTCCACCACATTCCCATCTGCGACCACCACCCTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KYTSISINHFYPHSS*APPHSHLRPPPSFS Trigger: GGAGAAGGAGGGTGGTGGTCGCAGATGGGAATGTGGTGGAGCCAATGAGCTGTGCGGGTAAAAATGGTTGATAGAAATTGATGTATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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| CDS TCA 72 bp | AGAATGGCAAATTTGTCACAATTAATGAACTCATGCTaGTCCACTGTTATAACTAAAGCCCACCATTTATTC | + |
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Preference number: 6 (lower is better) Translates to: RMANLSQLMNSC*STVITKAHHLF Trigger: GAATAAATGGTGGGCTTTAGTTATAACAGTGGATCAGCATGAGTTCATTAATTGTGACAAATTTGCCATTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563722.1 |
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