Pregenerated sensors for LINC01871 (Homo sapiens)

Ensembl gene IDs: ENSG00000235576

Ensembl transcript IDs: ENST00000417930.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCATATATGCAAGAGAGACAGATCGTCCACGGCAGCGCTGCATGCTaGACCCAGGCAGCTGACTCCAGAGCTCTGTTGCTCAGCTTCGGC	+
Preference number: 5 (lower is better) Translates to: SYMQERQIVHGSAAC*TQAADSRALLLSFG Trigger: GCCGAAGCTGAGCAACAGAGCTCTGGAGTCAGCTGCCTGGGTTCAGCATGCAGCGCTGCCGTGGACGATCTGTCTCTCTTGCATATATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417930.1
CDS GCA 90 bp	GCAGCGCTGCATGCTGAACCCAGGCAGCTGACTCCAGAGCTCTGTTaGTCAGCTTCGGCCTTTGGTAGTGTGACTCCAGCTTTTCTTGTT	+
Preference number: 5 (lower is better) Translates to: AALHAEPRQLTPELC*SASAFGSVTPAFLV Trigger: AACAAGAAAAGCTGGAGTCACACTACCAAAGGCCGAAGCTGAGCAACAGAGCTCTGGAGTCAGCTGCCTGGGTTCAGCATGCAGCGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417930.1
CDS TCA 72 bp	CGTCCACGGCAGCGCTGCATGCTGAACCCAGGCAGCTaGCTCCAGAGCTCTGTTGCTCAGCTTCGGCCTTTG	+
Preference number: 6 (lower is better) Translates to: RPRQRCMLNPGS*LQSSVAQLRPL Trigger: CAAAGGCCGAAGCTGAGCAACAGAGCTCTGGAGTCAGCTGCCTGGGTTCAGCATGCAGCGCTGCCGTGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417930.1
CDS GCA 72 bp	CATGCTGAACCCAGGCAGCTGACTCCAGAGCTCTGTTaGTCAGCTTCGGCCTTTGGTAGTGTGACTCCAGCT	+
Preference number: 6 (lower is better) Translates to: HAEPRQLTPELC*SASAFGSVTPA Trigger: AGCTGGAGTCACACTACCAAAGGCCGAAGCTGAGCAACAGAGCTCTGGAGTCAGCTGCCTGGGTTCAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417930.1

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