Pregenerated sensors for LINC01868 (Homo sapiens)
Ensembl gene IDs: ENSG00000234169Ensembl transcript IDs: ENST00000414965.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGCTCTGCTCACTCTGGAGGGGCCCAGCCCTTGGTTGGAGTCTGTaGTCACCACTGGCTGCTCCTTGGCTCAATACCCACCGGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GLCSLWRGPALGWSL*SPLAAPWLNTHREA Trigger: GGCCTCCCGGTGGGTATTGAGCCAAGGAGCAGCCAGTGGTGATCACAGACTCCAACCAAGGGCTGGGCCCCTCCAGAGTGAGCAGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS GCA 90 bp | CTGGAGGGGCCCAGCCCTTGGTTGGAGTCTGTGATCACCACTGGCTaGTCCTTGGCTCAATACCCACCGGGAGGCCCTCGAGGGACCATG | + |
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Preference number: 5 (lower is better) Translates to: LEGPSPWLESVITTG*SLAQYPPGGPRGTM Trigger: CATGGTCCCTCGAGGGCCTCCCGGTGGGTATTGAGCCAAGGAGCAGCCAGTGGTGATCACAGACTCCAACCAAGGGCTGGGCCCCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CCA 90 bp | TCTTCTCCCCACAACCCTTCCTGCAGGATTGATATTTGCAGGAGCTaGCTGAGCAGGGCTCTGCTCACTCTGGAGGGGCCCAGCCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SSPHNPSCRIDICRS*LSRALLTLEGPSPW Trigger: CCAAGGGCTGGGCCCCTCCAGAGTGAGCAGAGCCCTGCTCAGCCAGCTCCTGCAAATATCAATCCTGCAGGAAGGGTTGTGGGGAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS GCA 90 bp | GCAGGTCAGTTGGTTGGAACAGTGTCTTCTCCCCACAACCCTTCCTaGAGGATTGATATTTGCAGGAGCTGGCTGAGCAGGGCTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: AGQLVGTVSSPHNPS*RIDICRSWLSRALL Trigger: GAGCAGAGCCCTGCTCAGCCAGCTCCTGCAAATATCAATCCTGCAGGAAGGGTTGTGGGGAGAAGACACTGTTCCAACCAACTGACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 90 bp | GACAAACAGAAAGCCATGGTGCAATTCAGCTCATGCCCAAGGGTCTaGGAACCAGGGGAACCGATGGTGAGATTCCCAGTCCAGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: DKQKAMVQFSSCPRV*EPGEPMVRFPVQES Trigger: AGATTCCTGGACTGGGAATCTCACCATCGGTTCCCCTGGTTCTCAGACCCTTGGGCATGAGCTGAATTGCACCATGGCTTTCTGTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CCA 90 bp | AGAGTCACGTGTAGGTTTCTAGATCCTCCAATCCAGCAGGTCAGTTaGTTGGAACAGTGTCTTCTCCCCACAACCCTTCCTGCAGGATTG | + |
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Preference number: 5 (lower is better) Translates to: RVTCRFLDPPIQQVS*LEQCLLPTTLPAGL Trigger: CAATCCTGCAGGAAGGGTTGTGGGGAGAAGACACTGTTCCAACCAACTGACCTGCTGGATTGGAGGATCTAGAAACCTACACGTGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 90 bp | AATTCAGCTCATGCCCAAGGGTCTGAGAACCAGGGGAACCGATGGTaGGATTCCCAGTCCAGGAATCTTGAAGCATTTTATCTTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: NSAHAQGSENQGNRW*DSQSRNLEAFYLGQ Trigger: CTGGCCAAGATAAAATGCTTCAAGATTCCTGGACTGGGAATCTCACCATCGGTTCCCCTGGTTCTCAGACCCTTGGGCATGAGCTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 90 bp | CTCCCCATAACAGTGCACAGACATGTGCAATTTCAGGGCTTACCGTaGCCCTACAGCCTCAGTAATGCCCAAGTTGAGATGCCTTGTATT | + |
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Preference number: 5 (lower is better) Translates to: LPITVHRHVQFQGLP*PYSLSNAQVEMPCI Trigger: AATACAAGGCATCTCAACTTGGGCATTACTGAGGCTGTAGGGTCACGGTAAGCCCTGAAATTGCACATGTCTGTGCACTGTTATGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 90 bp | GGGCCCAGCCCTTGGTTGGAGTCTGTGATCACCACTGGCTGCTCCTaGGCTCAATACCCACCGGGAGGCCCTCGAGGGACCATGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GPSPWLESVITTGCS*AQYPPGGPRGTMSW Trigger: CCAAGACATGGTCCCTCGAGGGCCTCCCGGTGGGTATTGAGCCAAGGAGCAGCCAGTGGTGATCACAGACTCCAACCAAGGGCTGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS GCA 72 bp | CCCAGCCCTTGGTTGGAGTCTGTGATCACCACTGGCTaGTCCTTGGCTCAATACCCACCGGGAGGCCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: PSPWLESVITTG*SLAQYPPGGPR Trigger: TCGAGGGCCTCCCGGTGGGTATTGAGCCAAGGAGCAGCCAGTGGTGATCACAGACTCCAACCAAGGGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 72 bp | CCTTGGTTGGAGTCTGTGATCACCACTGGCTGCTCCTaGGCTCAATACCCACCGGGAGGCCCTCGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: PWLESVITTGCS*AQYPPGGPRGT Trigger: GGTCCCTCGAGGGCCTCCCGGTGGGTATTGAGCCAAGGAGCAGCCAGTGGTGATCACAGACTCCAACCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 72 bp | AGGGCTCTGCTCACTCTGGAGGGGCCCAGCCCTTGGTaGGAGTCTGTGATCACCACTGGCTGCTCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RALLTLEGPSPW*ESVITTGCSLA Trigger: AGCCAAGGAGCAGCCAGTGGTGATCACAGACTCCAACCAAGGGCTGGGCCCCTCCAGAGTGAGCAGAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 72 bp | ACCCTTCCTGCAGGATTGATATTTGCAGGAGCTGGCTaGGCAGGGCTCTGCTCACTCTGGAGGGGCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TLPAGLIFAGAG*AGLCSLWRGPA Trigger: GGCTGGGCCCCTCCAGAGTGAGCAGAGCCCTGCTCAGCCAGCTCCTGCAAATATCAATCCTGCAGGAAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 72 bp | AACAGTGTCTTCTCCCCACAACCCTTCCTGCAGGATTaGTATTTGCAGGAGCTGGCTGAGCAGGGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NSVFSPQPFLQD*YLQELAEQGSA Trigger: AGCAGAGCCCTGCTCAGCCAGCTCCTGCAAATATCAATCCTGCAGGAAGGGTTGTGGGGAGAAGACACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS GCA 72 bp | TTGGTTGGAACAGTGTCTTCTCCCCACAACCCTTCCTaGAGGATTGATATTTGCAGGAGCTGGCTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVGTVSSPHNPS*RIDICRSWLSR Trigger: CCTGCTCAGCCAGCTCCTGCAAATATCAATCCTGCAGGAAGGGTTGTGGGGAGAAGACACTGTTCCAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS GCA 72 bp | TTAGTCAGCGTTCCCCAGACAAACAGAAAGCCATGGTaGAATTCAGCTCATGCCCAAGGGTCTGAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: LVSVPQTNRKPW*NSAHAQGSENQ Trigger: CTGGTTCTCAGACCCTTGGGCATGAGCTGAATTGCACCATGGCTTTCTGTTTGTCTGGGGAACGCTGACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 72 bp | GCTTACCGTGACCCTACAGCCTCAGTAATGCCCAAGTaGAGATGCCTTGTATTAGTCAGCGTTCCCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: AYRDPTASVMPK*RCLVLVSVPQT Trigger: TGTCTGGGGAACGCTGACTAATACAAGGCATCTCAACTTGGGCATTACTGAGGCTGTAGGGTCACGGTAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 90 bp | GTCACGTGTAGGTTTCTAGATCCTCCAATCCAGCAGGTCAGTTGGTaGGAACAGTGTCTTCTCCCCACAACCCTTCCTGCAGGATTGATA | + |
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Preference number: 6 (lower is better) Translates to: VTCRFLDPPIQQVSW*EQCLLPTTLPAGLI Trigger: TATCAATCCTGCAGGAAGGGTTGTGGGGAGAAGACACTGTTCCAACCAACTGACCTGCTGGATTGGAGGATCTAGAAACCTACACGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 72 bp | GGGGAACCGATGGTGAGATTCCCAGTCCAGGAATCTTaGAGCATTTTATCTTGGCCAGAGTCACGTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GEPMVRFPVQES*SILSWPESRVG Trigger: ACCTACACGTGACTCTGGCCAAGATAAAATGCTTCAAGATTCCTGGACTGGGAATCTCACCATCGGTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 72 bp | CATGCCCAAGGGTCTGAGAACCAGGGGAACCGATGGTaGGATTCCCAGTCCAGGAATCTTGAAGCATTTTAT | + |
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Preference number: 6 (lower is better) Translates to: HAQGSENQGNRW*DSQSRNLEAFY Trigger: ATAAAATGCTTCAAGATTCCTGGACTGGGAATCTCACCATCGGTTCCCCTGGTTCTCAGACCCTTGGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS TCA 72 bp | ACAGTGCACAGACATGTGCAATTTCAGGGCTTACCGTaGCCCTACAGCCTCAGTAATGCCCAAGTTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: TVHRHVQFQGLP*PYSLSNAQVEM Trigger: CATCTCAACTTGGGCATTACTGAGGCTGTAGGGTCACGGTAAGCCCTGAAATTGCACATGTCTGTGCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CCA 72 bp | TGTAGGTTTCTAGATCCTCCAATCCAGCAGGTCAGTTaGTTGGAACAGTGTCTTCTCCCCACAACCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CRFLDPPIQQVS*LEQCLLPTTLP Trigger: AGGAAGGGTTGTGGGGAGAAGACACTGTTCCAACCAACTGACCTGCTGGATTGGAGGATCTAGAAACCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 90 bp | ACCGATGGTGAGATTCCCAGTCCAGGAATCTTGAAGCATTTTATCTaGGCCAGAGTCACGTGTAGGTTTCTAGATCCTCCAATCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TDGEIPSPGILKHFI*ARVTCRFLDPPIQQ Trigger: CTGCTGGATTGGAGGATCTAGAAACCTACACGTGACTCTGGCCAAGATAAAATGCTTCAAGATTCCTGGACTGGGAATCTCACCATCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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| CDS CAA 72 bp | GAGATTCCCAGTCCAGGAATCTTGAAGCATTTTATCTaGGCCAGAGTCACGTGTAGGTTTCTAGATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EIPSPGILKHFI*ARVTCRFLDPP Trigger: TGGAGGATCTAGAAACCTACACGTGACTCTGGCCAAGATAAAATGCTTCAAGATTCCTGGACTGGGAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414965.1 |
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