Pregenerated sensors for LINC01867 (Homo sapiens)
Ensembl gene IDs: ENSG00000225444Ensembl transcript IDs: ENST00000435357.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGTCAATATTTGTTTCTCCATCTGCCTACTCCGTTGTCTCTCTTCTaGTTCCAAACTTGGAAAGGAACACAAAAAGATTCACACTTAACA | + |
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Preference number: 5 (lower is better) Translates to: SQYLFLHLPTPLSLF*FQTWKGTQKDSHLT Trigger: TGTTAAGTGTGAATCTTTTTGTGTTCCTTTCCAAGTTTGGAAGCAGAAGAGAGACAACGGAGTAGGCAGATGGAGAAACAAATATTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435357.2 |
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| CDS TCA 72 bp | AGAAGGTCATTCTATAGGGTAATAATAGACAGAGAATaGTGGAAAGACATCCAGGTGGTTCAGCCAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRSFYRVIIDRE*WKDIQVVQPGE Trigger: CTCACCTGGCTGAACCACCTGGATGTCTTTCCATCATTCTCTGTCTATTATTACCCTATAGAATGACCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435357.2 |
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| CDS CAA 72 bp | TTCTGGTTTCTGTTAGAACAGCAAATCAGTCTCATTTaGGGACTCAGCTTTAGGAATCCTATTCCAATACCA | + |
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Preference number: 6 (lower is better) Translates to: FWFLLEQQISLI*GLSFRNPIPIP Trigger: TGGTATTGGAATAGGATTCCTAAAGCTGAGTCCCAAAATGAGACTGATTTGCTGTTCTAACAGAAACCAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435357.2 |
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