Pregenerated sensors for LINC01850 (Homo sapiens)

Ensembl gene IDs: ENSG00000227708

Ensembl transcript IDs: ENST00000429916.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATGATAGTCAAACTGTTTATTGCAGCAGCTCTTTCTGCTCAGTCCTaGGGAGGTGTGGGTCACAATGGACAGGGCTGGACCAGGTCTCCC	+
Preference number: 5 (lower is better) Translates to: MIVKLFIAAALSAQS*GGVGHNGQGWTRSP Trigger: GGGAGACCTGGTCCAGCCCTGTCCATTGTGACCCACACCTCCTCAGGACTGAGCAGAAAGAGCTGCTGCAATAAACAGTTTGACTATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429916.1
CDS GCA 90 bp	TTGCTCAAACTCTGGCACTTCAGGAATGATAGTCAAACTGTTTATTaGAGCAGCTCTTTCTGCTCAGTCCTGAGGAGGTGTGGGTCACAA	+
Preference number: 5 (lower is better) Translates to: LLKLWHFRNDSQTVY*SSSFCSVLRRCGSQ Trigger: TTGTGACCCACACCTCCTCAGGACTGAGCAGAAAGAGCTGCTGCAATAAACAGTTTGACTATCATTCCTGAAGTGCCAGAGTTTGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429916.1
CDS CCA 72 bp	TTGCAGCAGCTCTTTCTGCTCAGTCCTGAGGAGGTGTaGGTCACAATGGACAGGGCTGGACCAGGTCTCCCA	+
Preference number: 6 (lower is better) Translates to: LQQLFLLSPEEV*VTMDRAGPGLP Trigger: TGGGAGACCTGGTCCAGCCCTGTCCATTGTGACCCACACCTCCTCAGGACTGAGCAGAAAGAGCTGCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429916.1
CDS TCA 72 bp	AAACTGTTTATTGCAGCAGCTCTTTCTGCTCAGTCCTaGGGAGGTGTGGGTCACAATGGACAGGGCTGGACC	+
Preference number: 6 (lower is better) Translates to: KLFIAAALSAQS*GGVGHNGQGWT Trigger: GGTCCAGCCCTGTCCATTGTGACCCACACCTCCTCAGGACTGAGCAGAAAGAGCTGCTGCAATAAACAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429916.1
CDS GCA 72 bp	CTCTGGCACTTCAGGAATGATAGTCAAACTGTTTATTaGAGCAGCTCTTTCTGCTCAGTCCTGAGGAGGTGT	+
Preference number: 6 (lower is better) Translates to: LWHFRNDSQTVY*SSSFCSVLRRC Trigger: ACACCTCCTCAGGACTGAGCAGAAAGAGCTGCTGCAATAAACAGTTTGACTATCATTCCTGAAGTGCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429916.1
CDS CAA 72 bp	TGTGTTCCCAATTCTGCTTTTAGAATGTTAGTACATTaGGCACGTTGTGCACTCTCTCATTTCTGCAGCACA	+
Preference number: 6 (lower is better) Translates to: CVPNSAFRMLVH*ARCALSHFCST Trigger: TGTGCTGCAGAAATGAGAGAGTGCACAACGTGCCAAATGTACTAACATTCTAAAAGCAGAATTGGGAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429916.1

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