Pregenerated sensors for LINC01836 (Homo sapiens)
Ensembl gene IDs: ENSG00000267530Ensembl transcript IDs: ENST00000586061.1, ENST00000606242.2, ENST00000654818.1, ENST00000662249.1, ENST00000665908.1, ENST00000666859.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | CAAATCCCCTTTGGTGAGGGCTGCGGCCGGCGAGGAAAGGGCGCTTaGCCCTGTCACGAAAGCAAATTCGGTCGGGTCCTCCAGAACCAC | + |
Preference number: 5 (lower is better) Translates to: QIPFGEGCGRRGKGA*PCHESKFGRVLQNH Trigger: GTGGTTCTGGAGGACCCGACCGAATTTGCTTTCGTGACAGGGTCAAGCGCCCTTTCCTCGCCGGCCGCAGCCCTCACCAAAGGGGATTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 ENST00000665908.1 ENST00000666859.1 |
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CDS CCA 90 bp | GTTCCTGCAGGGTTGTCTGGTTTGCACAGAGAGGCTGTTGGCTCCTaGACGTGGGTCCTTGGGGGACCTTCGATTTCTCGCCGGGTCCAG | + |
Preference number: 5 (lower is better) Translates to: VPAGLSGLHREAVGS*TWVLGGPSISRRVQ Trigger: CTGGACCCGGCGAGAAATCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654818.1 |
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CDS CCA 90 bp | AAGCACAGTTCCTGCAGGGTTGTCTGGTTTGCACAGAGAGGCTGTTaGCTCCTGGACGTGGGTCCTTGGGGGACCTTCGATTTCTCGCCG | + |
Preference number: 5 (lower is better) Translates to: KHSSCRVVWFAQRGC*LLDVGPWGTFDFSP Trigger: CGGCGAGAAATCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606242.2 ENST00000654818.1 |
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CDS GCA 90 bp | GGGAGGGTTGGGGGCAGTTTCCACGGTTTCTTCAAGCACAGTTCCTaGAGGGTTGTCTGGTTTGCACAGAGAGGCTGTTGGCTCCTGGAC | + |
Preference number: 5 (lower is better) Translates to: GRVGGSFHGFFKHSS*RVVWFAQRGCWLLD Trigger: GTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAACCGTGGAAACTGCCCCCAACCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000665908.1 ENST00000666859.1 |
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CDS GCA 90 bp | TTTCCACGGTTTCTTCAAGCACAGTTCCTGCAGGGTTGTCTGGTTTaGACAGAGAGGCTGTTGGCTCCTGGACGTGGGTCCTTGGGGGAC | + |
Preference number: 5 (lower is better) Translates to: FPRFLQAQFLQGCLV*TERLLAPGRGSLGD Trigger: GTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAACCGTGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000606242.2 ENST00000654818.1 ENST00000665908.1 ENST00000666859.1 |
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CDS CCA 90 bp | GGCAGTTTCCACGGTTTCTTCAAGCACAGTTCCTGCAGGGTTGTCTaGTTTGCACAGAGAGGCTGTTGGCTCCTGGACGTGGGTCCTTGG | + |
Preference number: 5 (lower is better) Translates to: GSFHGFFKHSSCRVV*FAQRGCWLLDVGPW Trigger: CCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAACCGTGGAAACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000606242.2 ENST00000654818.1 ENST00000665908.1 ENST00000666859.1 |
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CDS GCA 90 bp | TGGTATTACAAGCGCGCCCGGCCTGGAAACATCACTTTGAACACTTaGAGACCGTCCTTCCTCCTCCTGGTCATCTTCCAGATGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: WYYKRARPGNITLNT*RPSFLLLVIFQMQE Trigger: CTCCTGCATCTGGAAGATGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS TCA 90 bp | CCAAATGCTGGTATTACAAGCGCGCCCGGCCTGGAAACATCACTTTaGACACTTGCAGACCGTCCTTCCTCCTCCTGGTCATCTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: PNAGITSAPGLETSL*TLADRPSSSWSSSR Trigger: TCTGGAAGATGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACCAGCATTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS CCA 90 bp | CCATGTTTATCTCCACGGCGCAGCCTCCGGGTTCTGGAATTTTCTTaGTCACTTCCAGATATTGTAGAGAATTCCGGAAGAGCACCGCAG | + |
Preference number: 5 (lower is better) Translates to: PCLSPRRSLRVLEFS*SLPDIVENSGRAPQ Trigger: CTGCGGTGCTCTTCCGGAATTCTCTACAATATCTGGAAGTGACCAAGAAAATTCCAGAACCCGGAGGCTGCGCCGTGGAGATAAACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 ENST00000665908.1 ENST00000666859.1 |
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CDS GCA 72 bp | CCGGGCAGTGCTGCCCCTGGCGTTGGCCCCTCATTCTaGTGGTCCAGCAGTTCCTTCCCAGGTGCCCATGTT | + |
Preference number: 6 (lower is better) Translates to: PGSAAPGVGPSF*WSSSSFPGAHV Trigger: AACATGGGCACCTGGGAAGGAACTGCTGGACCAGCAGAATGAGGGGCCAACGCCAGGGGCAGCACTGCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606242.2 ENST00000654818.1 |
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CDS CAA 72 bp | ACAGTCCTCTGTGGCCGGGCAGTGCTGCCCCTGGCGTaGGCCCCTCATTCTGCTGGTCCAGCAGTTCCTTCC | + |
Preference number: 6 (lower is better) Translates to: TVLCGRAVLPLA*APHSAGPAVPS Trigger: GGAAGGAACTGCTGGACCAGCAGAATGAGGGGCCAACGCCAGGGGCAGCACTGCCCGGCCACAGAGGACTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS TCA 72 bp | TTTGGTGAGGGCTGCGGCCGGCGAGGAAAGGGCGCTTaGCCCTGTCACGAAAGCAAATTCGGTCGGGTCCTC | + |
Preference number: 6 (lower is better) Translates to: FGEGCGRRGKGA*PCHESKFGRVL Trigger: GAGGACCCGACCGAATTTGCTTTCGTGACAGGGTCAAGCGCCCTTTCCTCGCCGGCCGCAGCCCTCACCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 ENST00000665908.1 ENST00000666859.1 |
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CDS CCA 72 bp | TCTGGTTTGCACAGAGAGGCTGTTGGCTCCTGGACGTaGGTCCTTGGGGGACCTTCGATTTCTCGCCGGGTC | + |
Preference number: 6 (lower is better) Translates to: SGLHREAVGSWT*VLGGPSISRRV Trigger: GACCCGGCGAGAAATCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654818.1 |
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CDS CCA 72 bp | GGGTTGTCTGGTTTGCACAGAGAGGCTGTTGGCTCCTaGACGTGGGTCCTTGGGGGACCTTCGATTTCTCGC | + |
Preference number: 6 (lower is better) Translates to: GLSGLHREAVGS*TWVLGGPSISR Trigger: GCGAGAAATCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606242.2 ENST00000654818.1 |
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CDS CCA 72 bp | TCCTGCAGGGTTGTCTGGTTTGCACAGAGAGGCTGTTaGCTCCTGGACGTGGGTCCTTGGGGGACCTTCGAT | + |
Preference number: 6 (lower is better) Translates to: SCRVVWFAQRGC*LLDVGPWGTFD Trigger: ATCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606242.2 ENST00000654818.1 |
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CDS CAA 72 bp | TTCCTGCAGGGTTGTCTGGTTTGCACAGAGAGGCTGTaGGCTCCTGGACGTGGGTCCTTGGGGGACCTTCGA | + |
Preference number: 6 (lower is better) Translates to: FLQGCLVCTERL*APGRGSLGDLR Trigger: TCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606242.2 ENST00000654818.1 |
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CDS CAA 90 bp | CAAGCACAGTTCCTGCAGGGTTGTCTGGTTTGCACAGAGAGGCTGTaGGCTCCTGGACGTGGGTCCTTGGGGGACCTTCGATTTCTCGCC | + |
Preference number: 6 (lower is better) Translates to: QAQFLQGCLVCTERL*APGRGSLGDLRFLA Trigger: GGCGAGAAATCGAAGGTCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606242.2 ENST00000654818.1 |
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CDS CAA 90 bp | GTTTCCACGGTTTCTTCAAGCACAGTTCCTGCAGGGTTGTCTGGTTaGCACAGAGAGGCTGTTGGCTCCTGGACGTGGGTCCTTGGGGGA | + |
Preference number: 6 (lower is better) Translates to: VSTVSSSTVPAGLSG*HREAVGSWTWVLGG Trigger: TCCCCCAAGGACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAACCGTGGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000606242.2 ENST00000654818.1 ENST00000665908.1 ENST00000666859.1 |
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CDS GCA 72 bp | AAGCGCGCCCGGCCTGGAAACATCACTTTGAACACTTaGAGACCGTCCTTCCTCCTCCTGGTCATCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: KRARPGNITLNT*RPSFLLLVIFQ Trigger: CTGGAAGATGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS CAA 72 bp | CAAGCGCGCCCGGCCTGGAAACATCACTTTGAACACTaGCAGACCGTCCTTCCTCCTCCTGGTCATCTTCCA | + |
Preference number: 6 (lower is better) Translates to: QARPAWKHHFEH*QTVLPPPGHLP Trigger: TGGAAGATGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS TCA 72 bp | GGTATTACAAGCGCGCCCGGCCTGGAAACATCACTTTaGACACTTGCAGACCGTCCTTCCTCCTCCTGGTCA | + |
Preference number: 6 (lower is better) Translates to: GITSAPGLETSL*TLADRPSSSWS Trigger: TGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS GCA 72 bp | GGGGGCAGTTTCCACGGTTTCTTCAAGCACAGTTCCTaGAGGGTTGTCTGGTTTGCACAGAGAGGCTGTTGG | + |
Preference number: 6 (lower is better) Translates to: GGSFHGFFKHSS*RVVWFAQRGCW Trigger: CCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAACCGTGGAAACTGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 ENST00000665908.1 ENST00000666859.1 |
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CDS CCA 72 bp | CACGGTTTCTTCAAGCACAGTTCCTGCAGGGTTGTCTaGTTTGCACAGAGAGGCTGTTGGCTCCTGGACGTG | + |
Preference number: 6 (lower is better) Translates to: HGFFKHSSCRVV*FAQRGCWLLDV Trigger: CACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000606242.2 ENST00000654818.1 ENST00000665908.1 ENST00000666859.1 |
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CDS CAA 72 bp | TGGTATTACAAGCGCGCCCGGCCTGGAAACATCACTTaGAACACTTGCAGACCGTCCTTCCTCCTCCTGGTC | + |
Preference number: 6 (lower is better) Translates to: WYYKRARPGNIT*NTCRPSFLLLV Trigger: GACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS CAA 72 bp | GTTTCTTCAAGCACAGTTCCTGCAGGGTTGTCTGGTTaGCACAGAGAGGCTGTTGGCTCCTGGACGTGGGTC | + |
Preference number: 6 (lower is better) Translates to: VSSSTVPAGLSG*HREAVGSWTWV Trigger: GACCCACGTCCAGGAGCCAACAGCCTCTCTGTGCAAACCAGACAACCCTGCAGGAACTGTGCTTGAAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000606242.2 ENST00000654818.1 ENST00000665908.1 ENST00000666859.1 |
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CDS CAA 90 bp | CTGGTATTACAAGCGCGCCCGGCCTGGAAACATCACTTTGAACACTaGCAGACCGTCCTTCCTCCTCCTGGTCATCTTCCAGATGCAGGA | + |
Preference number: 6 (lower is better) Translates to: LVLQARPAWKHHFEH*QTVLPPPGHLPDAG Trigger: TCCTGCATCTGGAAGATGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS CAA 90 bp | CCCAAATGCTGGTATTACAAGCGCGCCCGGCCTGGAAACATCACTTaGAACACTTGCAGACCGTCCTTCCTCCTCCTGGTCATCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: PKCWYYKRARPGNIT*NTCRPSFLLLVIFQ Trigger: CTGGAAGATGACCAGGAGGAGGAAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACCAGCATTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |
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CDS CCA 72 bp | GCCTCCCAAATGCTGGTATTACAAGCGCGCCCGGCCTaGAAACATCACTTTGAACACTTGCAGACCGTCCTT | + |
Preference number: 6 (lower is better) Translates to: ASQMLVLQARPA*KHHFEHLQTVL Trigger: AAGGACGGTCTGCAAGTGTTCAAAGTGATGTTTCCAGGCCGGGCGCGCTTGTAATACCAGCATTTGGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586061.1 ENST00000606242.2 ENST00000654818.1 ENST00000662249.1 |