Pregenerated sensors for LINC01828 (Homo sapiens)
Ensembl gene IDs: ENSG00000235885Ensembl transcript IDs: ENST00000445514.1, ENST00000450294.4, ENST00000452716.5, ENST00000593336.3, ENST00000594329.5, ENST00000598583.5, ENST00000618608.1, ENST00000626583.2, ENST00000627247.2, ENST00000628692.2, ENST00000629960.2, ENST00000630617.2, ENST00000631099.1, ENST00000657551.1
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGCCCCTGTCACTGTGTCAGCGGACCTCTCTATGCCATATGGCTaGAGGAGGCACTGCAGGCTCTCCCTGTGCAAGACTGGCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QAPVTVSADLSMPYG*RRHCRLSLCKTGCH Trigger: GTGGCAGCCAGTCTTGCACAGGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGCTGACACAGTGACAGGGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 90 bp | ATGCCAGGCCCCTGTCACTGTGTCAGCGGACCTCTCTATGCCATATaGCTGCAGGAGGCACTGCAGGCTCTCCCTGTGCAAGACTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: MPGPCHCVSGPLYAI*LQEALQALPVQDWL Trigger: CAGCCAGTCTTGCACAGGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGCTGACACAGTGACAGGGGCCTGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | CAACTCCATATCAGCTCTGGGTGCACTGCTCCAGGAGGCCTTCTCTaGTCAGCTCACCCCACCCACGCTGGGTTGCTGCCTCTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QLHISSGCTAPGGLL*SAHPTHAGLLPLFS Trigger: GGAGAAGAGAGGCAGCAACCCAGCGTGGGTGGGGTGAGCTGATCAGAGAAGGCCTCCTGGAGCAGTGCACCCAGAGCTGATATGGAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS GCA 90 bp | ACTGTGTCAGCGGACCTCTCTATGCCATATGGCTGCAGGAGGCACTaGAGGCTCTCCCTGTGCAAGACTGGCTGCCACTGCTGTGACTGG | + |
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Preference number: 5 (lower is better) Translates to: TVSADLSMPYGCRRH*RLSLCKTGCHCCDW Trigger: CCAGTCACAGCAGTGGCAGCCAGTCTTGCACAGGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGCTGACACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 90 bp | TGTGTGAATGCCAGGCCCCTGTCACTGTGTCAGCGGACCTCTCTATaGCATATGGCTGCAGGAGGCACTGCAGGCTCTCCCTGTGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: CVNARPLSLCQRTSL*HMAAGGTAGSPCAR Trigger: TCTTGCACAGGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGCTGACACAGTGACAGGGGCCTGGCATTCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 90 bp | CACTGCAGGCTCTCCCTGTGCAAGACTGGCTGCCACTGCTGTGACTaGGGTACAAGGTGGGCTGGGAGCATAGAAGATGGTACCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: HCRLSLCKTGCHCCD*GTRWAGSIEDGTPS Trigger: ACTTGGGGTACCATCTTCTATGCTCCCAGCCCACCTTGTACCCCAGTCACAGCAGTGGCAGCCAGTCTTGCACAGGGAGAGCCTGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | TCAGGGAAGCCCCAGTCAGAGGAGCAGTGTTCCAGTGGGTGGGTCTaGCGTCAGGAAGGTGGATTCCATCCGACTTACAGCTGCACCAAA | + |
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Preference number: 5 (lower is better) Translates to: SGKPQSEEQCSSGWV*RQEGGFHPTYSCTK Trigger: TTTGGTGCAGCTGTAAGTCGGATGGAATCCACCTTCCTGACGTCAGACCCACCCACTGGAACACTGCTCCTCTGACTGGGGCTTCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000450294.4 ENST00000593336.3 ENST00000598583.5 ENST00000626583.2 ENST00000627247.2 ENST00000628692.2 ENST00000629960.2 ENST00000630617.2 ENST00000631099.1 |
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| CDS CCA 90 bp | GTCAGAGGAGCAGTGTTCCAGTGGGTGGGTCTGACGTCAGGAAGGTaGATTCCATCCGACTTACAGCTGCACCAAAGGCCGACTTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: VRGAVFQWVGLTSGR*IPSDLQLHQRPTLA Trigger: TGCCAAAGTCGGCCTTTGGTGCAGCTGTAAGTCGGATGGAATCCACCTTCCTGACGTCAGACCCACCCACTGGAACACTGCTCCTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450294.4 ENST00000593336.3 ENST00000618608.1 ENST00000628692.2 |
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| CDS CCA 90 bp | CACTGCTCCAGGAGGCCTTCTCTGATCAGCTCACCCCACCCACGCTaGGTTGCTGCCTCTCTTCTCCTTTGTGTTCTCAGAATCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: HCSRRPSLISSPHPR*VAASLLLCVLRISS Trigger: AGAGGAGATTCTGAGAACACAAAGGAGAAGAGAGGCAGCAACCCAGCGTGGGTGGGGTGAGCTGATCAGAGAAGGCCTCCTGGAGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS GCA 90 bp | ATCCAGCCTTTAATCTTTCCAACTCCATATCAGCTCTGGGTGCACTaGTCCAGGAGGCCTTCTCTGATCAGCTCACCCCACCCACGCTGG | + |
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Preference number: 5 (lower is better) Translates to: IQPLIFPTPYQLWVH*SRRPSLISSPHPRW Trigger: CCAGCGTGGGTGGGGTGAGCTGATCAGAGAAGGCCTCCTGGAGCAGTGCACCCAGAGCTGATATGGAGTTGGAAAGATTAAAGGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS CCA 90 bp | GTGGCCACTGTGAGAGCTGGGAAGACCACTGTGCTTCCTCCTGTATaGTTGACCAGGGCATCCCAAATGCACATAGCCCTGTCTGACTTT | + |
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Preference number: 5 (lower is better) Translates to: VATVRAGKTTVLPPV*LTRASQMHIALSDF Trigger: AAAGTCAGACAGGGCTATGTGCATTTGGGATGCCCTGGTCAACCATACAGGAGGAAGCACAGTGGTCTTCCCAGCTCTCACAGTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS CCA 90 bp | CTCATCACCATCCAGCCTTTAATCTTTCCAACTCCATATCAGCTCTaGGTGCACTGCTCCAGGAGGCCTTCTCTGATCAGCTCACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LITIQPLIFPTPYQL*VHCSRRPSLISSPH Trigger: GTGGGGTGAGCTGATCAGAGAAGGCCTCCTGGAGCAGTGCACCCAGAGCTGATATGGAGTTGGAAAGATTAAAGGCTGGATGGTGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS CCA 90 bp | CATGGTGGCATGCTTGTGCGTCAAGATGTGTACCCACCCACCCTGTaGAATGCTGGGGACATAACACAAAGGCATGCTTTGGGCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: HGGMLVRQDVYPPTL*NAGDITQRHALGCK Trigger: TTTACAGCCCAAAGCATGCCTTTGTGTTATGTCCCCAGCATTCCACAGGGTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 90 bp | CCTGAGGAGGGTCTTGAAAACATGGACACAGATGTACCCAAAACATaGTGGCATGCTTGTGCGTCAAGATGTGTACCCACCCACCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PEEGLENMDTDVPKT*WHACASRCVPTHPV Trigger: CACAGGGTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATGTTTTGGGTACATCTGTGTCCATGTTTTCAAGACCCTCCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | ATTTTCCATAGAGGTGAACTGGATTCCTTGAGGTGGGTGCAAGTGTaGTGGGGGAGCTGCAGGGTCATACTGAGCCCACTCATGGATACT | + |
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Preference number: 5 (lower is better) Translates to: IFHRGELDSLRWVQV*WGSCRVILSPLMDT Trigger: AGTATCCATGAGTGGGCTCAGTATGACCCTGCAGCTCCCCCATCACACTTGCACCCACCTCAAGGAATCCAGTTCACCTCTATGGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS TCA 90 bp | GGAGTGAGCACAGCAGTTGAGGTGAGGGGTGTTATGTCCAGTTCCTaGCAGGGACTTACTTACTGGGTATCTTATGGAATCAGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GVSTAVEVRGVMSSS*QGLTYWVSYGISSR Trigger: CCTGGAGCTGATTCCATAAGATACCCAGTAAGTAAGTCCCTGTCAGGAACTGGACATAACACCCCTCACCTCAACTGCTGTGCTCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598583.5 |
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| CDS TCA 90 bp | CACAGACTGGGTATCTTATGGAATCAGCTCCAGGGCAGGCAGTCCTaGACCTGTGTGTCCCAAAATGTATGGGGGCTGGCTAAGATCATT | + |
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Preference number: 5 (lower is better) Translates to: HRLGILWNQLQGRQS*TCVSQNVWGLAKII Trigger: AATGATCTTAGCCAGCCCCCATACATTTTGGGACACACAGGTTCAGGACTGCCTGCCCTGGAGCTGATTCCATAAGATACCCAGTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630617.2 |
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| CDS TCA 90 bp | ACAGAACAGGGGATTGTGGGGAAGACAGGGTCATTCATCATACTCTaGCAGGTGTCATTCAATCCGACAGCAGCTCTACTGTCACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TEQGIVGKTGSFIIL*QVSFNPTAALLSPS Trigger: GCTGGGTGACAGTAGAGCTGCTGTCGGATTGAATGACACCTGTCAGAGTATGATGAATGACCCTGTCTTCCCCACAATCCCCTGTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626583.2 |
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| CDS CCA 90 bp | GAGGAGGGTCTTGAAAACATGGACACAGATGTACCCAAAACATGGTaGCATGCTTGTGCGTCAAGATGTGTACCCACCCACCCTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: EEGLENMDTDVPKTW*HACASRCVPTHPVE Trigger: TTCCACAGGGTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATGTTTTGGGTACATCTGTGTCCATGTTTTCAAGACCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | GGTTGCTGCCTCTCTTCTCCTTTGTGTTCTCAGAATCTCCTCTGCTaGCTCCCTTCTTCATTATCTGTCCACATTGGACCCTCTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: GCCLSSPLCSQNLLC*LPSSLSVHIGPSLV Trigger: GACCAGAGAGGGTCCAATGTGGACAGATAATGAAGAAGGGAGTCAGCAGAGGAGATTCTGAGAACACAAAGGAGAAGAGAGGCAGCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS TCA 90 bp | TGGGAGGAGAAAGCCTTTATCGATCAGCTTCTTGTGGTGACAGAATaGACTCCCAACACTTGTGACTTCCCATGTGTGAATGCCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: WEEKAFIDQLLVVTE*TPNTCDFPCVNARP Trigger: GGGCCTGGCATTCACACATGGGAAGTCACAAGTGTTGGGAGTTCATTCTGTCACCACAAGAAGCTGATCGATAAAGGCTTTCTCCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | CTGAGGAGTCTTAAAAAGAGGCCACTATGGTGCCGTGATGTTGAATaGATGGCCTCTGTTGGCCTTGCCTCGTTAAGAATTTCTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LRSLKKRPLWCRDVE*MASVGLASLRISAG Trigger: CCCAGCAGAAATTCTTAACGAGGCAAGGCCAACAGAGGCCATTCATTCAACATCACGGCACCATAGTGGCCTCTTTTTAAGACTCCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000452716.5 ENST00000593336.3 ENST00000598583.5 ENST00000626583.2 ENST00000627247.2 ENST00000628692.2 |
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| CDS TCA 90 bp | AGTTGTTTGGGTATCTTATGGAATCAGCTCCAGGGCAGGCAGTCCTaGACCTGTGTGTCCCAAAATGTATGGGGGCTGGCTAAGATCATT | + |
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Preference number: 5 (lower is better) Translates to: SCLGILWNQLQGRQS*TCVSQNVWGLAKII Trigger: AATGATCTTAGCCAGCCCCCATACATTTTGGGACACACAGGTTCAGGACTGCCTGCCCTGGAGCTGATTCCATAAGATACCCAAACAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000628692.2 |
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| CDS TCA 90 bp | TACTTACTGGGTATCTTATGGAATCAGCTCCAGGGCAGGCAGTCCTaGACCTGTGTGTCCCAAAATGTATGGGGGCTGGCTAAGATCATT | + |
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Preference number: 5 (lower is better) Translates to: YLLGILWNQLQGRQS*TCVSQNVWGLAKII Trigger: AATGATCTTAGCCAGCCCCCATACATTTTGGGACACACAGGTTCAGGACTGCCTGCCCTGGAGCTGATTCCATAAGATACCCAGTAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598583.5 |
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| CDS GCA 90 bp | AACACTGGGCAGGGACTCAGAAATCCTGGGTTTGCAATCCTACTCTaGACCATTACTGGTTGCATGACCTTGGACCAATTCCTTTACTTC | + |
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Preference number: 5 (lower is better) Translates to: NTGQGLRNPGFAILL*TITGCMTLDQFLYF Trigger: GAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGGATTTCTGAGTCCCTGCCCAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 90 bp | TCTGCTGACTCCCTTCTTCATTATCTGTCCACATTGGACCCTCTCTaGTCATATGTCACTCTCTCCCTAGGCTGTGAATTTCTTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: SADSLLHYLSTLDPL*SYVTLSLGCEFLDS Trigger: GCTGTCAAGAAATTCACAGCCTAGGGAGAGAGTGACATATGACCAGAGAGGGTCCAATGTGGACAGATAATGAAGAAGGGAGTCAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS TCA 90 bp | TACTTCTCTCTGTCTTTCTCACTGGGTTCCTTACCTTTTGCAGTATaGCATGTAGTTTCCATTCAGGGAAGCCCCAGTCAGAGGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: YFSLSFSLGSLPFAV*HVVSIQGSPSQRSS Trigger: ACTGCTCCTCTGACTGGGGCTTCCCTGAATGGAAACTACATGTCATACTGCAAAAGGTAAGGAACCCAGTGAGAAAGACAGAGAGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450294.4 |
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| CDS GCA 90 bp | CTTTATTCTGTGTCATCACATTCTCGGGCAGCTGCCAAGTTGCTCTaGAGTACTCAATGGTATTTGTCATGTCTCCTTATGGCTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LYSVSSHSRAAAKLL*STQWYLSCLLMAGL Trigger: AAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGGCAGCTGCCCGAGAATGTGATGACACAGAATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS CCA 90 bp | TCATCACATTCTCGGGCAGCTGCCAAGTTGCTCTGCAGTACTCAATaGTATTTGTCATGTCTCCTTATGGCTGGCCTTTTTATCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSHSRAAAKLLCSTQ*YLSCLLMAGLFILA Trigger: AGCAAGGATAAAAAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGGCAGCTGCCCGAGAATGTGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS TCA 90 bp | TTGCAGATAGATGAGCAGTCCCTTGTTTCCTTGGAAACTCGGACCTaGGCATATGCAGCTTGGAATGTGCACCTTCATGTTTTCAATCGA | + |
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Preference number: 5 (lower is better) Translates to: LQIDEQSLVSLETRT*AYAAWNVHLHVFNR Trigger: TCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGGTCCGAGTTTCCAAGGAAACAAGGGACTGCTCATCTATCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000631099.1 ENST00000657551.1 |
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| CDS GCA 90 bp | TTGTCCATACTTCTCTCTGTCTTTCTCACTGGGTTCCTTACCTTTTaGAGTATGACATGTAGTTTCCATTCAGGGAAGCCCCAGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LSILLSVFLTGFLTF*SMTCSFHSGKPQSE Trigger: CTCTGACTGGGGCTTCCCTGAATGGAAACTACATGTCATACTGCAAAAGGTAAGGAACCCAGTGAGAAAGACAGAGAGAAGTATGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450294.4 |
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| CDS GCA 90 bp | TCAGAGGCCAACTTTGCAGAGTCTGAGCATATGCAGCTTGGAATGTaGACCTTCATGTTTTCAATCGAGCAGATACAGGATGAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SEANFAESEHMQLGM*TFMFSIEQIQDEFL Trigger: GAGAAACTCATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CCA 90 bp | GAAGGTGGATTCCATCCGACTTACAGCTGCACCAAAGGCCGACTTTaGCAGCAATTCCTGGGCTATAATTTTATAAACAGTCTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: EGGFHPTYSCTKGRL*QQFLGYNFINSLLF Trigger: GAAGAGAAGACTGTTTATAAAATTATAGCCCAGGAATTGCTGCCAAAGTCGGCCTTTGGTGCAGCTGTAAGTCGGATGGAATCCACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000450294.4 ENST00000618608.1 |
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| CDS CCA 90 bp | CCAAGTTGCTCTGCAGTACTCAATGGTATTTGTCATGTCTCCTTATaGCTGGCCTTTTTATCCTTGCTCAGGGTCAATCTGTTCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PSCSAVLNGICHVSL*LAFLSLLRVNLFLA Trigger: TGCCAAGAACAGATTGACCCTGAGCAAGGATAAAAAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS CCA 90 bp | CTTTCTAAGGAGTTGTCAGACAGACTCCAGAATTGTCCCAGAGAATaGGAGGAGAAAGCCTTTATCGATCAGCTTCTTGTGGTGACAGAA | + |
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Preference number: 5 (lower is better) Translates to: LSKELSDRLQNCPRE*EEKAFIDQLLVVTE Trigger: TTCTGTCACCACAAGAAGCTGATCGATAAAGGCTTTCTCCTCCCATTCTCTGGGACAATTCTGGAGTCTGTCTGACAACTCCTTAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 90 bp | TTGTTTCCTTGGAAACTCGGACCTGAGCATATGCAGCTTGGAATGTaGACCTTCATGTTTTCAATCGAGCAGATACAGGATGAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LFPWKLGPEHMQLGM*TFMFSIEQIQDEFL Trigger: GAGAAACTCATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGGTCCGAGTTTCCAAGGAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000631099.1 ENST00000657551.1 |
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| CDS GCA 90 bp | TTGGTACCAACTTTTCAGAGGCCAACTTTGCAGAGTCTGAGCATATaGAGCTTGGAATGTGCACCTTCATGTTTTCAATCGAGCAGATAC | + |
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Preference number: 5 (lower is better) Translates to: LVPTFQRPTLQSLSI*SLECAPSCFQSSRY Trigger: GTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGAAAAGTTGGTACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS GCA 90 bp | TTCCTCAAAACCTCAAAATGTTATCATGCGAGGCATCAACAGAGCTaGCAAGCCAAGGAGAAACACATCCACCAAATCCTGCAGAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: FLKTSKCYHARHQQS*QAKEKHIHQILQKV Trigger: AACTTTCTGCAGGATTTGGTGGATGTGTTTCTCCTTGGCTTGGCAGCTCTGTTGATGCCTCGCATGATAACATTTTGAGGTTTTGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 90 bp | CTCAGAAATCCTGGGTTTGCAATCCTACTCTGCACCATTACTGGTTaGATGACCTTGGACCAATTCCTTTACTTCTCTGAGGCTATGTTT | + |
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Preference number: 5 (lower is better) Translates to: LRNPGFAILLCTITG*MTLDQFLYFSEAMF Trigger: AAACATAGCCTCAGAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGGATTTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | AGCCTCATAGCATCAGGGGTTTGCTCGGCAGAAATGACAAGGCAGTaGGAATTTTTAGACTGCACACTAGAATTTGATTCAGAATCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SLIASGVCSAEMTRQ*EFLDCTLEFDSESR Trigger: CCTTGATTCTGAATCAAATTCTAGTGTGCAGTCTAAAAATTCTCACTGCCTTGTCATTTCTGCCGAGCAAACCCCTGATGCTATGAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS TCA 90 bp | GCCTTTTTATCCTTGCTCAGGGTCAATCTGTTCTTGGCAGAAAGATaGAATCTGCTCATCACCATCCAGCCTTTAATCTTTCCAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: AFLSLLRVNLFLAER*NLLITIQPLIFPTP Trigger: TGGAGTTGGAAAGATTAAAGGCTGGATGGTGATGAGCAGATTTCATCTTTCTGCCAAGAACAGATTGACCCTGAGCAAGGATAAAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS TCA 90 bp | GAAATCCTGGGTTTGCAATCCTACTCTGCACCATTACTGGTTGCATaGCCTTGGACCAATTCCTTTACTTCTCTGAGGCTATGTTTATTC | + |
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Preference number: 5 (lower is better) Translates to: EILGLQSYSAPLLVA*PWTNSFTSLRLCLF Trigger: GAATAAACATAGCCTCAGAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGGATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 90 bp | TATGAACTATTTCTTTGGCAAGCAGCCTTCCTTGGAAGAGGATGCTaGTCTTTAATGGGGGAGGTGGGTTCCTACATTTGCATTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: YELFLWQAAFLGRGC*SLMGEVGSYICIFL Trigger: AAGAAAAATGCAAATGTAGGAACCCACCTCCCCCATTAAAGAGCAGCATCCTCTTCCAAGGAAGGCTGCTTGCCAAAGAAATAGTTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 90 bp | TCCAAAACTGTGTGTTTTGATCCTTGTGTCCATTGCTTCATACATTaGAACTGCCATCCAAAGGATTGCTTGGCATCACTGAGGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SKTVCFDPCVHCFIH*NCHPKDCLASLRSL Trigger: CAAAGACCTCAGTGATGCCAAGCAATCCTTTGGATGGCAGTTCCAATGTATGAAGCAATGGACACAAGGATCAAAACACACAGTTTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS TCA 90 bp | TATGTAACTTGGTACCAACTTTTCAGAGGCCAACTTTGCAGAGTCTaGGCATATGCAGCTTGGAATGTGCACCTTCATGTTTTCAATCGA | + |
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Preference number: 5 (lower is better) Translates to: YVTWYQLFRGQLCRV*AYAAWNVHLHVFNR Trigger: TCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGAAAAGTTGGTACCAAGTTACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS TCA 90 bp | AGACAGAAACAATTCAAGGGTGCATTTTTGAGCCAGCTGTCAATATaGGTAATGAGCTTGATCCCACTGGCACTTTCTAAGGAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQKQFKGAFLSQLSI*VMSLIPLALSKELS Trigger: TGACAACTCCTTAGAAAGTGCCAGTGGGATCAAGCTCATTACTCATATTGACAGCTGGCTCAAAAATGCACCCTTGAATTGTTTCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 90 bp | TCATTTGATTCAACCCAAACCTGTCAGGATCATTGGTGTGGAGTCTaGCAGTCATCTCATAGATATCCTCTCCAGTGTCATATTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SFDSTQTCQDHWCGV*QSSHRYPLQCHILV Trigger: AACAAGAATATGACACTGGAGAGGATATCTATGAGATGACTGGCAGACTCCACACCAATGATCCTGACAGGTTTGGGTTGAATCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS GCA 90 bp | AAATATGAACTATTTCTTTGGCAAGCAGCCTTCCTTGGAAGAGGATaGTGCTCTTTAATGGGGGAGGTGGGTTCCTACATTTGCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KYELFLWQAAFLGRG*CSLMGEVGSYICIF Trigger: AAAAATGCAAATGTAGGAACCCACCTCCCCCATTAAAGAGCAGCATCCTCTTCCAAGGAAGGCTGCTTGCCAAAGAAATAGTTCATATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | GCTTGGAATGTGCACCTTCATGTTTTCAATCGAGCAGATACAGGATaGGTTTCTCCCAAGAGATTCAATATGTTGCCTTTCTTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWNVHLHVFNRADTG*VSPKRFNMLPFFSL Trigger: CAAGGAAAAGAAAGGCAACATATTGAATCTCTTGGGAGAAACTCATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000628692.2 ENST00000631099.1 ENST00000657551.1 |
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| CDS GCA 90 bp | CATTGGGTTCATGATACAATGTCTTTGAGACAAATAAGTTCTACTTaGCTGAGGAGTCTTAAAAAGAGGCCACTATGGTGCCGTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HWVHDTMSLRQISST*LRSLKKRPLWCRDV Trigger: AACATCACGGCACCATAGTGGCCTCTTTTTAAGACTCCTCAGGCAAGTAGAACTTATTTGTCTCAAAGACATTGTATCATGAACCCAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627247.2 |
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| CDS TCA 90 bp | GAATCACAGTTGTGTGTCTCACCCTCAGCCACTAAATATCATTTTTaGTGGTTATGTAACTTGGTACCAACTTTTCAGAGGCCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESQLCVSPSATKYHF*WLCNLVPTFQRPTL Trigger: CAAAGTTGGCCTCTGAAAAGTTGGTACCAAGTTACATAACCATCAAAAATGATATTTAGTGGCTGAGGGTGAGACACACAACTGTGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CCA 90 bp | AGTTTGTCTGAACACATCCAGACACAAAGCCCATCAAGATACACCTaGGCAAATCTAGATTCCTTCCTCAAAACCTCAAAATGTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSEHIQTQSPSRYT*ANLDSFLKTSKCYH Trigger: ATGATAACATTTTGAGGTTTTGAGGAAGGAATCTAGATTTGCCCAGGTGTATCTTGATGGGCTTTGTGTCTGGATGTGTTCAGACAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 90 bp | AGAAATGACAAGGCAGTGAGAATTTTTAGACTGCACACTAGAATTTaGTTCAGAATCAAGGTTTGTAACAAGCTGAAAGTGACTCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RNDKAVRIFRLHTRI*FRIKVCNKLKVTRQ Trigger: CTGACGAGTCACTTTCAGCTTGTTACAAACCTTGATTCTGAATCAAATTCTAGTGTGCAGTCTAAAAATTCTCACTGCCTTGTCATTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS GCA 90 bp | AGTACTGAGAATAACGAAACAGCCAAGGAGAAGCAAAACCAAGAGTaGTACTTCCTTTTTACCTTTCTTCTTTCCTCTCACTTTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: STENNETAKEKQNQE*YFLFTFLLSSHFLF Trigger: AAAAAGAAAGTGAGAGGAAAGAAGAAAGGTAAAAAGGAAGTAGCACTCTTGGTTTTGCTTCTCCTTGGCTGTTTCGTTATTCTCAGTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS GCA 90 bp | TGTCCAGCAATTGTAGAGTTACTAGTTAAACTATTGCCACACTGGTaGAAGCCATCTGTATCATCTGTGGTATTATTTAGTTCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPAIVELLVKLLPHW*KPSVSSVVLFSSFH Trigger: ATGAAAGGAACTAAATAATACCACAGATGATACAGATGGCTTGCACCAGTGTGGCAATAGTTTAACTAGTAACTCTACAATTGCTGGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CCA 90 bp | GATTGTCCAGCAATTGTAGAGTTACTAGTTAAACTATTGCCACACTaGTGCAAGCCATCTGTATCATCTGTGGTATTATTTAGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DCPAIVELLVKLLPH*CKPSVSSVVLFSSF Trigger: AAAGGAACTAAATAATACCACAGATGATACAGATGGCTTGCACCAGTGTGGCAATAGTTTAACTAGTAACTCTACAATTGCTGGACAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS GCA 72 bp | GCCAGGCCCCTGTCACTGTGTCAGCGGACCTCTCTATaGCATATGGCTGCAGGAGGCACTGCAGGCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARPLSLCQRTSL*HMAAGGTAGSP Trigger: GGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGCTGACACAGTGACAGGGGCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | GCGGACCTCTCTATGCCATATGGCTGCAGGAGGCACTaGAGGCTCTCCCTGTGCAAGACTGGCTGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ADLSMPYGCRRH*RLSLCKTGCHC Trigger: GCAGTGGCAGCCAGTCTTGCACAGGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 72 bp | CCCCAGTCAGAGGAGCAGTGTTCCAGTGGGTGGGTCTaGCGTCAGGAAGGTGGATTCCATCCGACTTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQSEEQCSSGWV*RQEGGFHPTYS Trigger: GCTGTAAGTCGGATGGAATCCACCTTCCTGACGTCAGACCCACCCACTGGAACACTGCTCCTCTGACTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000450294.4 ENST00000593336.3 ENST00000598583.5 ENST00000626583.2 ENST00000627247.2 ENST00000628692.2 ENST00000629960.2 ENST00000630617.2 ENST00000631099.1 |
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| CDS GCA 72 bp | GTCACTGTGTCAGCGGACCTCTCTATGCCATATGGCTaGAGGAGGCACTGCAGGCTCTCCCTGTGCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VTVSADLSMPYG*RRHCRLSLCKT Trigger: AGTCTTGCACAGGGAGAGCCTGCAGTGCCTCCTGCAGCCATATGGCATAGAGAGGTCCGCTGACACAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 72 bp | GCAGTGTTCCAGTGGGTGGGTCTGACGTCAGGAAGGTaGATTCCATCCGACTTACAGCTGCACCAAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVFQWVGLTSGR*IPSDLQLHQRP Trigger: CGGCCTTTGGTGCAGCTGTAAGTCGGATGGAATCCACCTTCCTGACGTCAGACCCACCCACTGGAACACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000450294.4 ENST00000593336.3 ENST00000598583.5 ENST00000618608.1 ENST00000626583.2 ENST00000627247.2 ENST00000628692.2 ENST00000629960.2 ENST00000630617.2 ENST00000631099.1 |
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| CDS TCA 72 bp | AGAGGTGAACTGGATTCCTTGAGGTGGGTGCAAGTGTaGTGGGGGAGCTGCAGGGTCATACTGAGCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: RGELDSLRWVQV*WGSCRVILSPL Trigger: GAGTGGGCTCAGTATGACCCTGCAGCTCCCCCATCACACTTGCACCCACCTCAAGGAATCCAGTTCACCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS TCA 72 bp | GCCCAGGGATTTTCCATAGAGGTGAACTGGATTCCTTaGGGTGGGTGCAAGTGTGATGGGGGAGCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQGFSIEVNWIP*GGCKCDGGAAG Trigger: CCCTGCAGCTCCCCCATCACACTTGCACCCACCTCAAGGAATCCAGTTCACCTCTATGGAAAATCCCTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS CCA 72 bp | AGGAGGCCTTCTCTGATCAGCTCACCCCACCCACGCTaGGTTGCTGCCTCTCTTCTCCTTTGTGTTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRPSLISSPHPR*VAASLLLCVLR Trigger: TCTGAGAACACAAAGGAGAAGAGAGGCAGCAACCCAGCGTGGGTGGGGTGAGCTGATCAGAGAAGGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS GCA 72 bp | GCCTTCTCTGATCAGCTCACCCCACCCACGCTGGGTTaGTGCCTCTCTTCTCCTTTGTGTTCTCAGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: AFSDQLTPPTLG*CLSSPLCSQNL Trigger: GAGATTCTGAGAACACAAAGGAGAAGAGAGGCAGCAACCCAGCGTGGGTGGGGTGAGCTGATCAGAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS CCA 72 bp | TTTGTGAGCCTGAGAGCTGGTGGCCACTGTGAGAGCTaGGAAGACCACTGTGCTTCCTCCTGTATGGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FVSLRAGGHCES*EDHCASSCMVD Trigger: GTCAACCATACAGGAGGAAGCACAGTGGTCTTCCCAGCTCTCACAGTGGCCACCAGCTCTCAGGCTCACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS CCA 72 bp | CCCCCAATCATCAGGCACTGCAGGGGGTTTGGTAGTTaGCAGTCTGGTCCTACACTCCATCTGTCTAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPIIRHCRGFGS*QSGPTLHLSNP Trigger: GGGATTAGACAGATGGAGTGTAGGACCAGACTGCCAACTACCAAACCCCCTGCAGTGCCTGATGATTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000626583.2 |
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| CDS GCA 72 bp | ATTAGAGTGCACAACCCAGGAAAATCCCTGCCCAACTaGCAGCCTCATAGCATCAGGGGTTTGCTCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IRVHNPGKSLPN*QPHSIRGLLGR Trigger: TCTGCCGAGCAAACCCCTGATGCTATGAGGCTGGCAGTTGGGCAGGGATTTTCCTGGGTTGTGCACTCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS GCA 72 bp | TTCTCTGATCAGCTCACCCCACCCACGCTGGGTTGCTaGCTCTCTTCTCCTTTGTGTTCTCAGAATCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSDQLTPPTLGC*LSSPLCSQNLL Trigger: GAGGAGATTCTGAGAACACAAAGGAGAAGAGAGGCAGCAACCCAGCGTGGGTGGGGTGAGCTGATCAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS CAA 90 bp | GCCACTGTGAGAGCTGGGAAGACCACTGTGCTTCCTCCTGTATGGTaGACCAGGGCATCCCAAATGCACATAGCCCTGTCTGACTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: ATVRAGKTTVLPPVW*TRASQMHIALSDFT Trigger: AGTAAAGTCAGACAGGGCTATGTGCATTTGGGATGCCCTGGTCAACCATACAGGAGGAAGCACAGTGGTCTTCCCAGCTCTCACAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS GCA 72 bp | TTAATCTTTCCAACTCCATATCAGCTCTGGGTGCACTaGTCCAGGAGGCCTTCTCTGATCAGCTCACCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LIFPTPYQLWVH*SRRPSLISSPH Trigger: GTGGGGTGAGCTGATCAGAGAAGGCCTCCTGGAGCAGTGCACCCAGAGCTGATATGGAGTTGGAAAGATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS GCA 72 bp | GGACACAGATGTACCCAAAACATGGTGGCATGCTTGTaGGTCAAGATGTGTACCCACCCACCCTGTGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: GHRCTQNMVACL*VKMCTHPPCGM Trigger: CATTCCACAGGGTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATGTTTTGGGTACATCTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 72 bp | CATGGACACAGATGTACCCAAAACATGGTGGCATGCTaGTGCGTCAAGATGTGTACCCACCCACCCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HGHRCTQNMVAC*CVKMCTHPPCG Trigger: TCCACAGGGTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATGTTTTGGGTACATCTGTGTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 72 bp | ATGCTTGTGCGTCAAGATGTGTACCCACCCACCCTGTaGAATGCTGGGGACATAACACAAAGGCATGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MLVRQDVYPPTL*NAGDITQRHAL Trigger: CAAAGCATGCCTTTGTGTTATGTCCCCAGCATTCCACAGGGTGGGTGGGTACACATCTTGACGCACAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 72 bp | TCCCTGCCCAACTGCCAGCCTCATAGCATCAGGGGTTaGCTCGGCAGAAATGACAAGGCAGTGAGAATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLPNCQPHSIRG*LGRNDKAVRIF Trigger: AAAAATTCTCACTGCCTTGTCATTTCTGCCGAGCAAACCCCTGATGCTATGAGGCTGGCAGTTGGGCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS GCA 72 bp | AAACATGGACACAGATGTACCCAAAACATGGTGGCATaGTTGTGCGTCAAGATGTGTACCCACCCACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KHGHRCTQNMVA*LCVKMCTHPPC Trigger: ACAGGGTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATGTTTTGGGTACATCTGTGTCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | TTTCTTTGGCAAGCAGCCTTCCTTGGAAGAGGATGCTaGTCTTTAATGGGGGAGGTGGGTTCCTACATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLWQAAFLGRGC*SLMGEVGSYIC Trigger: GCAAATGTAGGAACCCACCTCCCCCATTAAAGAGCAGCATCCTCTTCCAAGGAAGGCTGCTTGCCAAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 90 bp | CATTCTCGGGCAGCTGCCAAGTTGCTCTGCAGTACTCAATGGTATTaGTCATGTCTCCTTATGGCTGGCCTTTTTATCCTTGCTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HSRAAAKLLCSTQWY*SCLLMAGLFILAQG Trigger: ACCCTGAGCAAGGATAAAAAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGGCAGCTGCCCGAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS TCA 72 bp | GATGAGCAGTCCCTTGTTTCCTTGGAAACTCGGACCTaGGCATATGCAGCTTGGAATGTGCACCTTCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: DEQSLVSLETRT*AYAAWNVHLHV Trigger: AACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGGTCCGAGTTTCCAAGGAAACAAGGGACTGCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000631099.1 ENST00000657551.1 |
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| CDS GCA 72 bp | CTATTTCTTTGGCAAGCAGCCTTCCTTGGAAGAGGATaGTGCTCTTTAATGGGGGAGGTGGGTTCCTACATT | + |
|
Preference number: 6 (lower is better) Translates to: LFLWQAAFLGRG*CSLMGEVGSYI Trigger: AATGTAGGAACCCACCTCCCCCATTAAAGAGCAGCATCCTCTTCCAAGGAAGGCTGCTTGCCAAAGAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | CAGGGACTCAGAAATCCTGGGTTTGCAATCCTACTCTaGACCATTACTGGTTGCATGACCTTGGACCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: QGLRNPGFAILL*TITGCMTLDQF Trigger: GAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGGATTTCTGAGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 72 bp | AGGAGACATTTTCAGAGACAACTTGTTGCTTCTCACTaGGGCCGTTTTCGGTTGGCGCTGCTTCTCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RRHFQRQLVASH*GRFRLALLLFV Trigger: AACAAAGAGAAGCAGCGCCAACCGAAAACGGCCCCAGTGAGAAGCAACAAGTTGTCTCTGAAAATGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS CCA 72 bp | CTTGAAAACATGGACACAGATGTACCCAAAACATGGTaGCATGCTTGTGCGTCAAGATGTGTACCCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LENMDTDVPKTW*HACASRCVPTH Trigger: GTGGGTGGGTACACATCTTGACGCACAAGCATGCCACCATGTTTTGGGTACATCTGTGTCCATGTTTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 72 bp | ATACTGAGCCCACTCATGGATACTCACTTTAGGCTGTaGCCTGTTCAACAAGTCTCCCTCCCACTTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ILSPLMDTHFRL*PVQQVSLPLLV Trigger: CACAAGAAGTGGGAGGGAGACTTGTTGAACAGGCAACAGCCTAAAGTGAGTATCCATGAGTGGGCTCAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS CAA 72 bp | TCTGGCAGGGATTTCCCCTCACAGACCCCAATAGTCTaGTCCAAGATGTGCACATGTTGTCTGATATTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGRDFPSQTPIV*SKMCTCCLILG Trigger: ACCCAATATCAGACAACATGTGCACATCTTGGACAAGACTATTGGGGTCTGTGAGGGGAAATCCCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630617.2 |
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| CDS CAA 90 bp | GCAGTCCCTTGTTTCCTTGGAAACTCGGACCTGAGCATATGCAGCTaGGAATGTGCACCTTCATGTTTTCAATCGAGCAGATACAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AVPCFLGNSDLSICS*ECAPSCFQSSRYRM Trigger: CATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGGTCCGAGTTTCCAAGGAAACAAGGGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000631099.1 ENST00000657551.1 |
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| CDS CAA 90 bp | TGCAGGGTCATACTGAGCCCACTCATGGATACTCACTTTAGGCTGTaGCCTGTTCAACAAGTCTCCCTCCCACTTCTTGTGCAATTATAC | + |
|
Preference number: 6 (lower is better) Translates to: CRVILSPLMDTHFRL*PVQQVSLPLLVQLY Trigger: GTATAATTGCACAAGAAGTGGGAGGGAGACTTGTTGAACAGGCAACAGCCTAAAGTGAGTATCCATGAGTGGGCTCAGTATGACCCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS TCA 72 bp | CTGTCTTTCTCACTGGGTTCCTTACCTTTTGCAGTATaGCATGTAGTTTCCATTCAGGGAAGCCCCAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSFSLGSLPFAV*HVVSIQGSPSQ Trigger: CTGACTGGGGCTTCCCTGAATGGAAACTACATGTCATACTGCAAAAGGTAAGGAACCCAGTGAGAAAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450294.4 |
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| CDS TCA 72 bp | CTGAAAGTGACTCGTCAGTTCAGTTTTGCAGATAGATaGGCAGTCCCTTGTTTCCTTGGAAACTCGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LKVTRQFSFADR*AVPCFLGNSDL Trigger: CAGGTCCGAGTTTCCAAGGAAACAAGGGACTGCTCATCTATCTGCAAAACTGAACTGACGAGTCACTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS TCA 72 bp | CTCTCTTCTCCTTTGTGTTCTCAGAATCTCCTCTGCTaGCTCCCTTCTTCATTATCTGTCCACATTGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSPLCSQNLLC*LPSSLSVHIGP Trigger: GGGTCCAATGTGGACAGATAATGAAGAAGGGAGTCAGCAGAGGAGATTCTGAGAACACAAAGGAGAAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594329.5 ENST00000618608.1 |
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| CDS TCA 72 bp | GGGAGGAGAAAGCCTTTATCGATCAGCTTCTTGTGGTaGCAGAATGAACTCCCAACACTTGTGACTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GRRKPLSISFLW*QNELPTLVTSH Trigger: ATGGGAAGTCACAAGTGTTGGGAGTTCATTCTGTCACCACAAGAAGCTGATCGATAAAGGCTTTCTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | GTGTCATCACATTCTCGGGCAGCTGCCAAGTTGCTCTaGAGTACTCAATGGTATTTGTCATGTCTCCTTATG | + |
|
Preference number: 6 (lower is better) Translates to: VSSHSRAAAKLL*STQWYLSCLLM Trigger: CATAAGGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGGCAGCTGCCCGAGAATGTGATGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS GCA 72 bp | ATTCTGTGTCATCACATTCTCGGGCAGCTGCCAAGTTaGTCTGCAGTACTCAATGGTATTTGTCATGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILCHHILGQLPS*SAVLNGICHVS Trigger: GGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGGCAGCTGCCCGAGAATGTGATGACACAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS GCA 72 bp | TCAACCCAAACCTGTCAGGATCATTGGTGTGGAGTCTaGCAGTCATCTCATAGATATCCTCTCCAGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: STQTCQDHWCGV*QSSHRYPLQCH Trigger: ATGACACTGGAGAGGATATCTATGAGATGACTGGCAGACTCCACACCAATGATCCTGACAGGTTTGGGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS GCA 72 bp | ACCTCAAAATGTTATCATGCGAGGCATCAACAGAGCTaGCAAGCCAAGGAGAAACACATCCACCAAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: TSKCYHARHQQS*QAKEKHIHQIL Trigger: CAGGATTTGGTGGATGTGTTTCTCCTTGGCTTGGCAGCTCTGTTGATGCCTCGCATGATAACATTTTGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | CCTGGGTTTGCAATCCTACTCTGCACCATTACTGGTTaGATGACCTTGGACCAATTCCTTTACTTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PGFAILLCTITG*MTLDQFLYFSE Trigger: CTCAGAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CCA 72 bp | GAGTTGTCAGACAGACTCCAGAATTGTCCCAGAGAATaGGAGGAGAAAGCCTTTATCGATCAGCTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ELSDRLQNCPRE*EEKAFIDQLLV Trigger: CACAAGAAGCTGATCGATAAAGGCTTTCTCCTCCCATTCTCTGGGACAATTCTGGAGTCTGTCTGACAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 72 bp | CAGAGGCCAACTTTGCAGAGTCTGAGCATATGCAGCTaGGAATGTGCACCTTCATGTTTTCAATCGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QRPTLQSLSICS*ECAPSCFQSSR Trigger: TCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CAA 72 bp | AAGGTGGGCTGGGAGCATAGAAGATGGTACCCCAAGTaGTTCAATATAAAATCTAACACTGGGCAGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: KVGWEHRRWYPK*FNIKSNTGQGL Trigger: GAGTCCCTGCCCAGTGTTAGATTTTATATTGAACAACTTGGGGTACCATCTTCTATGCTCCCAGCCCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 90 bp | CCAACTTTTCAGAGGCCAACTTTGCAGAGTCTGAGCATATGCAGCTaGGAATGTGCACCTTCATGTTTTCAATCGAGCAGATACAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PTFQRPTLQSLSICS*ECAPSCFQSSRYRM Trigger: CATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGAAAAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS TCA 72 bp | TGGTACCAACTTTTCAGAGGCCAACTTTGCAGAGTCTaGGCATATGCAGCTTGGAATGTGCACCTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: WYQLFRGQLCRV*AYAAWNVHLHV Trigger: AACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGAAAAGTTGGTACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS GCA 72 bp | TGGAAACTCGGACCTGAGCATATGCAGCTTGGAATGTaGACCTTCATGTTTTCAATCGAGCAGATACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WKLGPEHMQLGM*TFMFSIEQIQD Trigger: ATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGGTCCGAGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000631099.1 ENST00000657551.1 |
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| CDS CCA 72 bp | GGCCATAAAACAGAAAAAGGCACTAACAGATCCACGTaGAGCTTGAACCCAAGACCTATTGTCTTTAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GHKTEKGTNRST*SLNPRPIVFRG Trigger: GCCTCTAAAGACAATAGGTCTTGGGTTCAAGCTCCACGTGGATCTGTTAGTGCCTTTTTCTGTTTTATGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS CAA 72 bp | GCAGCTGCCAAGTTGCTCTGCAGTACTCAATGGTATTaGTCATGTCTCCTTATGGCTGGCCTTTTTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: AAAKLLCSTQWY*SCLLMAGLFIL Trigger: AAGGATAAAAAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTGCAGAGCAACTTGGCAGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS TCA 72 bp | AAACAGAAAAAGGCACTAACAGATCCACGTGGAGCTTaGACCCAAGACCTATTGTCTTTAGAGGCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: KQKKALTDPRGA*TQDLLSLEAES Trigger: TGACTCTGCCTCTAAAGACAATAGGTCTTGGGTTCAAGCTCCACGTGGATCTGTTAGTGCCTTTTTCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS TCA 72 bp | CCTCCCCCAACGCAGAATAGGGATGGGTTTAAATTGTaGCAGGGAGGACTAGAATTAGATGTTACAAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: PPPTQNRDGFKL*QGGLELDVTKY Trigger: GTACTTTGTAACATCTAATTCTAGTCCTCCCTGTCACAATTTAAACCCATCCCTATTCTGCGTTGGGGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS TCA 72 bp | TGGTTGCATGACCTTGGACCAATTCCTTTACTTCTCTaGGGCTATGTTTATTCACAAATGGAGAATGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: WLHDLGPIPLLL*GYVYSQMENAP Trigger: GGGGGCATTCTCCATTTGTGAATAAACATAGCCTCAGAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | ACTTTTCAGAGGCCAACTTTGCAGAGTCTGAGCATATaGAGCTTGGAATGTGCACCTTCATGTTTTCAATCG | + |
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Preference number: 6 (lower is better) Translates to: TFQRPTLQSLSI*SLECAPSCFQS Trigger: CGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CCA 72 bp | TTCCATCCGACTTACAGCTGCACCAAAGGCCGACTTTaGCAGCAATTCCTGGGCTATAATTTTATAAACAGT | + |
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Preference number: 6 (lower is better) Translates to: FHPTYSCTKGRL*QQFLGYNFINS Trigger: ACTGTTTATAAAATTATAGCCCAGGAATTGCTGCCAAAGTCGGCCTTTGGTGCAGCTGTAAGTCGGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000450294.4 ENST00000618608.1 |
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| CDS CCA 72 bp | TCACTCACACCTACTTGCCATACTAGTATCAATGGATaGATCAAGATAGGAGTATGTGAGGCCTCCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SLTPTCHTSING*IKIGVCEASKS Trigger: GCTTTTGGAGGCCTCACATACTCCTATCTTGATCCATCCATTGATACTAGTATGGCAAGTAGGTGTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594329.5 |
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| CDS CCA 72 bp | TCTGCAGTACTCAATGGTATTTGTCATGTCTCCTTATaGCTGGCCTTTTTATCCTTGCTCAGGGTCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: SAVLNGICHVSL*LAFLSLLRVNL Trigger: CAGATTGACCCTGAGCAAGGATAAAAAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS CCA 72 bp | TCTGTCTTTCTCACTGGGTTCCTTACCTTTTACCTTTaGGTTACCTCTGGAGAGCAGAAACTGAGACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SVFLTGFLTFYL*VTSGEQKLRQR Trigger: TCTTTGTCTCAGTTTCTGCTCTCCAGAGGTAACCCAAAGGTAAAAGGTAAGGAACCCAGTGAGAAAGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000630617.2 ENST00000631099.1 |
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| CDS CCA 72 bp | AAATCCTGGGTTTGCAATCCTACTCTGCACCATTACTaGTTGCATGACCTTGGACCAATTCCTTTACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: KSWVCNPTLHHY*LHDLGPIPLLL Trigger: GAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 72 bp | AAAACAGAAAAAGGCACTAACAGATCCACGTGGAGCTaGAACCCAAGACCTATTGTCTTTAGAGGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: KTEKGTNRSTWS*NPRPIVFRGRV Trigger: GACTCTGCCTCTAAAGACAATAGGTCTTGGGTTCAAGCTCCACGTGGATCTGTTAGTGCCTTTTTCTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS CAA 72 bp | GCAATCCTACTCTGCACCATTACTGGTTGCATGACCTaGGACCAATTCCTTTACTTCTCTGAGGCTATGTTT | + |
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Preference number: 6 (lower is better) Translates to: AILLCTITGCMT*DQFLYFSEAMF Trigger: AAACATAGCCTCAGAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS CAA 90 bp | CCTGGGTTTGCAATCCTACTCTGCACCATTACTGGTTGCATGACCTaGGACCAATTCCTTTACTTCTCTGAGGCTATGTTTATTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: PGFAILLCTITGCMT*DQFLYFSEAMFIHK Trigger: TTTGTGAATAAACATAGCCTCAGAGAAGTAAAGGAATTGGTCCAAGGTCATGCAACCAGTAATGGTGCAGAGTAGGATTGCAAACCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 72 bp | AAAGCCTTTATCGATCAGCTTCTTGTGGTGACAGAATaGACTCCCAACACTTGTGACTTCCCATGTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KAFIDQLLVVTE*TPNTCDFPCVN Trigger: ATTCACACATGGGAAGTCACAAGTGTTGGGAGTTCATTCTGTCACCACAAGAAGCTGATCGATAAAGGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS TCA 72 bp | CAATTCAAGGGTGCATTTTTGAGCCAGCTGTCAATATaGGTAATGAGCTTGATCCCACTGGCACTTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: QFKGAFLSQLSI*VMSLIPLALSK Trigger: CTTAGAAAGTGCCAGTGGGATCAAGCTCATTACTCATATTGACAGCTGGCTCAAAAATGCACCCTTGAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657551.1 |
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| CDS GCA 72 bp | AACTTTGCAGAGTCTGAGCATATGCAGCTTGGAATGTaGACCTTCATGTTTTCAATCGAGCAGATACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: NFAESEHMQLGM*TFMFSIEQIQD Trigger: ATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CCA 72 bp | CAGTACTCAATGGTATTTGTCATGTCTCCTTATGGCTaGCCTTTTTATCCTTGCTCAGGGTCAATCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QYSMVFVMSPYG*PFYPCSGSICS Trigger: AGAACAGATTGACCCTGAGCAAGGATAAAAAGGCCAGCCATAAGGAGACATGACAAATACCATTGAGTACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618608.1 |
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| CDS CAA 72 bp | TTATGTAACTTGGTACCAACTTTTCAGAGGCCAACTTaGCAGAGTCTGAGCATATGCAGCTTGGAATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LCNLVPTFQRPT*QSLSICSLECA Trigger: TGCACATTCCAAGCTGCATATGCTCAGACTCTGCAAAGTTGGCCTCTGAAAAGTTGGTACCAAGTTACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CAA 90 bp | GAGTCTGCCAGTCATCTCATAGATATCCTCTCCAGTGTCATATTCTaGTTAGAATCACAGTTGTGTGTCTCACCCTCAGCCACTAAATAT | + |
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Preference number: 6 (lower is better) Translates to: ESASHLIDILSSVIF*LESQLCVSPSATKY Trigger: ATATTTAGTGGCTGAGGGTGAGACACACAACTGTGATTCTAACAAGAATATGACACTGGAGAGGATATCTATGAGATGACTGGCAGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS TCA 72 bp | GTGCACCTTCATGTTTTCAATCGAGCAGATACAGGATaGGTTTCTCCCAAGAGATTCAATATGTTGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VHLHVFNRADTG*VSPKRFNMLPF Trigger: GAAAGGCAACATATTGAATCTCTTGGGAGAAACTCATCCTGTATCTGCTCGATTGAAAACATGAAGGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000628692.2 ENST00000631099.1 ENST00000657551.1 |
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| CDS CAA 72 bp | GATTGTCCAGCAATTGTAGAGTTACTAGTTAAACTATaGCCACACTGGTGCAAGCCATCTGTATCATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: DCPAIVELLVKL*PHWCKPSVSSV Trigger: CACAGATGATACAGATGGCTTGCACCAGTGTGGCAATAGTTTAACTAGTAACTCTACAATTGCTGGACAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS GCA 72 bp | TATTCCAAAACTGTGTGTTTTGATCCTTGTGTCCATTaGTTCATACATTGGAACTGCCATCCAAAGGATTGC | + |
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Preference number: 6 (lower is better) Translates to: YSKTVCFDPCVH*FIHWNCHPKDC Trigger: GCAATCCTTTGGATGGCAGTTCCAATGTATGAAGCAATGGACACAAGGATCAAAACACACAGTTTTGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445514.1 |
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| CDS TCA 72 bp | TTGTGTGTCTCACCCTCAGCCACTAAATATCATTTTTaGTGGTTATGTAACTTGGTACCAACTTTTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LCVSPSATKYHF*WLCNLVPTFQR Trigger: CCTCTGAAAAGTTGGTACCAAGTTACATAACCATCAAAAATGATATTTAGTGGCTGAGGGTGAGACACACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CAA 72 bp | GAAGCTGCATTTGTTACCAAGAAGGAGCCGAAAATATaGCAATTACTATACTGCCCTTTCCCTAATTTGACT | + |
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Preference number: 6 (lower is better) Translates to: EAAFVTKKEPKI*QLLYCPFPNLT Trigger: AGTCAAATTAGGGAAAGGGCAGTATAGTAATTGCAATATTTTCGGCTCCTTCTTGGTAACAAATGCAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452716.5 ENST00000657551.1 |
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| CDS CAA 72 bp | ATCCTCTCCAGTGTCATATTCTTGTTAGAATCACAGTaGTGTGTCTCACCCTCAGCCACTAAATATCATTTT | + |
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Preference number: 6 (lower is better) Translates to: ILSSVIFLLESQ*CVSPSATKYHF Trigger: AAAATGATATTTAGTGGCTGAGGGTGAGACACACAACTGTGATTCTAACAAGAATATGACACTGGAGAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS TCA 72 bp | ATTTTCAGAGACAAATTTCAGAAAATTCTAGATGTGTaGCCAAACAGGTCAGTTTCACTCACACCTACTTGC | + |
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Preference number: 6 (lower is better) Translates to: IFRDKFQKILDV*PNRSVSLTPTC Trigger: GCAAGTAGGTGTGAGTGAAACTGACCTGTTTGGTCACACATCTAGAATTTTCTGAAATTTGTCTCTGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594329.5 |
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| CDS CCA 72 bp | GCAATTGTAGAGTTACTAGTTAAACTATTGCCACACTaGTGCAAGCCATCTGTATCATCTGTGGTATTATTT | + |
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Preference number: 6 (lower is better) Translates to: AIVELLVKLLPH*CKPSVSSVVLF Trigger: AAATAATACCACAGATGATACAGATGGCTTGCACCAGTGTGGCAATAGTTTAACTAGTAACTCTACAATTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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| CDS CAA 72 bp | AAACGTAAGCTCCCTGAGAAATCTTATCTGTCTTGTTaGTTATTATACTATATCCACAGAGCCTGGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: KRKLPEKSYLSC*LLYYIHRAWHR Trigger: TCTATGCCAGGCTCTGTGGATATAGTATAATAACAAACAAGACAGATAAGATTTCTCAGGGAGCTTACGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS TCA 72 bp | AAGGCAGTGAGAATTTTTAGACTGCACACTAGAATTTaGTTCAGAATCAAGGTTTGTAACAAGCTGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: KAVRIFRLHTRI*FRIKVCNKLKV Trigger: CACTTTCAGCTTGTTACAAACCTTGATTCTGAATCAAATTCTAGTGTGCAGTCTAAAAATTCTCACTGCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000450294.4 ENST00000452716.5 ENST00000657551.1 |
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| CDS GCA 72 bp | ATTGTAGAGTTACTAGTTAAACTATTGCCACACTGGTaGAAGCCATCTGTATCATCTGTGGTATTATTTAGT | + |
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Preference number: 6 (lower is better) Translates to: IVELLVKLLPHW*KPSVSSVVLFS Trigger: ACTAAATAATACCACAGATGATACAGATGGCTTGCACCAGTGTGGCAATAGTTTAACTAGTAACTCTACAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628692.2 |
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