Pregenerated sensors for LINC01825 (Homo sapiens)
Ensembl gene IDs: ENSG00000223466Ensembl transcript IDs: ENST00000452381.1, ENST00000665031.1, ENST00000667270.1, ENST00000671559.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCTGCCTTGGGTCTTCTTGGACTTTCAGCTCTGTCTCCTCAATCTaGGTCATTCACTGGGCTCTGCTTGGATATCTCCTCTTAGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SCLGSSWTFSSVSSI*VIHWALLGYLLLVS Trigger: TGACACTAAGAGGAGATATCCAAGCAGAGCCCAGTGAATGACCCAGATTGAGGAGACAGAGCTGAAAGTCCAAGAAGACCCAAGGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS GCA 90 bp | GGAATTCTATCTCTGCTCAGCCCTCTTTTCTCTGGTACTCGGTCTTaGAAATTCCAGCTGCCTTGGGTCTTCTTGGACTTTCAGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GILSLLSPLFSGTRS*KFQLPWVFLDFQLC Trigger: ACAGAGCTGAAAGTCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAGTACCAGAGAAAAGAGGGCTGAGCAGAGATAGAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 90 bp | CATTCACTGGGCTCTGCTTGGATATCTCCTCTTAGTGTCATGGCCTaGAAACTCTGCAAAGCAGTAAGTTGCACCTGTCATAGGGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: HSLGSAWISPLSVMA*KLCKAVSCTCHRVH Trigger: GTGAACCCTATGACAGGTGCAACTTACTGCTTTGCAGAGTTTCCAGGCCATGACACTAAGAGGAGATATCCAAGCAGAGCCCAGTGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 90 bp | TCTTCTTGGACTTTCAGCTCTGTCTCCTCAATCTGGGTCATTCACTaGGCTCTGCTTGGATATCTCCTCTTAGTGTCATGGCCTGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SSWTFSSVSSIWVIH*ALLGYLLLVSWPGN Trigger: GTTTCCAGGCCATGACACTAAGAGGAGATATCCAAGCAGAGCCCAGTGAATGACCCAGATTGAGGAGACAGAGCTGAAAGTCCAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS GCA 90 bp | TGGTTGTTCACACAAAATGACCTGTGGATAACCAAGCTACTAGCTTaGCAGGCATATCTATATTTGTTGGAACCTCGGGAGTGGGCACAA | + |
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Preference number: 5 (lower is better) Translates to: WLFTQNDLWITKLLA*QAYLYLLEPREWAQ Trigger: TTGTGCCCACTCCCGAGGTTCCAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAGGTCATTTTGTGTGAACAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CCA 90 bp | TTTACAAATCTCTGGAATTCTATCTCTGCTCAGCCCTCTTTTCTCTaGTACTCGGTCTTGCAAATTCCAGCTGCCTTGGGTCTTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: FTNLWNSISAQPSFL*YSVLQIPAALGLLG Trigger: TCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAGTACCAGAGAAAAGAGGGCTGAGCAGAGATAGAATTCCAGAGATTTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 90 bp | TTTTCCTTTCTGCCACACTTTATTCCATTTAGGCTCCTAACAGATTaGATGAGGCCCATCCACACTGGGAGGGCAATCTACTTTACTGAG | + |
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Preference number: 5 (lower is better) Translates to: FSFLPHFIPFRLLTD*MRPIHTGRAIYFTE Trigger: CTCAGTAAAGTAGATTGCCCTCCCAGTGTGGATGGGCCTCATCCAATCTGTTAGGAGCCTAAATGGAATAAAGTGTGGCAGAAAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665031.1 ENST00000667270.1 |
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| CDS TCA 90 bp | TATAAAGCAGTCGAAGAGCCTAAACAAGATGAAGTGGCAGCATGTTaGTGGAGTATATTCGAAGGTGACAAGCAGCCTTGCAGACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: YKAVEEPKQDEVAAC*WSIFEGDKQPCRQF Trigger: GAACTGTCTGCAAGGCTGCTTGTCACCTTCGAATATACTCCATCAACATGCTGCCACTTCATCTTGTTTAGGCTCTTCGACTGCTTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665031.1 ENST00000667270.1 ENST00000671559.1 |
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| CDS CCA 90 bp | CAGTGTCCTTCTATAAAGCAGTCGAAGAGCCTAAACAAGATGAAGTaGCAGCATGTTGATGGAGTATATTCGAAGGTGACAAGCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: QCPSIKQSKSLNKMK*QHVDGVYSKVTSSL Trigger: AAGGCTGCTTGTCACCTTCGAATATACTCCATCAACATGCTGCCACTTCATCTTGTTTAGGCTCTTCGACTGCTTTATAGAAGGACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665031.1 ENST00000667270.1 ENST00000671559.1 |
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| CDS TCA 90 bp | CAGGATGAATTCTTTTCTAAGGGACTCATGGTTGTTCACACAAAATaGCCTGTGGATAACCAAGCTACTAGCTTGCCAGGCATATCTATA | + |
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Preference number: 5 (lower is better) Translates to: QDEFFSKGLMVVHTK*PVDNQATSLPGISI Trigger: TATAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAGGTCATTTTGTGTGAACAACCATGAGTCCCTTAGAAAAGAATTCATCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS TCA 90 bp | TGGTGGCTTGAATTTCAGCTCTGTCACTTAGTAGCTGCCAGACTTTaGACAAGTTACTTCATCTTTGAGTCCTGGTTTCTTTATCTAATT | + |
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Preference number: 5 (lower is better) Translates to: WWLEFQLCHLVAARL*TSYFIFESWFLYLI Trigger: AATTAGATAAAGAAACCAGGACTCAAAGATGAAGTAACTTGTTCAAAGTCTGGCAGCTACTAAGTGACAGAGCTGAAATTCAAGCCACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS TCA 90 bp | GGCTGTAAAATAGTATTTTTGCCTACAGTAAACAGCCTGATGAAGTaGACAGAATATGAACCTTGTAGTTGGTGGCTTGAATTTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GCKIVFLPTVNSLMK*TEYEPCSWWLEFQL Trigger: GAGCTGAAATTCAAGCCACCAACTACAAGGTTCATATTCTGTTCACTTCATCAGGCTGTTTACTGTAGGCAAAAATACTATTTTACAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000452381.1 ENST00000667270.1 |
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| CDS CCA 90 bp | AATTCTTTTCTAAGGGACTCATGGTTGTTCACACAAAATGACCTGTaGATAACCAAGCTACTAGCTTGCCAGGCATATCTATATTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: NSFLRDSWLFTQNDL*ITKLLACQAYLYLL Trigger: CAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAGGTCATTTTGTGTGAACAACCATGAGTCCCTTAGAAAAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CAA 72 bp | TTGTGGAGCTGGCATGGGGACAAAGCAGACATGACATaGGACTCAGAGACACCACTCTCCTCTAGTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LWSWHGDKADMT*DSETPLSSSGQ Trigger: TTGGCCACTAGAGGAGAGTGGTGTCTCTGAGTCCAATGTCATGTCTGCTTTGTCCCCATGCCAGCTCCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CCA 72 bp | GGGTCTTCTTGGACTTTCAGCTCTGTCTCCTCAATCTaGGTCATTCACTGGGCTCTGCTTGGATATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GSSWTFSSVSSI*VIHWALLGYLL Trigger: GAGGAGATATCCAAGCAGAGCCCAGTGAATGACCCAGATTGAGGAGACAGAGCTGAAAGTCCAAGAAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS GCA 72 bp | TCTCTGCTCAGCCCTCTTTTCTCTGGTACTCGGTCTTaGAAATTCCAGCTGCCTTGGGTCTTCTTGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: SLLSPLFSGTRS*KFQLPWVFLDF Trigger: AAAGTCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAGTACCAGAGAAAAGAGGGCTGAGCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 72 bp | TGTCTCCTCAATCTGGGTCATTCACTGGGCTCTGCTTaGATATCTCCTCTTAGTGTCATGGCCTGGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: CLLNLGHSLGSA*ISPLSVMAWKL Trigger: GAGTTTCCAGGCCATGACACTAAGAGGAGATATCCAAGCAGAGCCCAGTGAATGACCCAGATTGAGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 72 bp | CTCGGTCTTGCAAATTCCAGCTGCCTTGGGTCTTCTTaGACTTTCAGCTCTGTCTCCTCAATCTGGGTCATT | + |
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Preference number: 6 (lower is better) Translates to: LGLANSSCLGSS*TFSSVSSIWVI Trigger: AATGACCCAGATTGAGGAGACAGAGCTGAAAGTCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 72 bp | CTGCCACACTTTATTCCATTTAGGCTCCTAACAGATTaGATGAGGCCCATCCACACTGGGAGGGCAATCTAC | + |
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Preference number: 6 (lower is better) Translates to: LPHFIPFRLLTD*MRPIHTGRAIY Trigger: GTAGATTGCCCTCCCAGTGTGGATGGGCCTCATCCAATCTGTTAGGAGCCTAAATGGAATAAAGTGTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665031.1 ENST00000667270.1 |
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| CDS CAA 72 bp | ATCTCTGCTCAGCCCTCTTTTCTCTGGTACTCGGTCTaGCAAATTCCAGCTGCCTTGGGTCTTCTTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: ISAQPSFLWYSV*QIPAALGLLGL Trigger: AAGTCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAGTACCAGAGAAAAGAGGGCTGAGCAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 72 bp | GGCTCTGCTTGGATATCTCCTCTTAGTGTCATGGCCTaGAAACTCTGCAAAGCAGTAAGTTGCACCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: GSAWISPLSVMA*KLCKAVSCTCH Trigger: ATGACAGGTGCAACTTACTGCTTTGCAGAGTTTCCAGGCCATGACACTAAGAGGAGATATCCAAGCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CCA 72 bp | TTCTCTGGTACTCGGTCTTGCAAATTCCAGCTGCCTTaGGTCTTCTTGGACTTTCAGCTCTGTCTCCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FSGTRSCKFQLP*VFLDFQLCLLN Trigger: ATTGAGGAGACAGAGCTGAAAGTCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAGTACCAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CAA 72 bp | TTTCTCTGGTACTCGGTCTTGCAAATTCCAGCTGCCTaGGGTCTTCTTGGACTTTCAGCTCTGTCTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: FLWYSVLQIPAA*GLLGLSALSPQ Trigger: TTGAGGAGACAGAGCTGAAAGTCCAAGAAGACCCAAGGCAGCTGGAATTTGCAAGACCGAGTACCAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS TCA 72 bp | GTCGAAGAGCCTAAACAAGATGAAGTGGCAGCATGTTaGTGGAGTATATTCGAAGGTGACAAGCAGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: VEEPKQDEVAAC*WSIFEGDKQPC Trigger: GCAAGGCTGCTTGTCACCTTCGAATATACTCCATCAACATGCTGCCACTTCATCTTGTTTAGGCTCTTCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665031.1 ENST00000667270.1 ENST00000671559.1 |
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| CDS CAA 90 bp | CAGCCAACTCACAGCAGGATGAATTCTTTTCTAAGGGACTCATGGTaGTTCACACAAAATGACCTGTGGATAACCAAGCTACTAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QPTHSRMNSFLRDSW*FTQNDLWITKLLAC Trigger: GCAAGCTAGTAGCTTGGTTATCCACAGGTCATTTTGTGTGAACAACCATGAGTCCCTTAGAAAAGAATTCATCCTGCTGTGAGTTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS GCA 72 bp | AGTGTCATGGCCTGGAAACTCTGCAAAGCAGTAAGTTaGACCTGTCATAGGGTTCACCTCATTTGTTTACTA | + |
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Preference number: 6 (lower is better) Translates to: SVMAWKLCKAVS*TCHRVHLICLL Trigger: TAGTAAACAAATGAGGTGAACCCTATGACAGGTGCAACTTACTGCTTTGCAGAGTTTCCAGGCCATGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS GCA 72 bp | ACACAAAATGACCTGTGGATAACCAAGCTACTAGCTTaGCAGGCATATCTATATTTGTTGGAACCTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TQNDLWITKLLA*QAYLYLLEPRE Trigger: CTCCCGAGGTTCCAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAGGTCATTTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CCA 72 bp | CTAAGGGACTCATGGTTGTTCACACAAAATGACCTGTaGATAACCAAGCTACTAGCTTGCCAGGCATATCTA | + |
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Preference number: 6 (lower is better) Translates to: LRDSWLFTQNDL*ITKLLACQAYL Trigger: TAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAGGTCATTTTGTGTGAACAACCATGAGTCCCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CAA 72 bp | ACTCAGAGACACCACTCTCCTCTAGTGGCCAAATCTTaGTGTCTGACTTCTTGTTCTGATAGGATGAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: TQRHHSPLVAKS*CLTSCSDRMSY Trigger: ATAGCTCATCCTATCAGAACAAGAAGTCAGACACAAAGATTTGGCCACTAGAGGAGAGTGGTGTCTCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CAA 90 bp | GACCTGTGGATAACCAAGCTACTAGCTTGCCAGGCATATCTATATTaGTTGGAACCTCGGGAGTGGGCACAATTTAACACAAATGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: DLWITKLLACQAYLY*LEPREWAQFNTNGN Trigger: ATTTCCATTTGTGTTAAATTGTGCCCACTCCCGAGGTTCCAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CAA 72 bp | ACCAAGCTACTAGCTTGCCAGGCATATCTATATTTGTaGGAACCTCGGGAGTGGGCACAATTTAACACAAAT | + |
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Preference number: 6 (lower is better) Translates to: TKLLACQAYLYL*EPREWAQFNTN Trigger: ATTTGTGTTAAATTGTGCCCACTCCCGAGGTTCCAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CAA 72 bp | ATAACCAAGCTACTAGCTTGCCAGGCATATCTATATTaGTTGGAACCTCGGGAGTGGGCACAATTTAACACA | + |
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Preference number: 6 (lower is better) Translates to: ITKLLACQAYLY*LEPREWAQFNT Trigger: TGTGTTAAATTGTGCCCACTCCCGAGGTTCCAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CAA 90 bp | CTGTGGATAACCAAGCTACTAGCTTGCCAGGCATATCTATATTTGTaGGAACCTCGGGAGTGGGCACAATTTAACACAAATGGAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: LWITKLLACQAYLYL*EPREWAQFNTNGNL Trigger: CAAATTTCCATTTGTGTTAAATTGTGCCCACTCCCGAGGTTCCAACAAATATAGATATGCCTGGCAAGCTAGTAGCTTGGTTATCCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS CCA 72 bp | TCTATAAAGCAGTCGAAGAGCCTAAACAAGATGAAGTaGCAGCATGTTGATGGAGTATATTCGAAGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: SIKQSKSLNKMK*QHVDGVYSKVT Trigger: TGTCACCTTCGAATATACTCCATCAACATGCTGCCACTTCATCTTGTTTAGGCTCTTCGACTGCTTTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665031.1 ENST00000667270.1 ENST00000671559.1 |
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| CDS CAA 72 bp | CCACTGCACCTGGCTTCTTCATGTTTCTTGTACGCTTaGAGTTTTGTTGAGTTTCTTGTGTCTATCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLHLASSCFLYA*SFVEFLVSILS Trigger: TGAAAGGATAGACACAAGAAACTCAACAAAACTCAAAGCGTACAAGAAACATGAAGAAGCCAGGTGCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665031.1 ENST00000667270.1 |
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| CDS CAA 72 bp | CACAGCAGGATGAATTCTTTTCTAAGGGACTCATGGTaGTTCACACAAAATGACCTGTGGATAACCAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: HSRMNSFLRDSW*FTQNDLWITKL Trigger: TAGCTTGGTTATCCACAGGTCATTTTGTGTGAACAACCATGAGTCCCTTAGAAAAGAATTCATCCTGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671559.1 |
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| CDS TCA 72 bp | GAATTTCAGCTCTGTCACTTAGTAGCTGCCAGACTTTaGACAAGTTACTTCATCTTTGAGTCCTGGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EFQLCHLVAARL*TSYFIFESWFL Trigger: AAGAAACCAGGACTCAAAGATGAAGTAACTTGTTCAAAGTCTGGCAGCTACTAAGTGACAGAGCTGAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CAA 72 bp | CTCATTTGTTTACTATCTCACAGGGATCACTTTGGTTaGTTGCCTGATGCTAGTATCTTGAGAGCTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LICLLSHRDHFG*LPDASILRAVV Trigger: AACAACAGCTCTCAAGATACTAGCATCAGGCAACAAACCAAAGTGATCCCTGTGAGATAGTAAACAAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452381.1 ENST00000665031.1 ENST00000667270.1 |
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| CDS CAA 90 bp | AAGTATGAGCCACTGCACCTGGCTTCTTCATGTTTCTTGTACGCTTaGAGTTTTGTTGAGTTTCTTGTGTCTATCCTTTCATCAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: KYEPLHLASSCFLYA*SFVEFLVSILSSNL Trigger: CAAATTTGATGAAAGGATAGACACAAGAAACTCAACAAAACTCAAAGCGTACAAGAAACATGAAGAAGCCAGGTGCAGTGGCTCATACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665031.1 ENST00000667270.1 |
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| CDS TCA 72 bp | ATAGTATTTTTGCCTACAGTAAACAGCCTGATGAAGTaGACAGAATATGAACCTTGTAGTTGGTGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: IVFLPTVNSLMK*TEYEPCSWWLE Trigger: TTCAAGCCACCAACTACAAGGTTCATATTCTGTTCACTTCATCAGGCTGTTTACTGTAGGCAAAAATACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000452381.1 ENST00000667270.1 |
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